Meyneng Mathisse, Siano Raffaele, Mouras Naina, Ansquer Dominique, Laporte‐magoni Christine, Antypas Florence, Haize Thomas, Lemonnier Hugues (2024). The Origin of the Matter Matters: The Influence of Terrestrial Inputs on Coastal Benthic Microeukaryote Communities Revealed by eDNA. Environmental Dna, 6(6), e70041 (18p.). Publisher's official version : https://doi.org/10.1002/edn3.70041 , Open Access version : https://archimer.ifremer.fr/doc/00926/103740/

Godino Sanchez Alisson, Serghine Joelle, Le Mennec Cecile, Noel Cyril, Schaeffer Julien, Goraguer Herle, Vincent Cécile, Vitre Thomas, Le Guyader Soizick, Gourmelon Michele (2024). Grey and harbor seals in France (mainland and Saint-Pierre et Miquelon): microbial communities and identification of a microbial source tracking seal marker. Frontiers in Microbiology, 15, 1484094. (17p.). Publisher's official version : https://doi.org/10.3389/fmicb.2024.1484094 , Open Access version : https://archimer.ifremer.fr/doc/00925/103668/

Militon Cécile, Michaud Emma, Sylvi Léa, Millera Ferriz Lise, Roic Enora, Gilbert Franck, Jézéquel Ronan, Cuny Philippe (2024). In situ oil contamination in young mangroves: Biodegradation of petroleum hydrocarbons and effects on the microbial and benthic communities, an experimental study in French Guiana Author links open overlay panelCécile Militon a , Emma Michaud b, Léa Sylvi a, Lis. Marine Pollution Bulletin, 209(Part. B), 117285 (19p.). https://doi.org/10.1016/j.marpolbul.2024.117285

Mouras Naina, Mounier Stéphane, Meyneng Mathisse, Antypas Florence, Haize Thomas, Oursel Benjamin, Magoni-Laporte Christine, Siano Raffaele, Lemonnier Hugues. Drivers of Dissolved Organic Matter in Estuarine Porewater Under Ultramafic Watershed Influence. Preprint IN PRESS. Publisher's official version : https://doi.org/10.2139/ssrn.4958230 , Open Access version : https://archimer.ifremer.fr/doc/00915/102666/

Bourdaud Pierre, Niquil Nathalie, Araignous Emma, Cabral Henrique, Carpentier Alexandre, Drouineau Hilaire, Lobry Jérémy, Pecquerie Laure, Saint Beat Blanche, Lassalle Géraldine, Vagner Marie (2024). Linking individual experiments and multiscale models to simulate physiological perturbations on aquatic food webs. Frontiers In Ecology And Evolution, 12, 1400936 (17p.). Publisher's official version : https://doi.org/10.3389/fevo.2024.1400936 , Open Access version : https://archimer.ifremer.fr/doc/00914/102542/

Mena Catalina, Long Marc, Lorand Ophélie, Malestroit Pascale, Rabiller Emilie, Maguer Jean-François, L Helguen Stephane, Regaudie De Gioux Aurore. Impact of light and nutrient availability on the phagotrophic activity of harmful bloom-forming dinoflagellates. Journal of Plankton Research IN PRESS. Publisher's official version : https://doi.org/10.1093/plankt/fbae038 , Open Access version : https://archimer.ifremer.fr/doc/00901/101247/

Chowdhury Subhadeep, Berthelot Hugo, Baudet Corentin, González-Santana David, Reeder Christian Furbo, L'Helguen Stéphane, Maguer Jean-François, Löscher Carolin R, Singh Arvind, Blain Stéphane, Cassar Nicolas, Bonnet Sophie, Planquette Helene, Benavides Mar (2024). Fronts divide diazotroph communities in the Southern Indian Ocean. Fems Microbiology Ecology, 100(8), fiae095 (13p.). Publisher's official version : https://doi.org/10.1093/femsec/fiae095 , Open Access version : https://archimer.ifremer.fr/doc/00900/101168/

Fouqueau L., Reynes L., Tempera Fernando, Bajjouk Touria, Blanfuné A., Chevalier C, Laurans Martial, Mauger S., Sourisseau Marc, Assis J., Lévêque L., Valero M. (2024). Seascape genetic study on Laminaria digitata underscores the critical role of sampling schemes. Marine Ecology Progress Series, 740, 23-42. Publisher's official version : https://doi.org/10.3354/meps14640 , Open Access version : https://archimer.ifremer.fr/doc/00896/100829/

Sourisseau Marc, Font‐muñoz J., Bellouche S., Fauvarque Olivier, Rouxel Justin, Tardivel Morgan, Sauvey A. (2024). Sinking rates, orientation, and behavior of pennate diatoms. Journal Of Phycology, 60(4), 806-815. Publisher's official version : https://doi.org/10.1111/jpy.13463 , Open Access version : https://archimer.ifremer.fr/doc/00891/100338/

Drouet K., Lemée R., Guilloud Emilie, Schmitt Sophie, Laza-Martinez A., Seoane S., Boutoute M., Réveillon Damien, Hervé Fabienne, Siano Raffaele, Jauzein Cecile (2024). Ecophysiological responses of Ostreopsis towards temperature: a case study of benthic HAB facing ocean warming. Harmful Algae, 135, 102648 (18p.). https://doi.org/10.1016/j.hal.2024.102648

Borremans Catherine, Durden Jennifer, Schoening Timm, Curtis Emma, Adams Luther, Branzan Albu Alexandra, Arnaubec Aurelien, Ayata Sakina-Dorothée, Baburaj Reshma, Bassin Corinne, Beck Miriam, Bigham Katharine, Boschen-Rose Rachel, Collett Chad, Contini Matteo, Correa Paulo, Dominguez-Carrió Carlos, Dreyfus Gautier, Duncan Graeme, Ferrera Maxime, Foulon Valentin, Friedman Ariell, Gaikwad Santosh, Game Chloe, Gaytán-Caballero Adriana, Girard Fanny, Giusti Michela, Hanafi-Portier Mélissa, Howell Kerry, Hulevata Iryna, Itiowe Kiamuke, Jackett Chris, Jansen Jan, Karthäuser Clarissa, Katija Kakani, Kernec Maxime, Kim Gabriel, Kitahara Marcelo, Langenkämper Daniel, Langlois Tim, Lanteri Nadine, Jianping Li Claude, Li Qi-Ran, Liabot Pierre-Olivier, Lindsay Dhugal, Loulidi Ali, Marcon Yann, Marini Simone, Marranzino Ashley, Massot-Campos Miquel, Matabos Marjolaine, Menot Lenaick, Moreno Bernabé, Morrissey Marcus, Nakath David, Nattkemper Tim, Neufeld Monika, Obst Matthias, Olu - Le Roy Karine, Parimbelli Alexa, Pasotti Francesca, Pelletier Dominique, Perhirin Margaux, Piechaud Nils, Pizarro Oscar, Purser Autun, Rodrigues Clara, Ceballos Romero Elena, Schlining Brian, Song Yifan, Sosik Heidi, Sourisseau Marc, Taormina Bastien, Taucher Jan, Thornton Blair, Van Audenhaege Loic, von Der Meden Charles, Wacquet Guillaume, Williams Jack, Witting Kea, Zurowietz Martin (2024). Report on the Marine Imaging Workshop 2022. Research Ideas and Outcomes, 10, e119782 (19p.). Publisher's official version : https://doi.org/10.3897/rio.10.e119782 , Open Access version : https://archimer.ifremer.fr/doc/00883/99473/

Mayen Jeremy, Polsenaere Pierre, Lamaud Éric, Arnaud Marie, Kostyrka Pierre, Bonnefond Jean-Marc, Geairon Philippe, Gernigon Julien, Chassagne Romain, Lacoue-Labarthe Thomas, Regaudie De Gioux Aurore, Souchu Philippe (2024). Atmospheric CO2 exchanges measured by eddy covariance over a temperate salt marsh and influence of environmental controlling factors. Biogeosciences, 21(4), 993-1016. Publisher's official version : https://doi.org/10.5194/bg-21-993-2024 , Open Access version : https://archimer.ifremer.fr/doc/00882/99396/

Roux Pauline, García-Corona José Luis, Ragueneau Stacy, Schapira Mathilde, Siano Raffaele, Pernet Fabrice, Queau Isabelle, Malestroit Pascale, Tallec Kevin, Fleury Elodie (2024). Ecophysiological response of the cupped oyster Crassostrea gigas exposed to the green dinoflagellate Lepidodinium chlorophorum. Aquaculture, 584, 740644 (14p.). Publisher's official version : https://doi.org/10.1016/j.aquaculture.2024.740644 , Open Access version : https://archimer.ifremer.fr/doc/00876/98754/

Meyneng Mathisse, Lemonnier Hugues, Le Gendre Romain, Antypas Florence, Ansquer Dominique, Serghine Joelle, Schmitt Sophie, Siano Raffaele (2024). Subtropical coastal microbiome variations due to massive river runoff after a cyclonic event. Environmental Microbiome, 19(1), 10 (24p.). Publisher's official version : https://doi.org/10.1186/s40793-024-00554-9 , Open Access version : https://archimer.ifremer.fr/doc/00875/98690/

Huguet Antoine, Barillé Laurent, Soudant Dominique, Petitgas Pierre, Gohin Francis, Lefebvre Alain (2024). Identifying the spatial pattern and the drivers of the decline in the eastern English Channel chlorophyll-a surface concentration over the last two decades. Marine Pollution Bulletin, 199, 115870 (15p.). Publisher's official version : https://doi.org/10.1016/j.marpolbul.2023.115870 , Open Access version : https://archimer.ifremer.fr/doc/00868/98034/

Chkili Oumayma, Saint Beat Blanche, Mejri Kousri Kaouther, Meddeb Marouan, Gauvin Paula, David Valérie, Safi Georges, Sakka Hlaili Asma, Niquil Nathalie (2024). Typology of planktonic food webs and associated emerging properties as indicators of the ecological status of a permanently disturbed Gulf of Gabès. Journal Of Marine Systems, 242, 103948 (19p.). Publisher's official version : https://doi.org/10.1016/j.jmarsys.2023.103948 , Open Access version : https://archimer.ifremer.fr/doc/00861/97313/

Grandremy Nina, Bourriau Paul, Daché Edwin, Danielou Marie-Madeleine, Doray Mathieu, Dupuy Christine, Forest Bertrand, Jalabert Laetitia, Huret Martin, Le Mestre Sophie, Nowaczyk Antoine, Petitgas Pierre, Pineau Philippe, Rouxel Justin, Tardivel Morgan, Romagnan Jean-Baptiste (2024). Metazoan zooplankton in the Bay of Biscay: a 16-year record of individual sizes and abundances obtained using the ZooScan and ZooCAM imaging systems. Earth System Science Data, 16(3), 1265-1282. Publisher's official version : https://doi.org/10.5194/essd-16-1265-2024 , Open Access version : https://archimer.ifremer.fr/doc/00841/95247/

Lemonnier Hugues, Siano Raffaele, And Al. (2024). Rapport de fin de contrat du projet ECOMINE financé dans le cadre du programme au fil de l’eau du CRESICA. 54 pages avec annexes.

Grasso Florent (2024). Vers une CAractérisation et Paramétrisation globale de la TURbidité dans les Estuaires sous pressions anthropiques et climatiques. Rapport final du projet CAPTURE (2021-2024). https://doi.org/10.13155/102538

Jacquet Matthias (2024). Développement d'un turbidimètre optique autonome, in situ et à bas-coût. Rapport de stage de Master Physique Fondamentale et Applications. Université de Bretagne Occidentale.

Pouvreau Stephane, Zempleni Abel, Le Roy Valerian, Huber Matthias, Petton Sébastien, Le Gall Erwan, Koechlin Hugo, Desroy Nicolas (2024). REEFOREST. REstauration Ecologique des FOrmations Récifales d'huitres plates et de leurs services EcosySTémiques. Rapport d'avancement. https://archimer.ifremer.fr/doc/00899/101056/

Le Fur Ines, Bruneau Audrey, Guesdon Stephane, Gueux Aurore, Piraud Aude, Costes Louis (2024). Qualité du Milieu Marin Littoral. Bulletin de la surveillance 2022. Départements de Charente-Maritime et de Vendée (sud). ODE/LITTORAL/LER-PC/24.001. https://archimer.ifremer.fr/doc/00882/99431/

Gallut Cyril, Liret Céline, Le Moal Marine, Pondaven Philippe, Banovski-Klein Cécile, Cadier Mathilde, Charpentier Antoine, Fustec Klervi, Le Guen Julianne, Le Roy Molène, Pichon Joëlle, Plus Martin, Schweibold Laura, Sourisseau Marc, Schnell Nalani K. (2024). Objectif Plancton : un programme de science participative pour l'étude de la diversité du plancton. In L’inventaire de la biodiversité aujourd’hui. Nouvelles méthodes et découvertes. 2024. Violaine NICOLAS (Dir.). ISBN papier : 9781784059866 ISBN ebook : 9781784069865. Chap.4, pp.43-57. https://archimer.ifremer.fr/doc/00896/100789/

Saint Beat Blanche, Nogues Quentin, Niquil Nathalie, Bourdaud Pierre, Raybaud Virginie, Goberville Eric, Beaugrand Grégory, Lasram Frida, Le Loch Francois, Schickele Alexandre (2024). Modelling species distribution, ecosystem structure and function and climate change. In Treatise on Estuarine and Coastal Science. 2nd Edition. 2024 Daniel Baird, Michael Elliott (Eds.). ISBN 9780323910422. Volume 5 : Modelling and Prediction. Part. Applications. Chap.5.12, pp.251-286 (Elsevier).

Jourdevant Youri, Cugier Philippe, Plus Martin, Regnier Brisson Laure, Le Moan Eline, Flye Sainte Marie Jonathan, Blanchet-Aurigny Aline (2024). Modelling the spatio-temporal variability of the variegated scallop Mimachlamys varia, in order to help restoration habitat effort in the bay of Brest (French Atlantic coast). AMEMR 2024 - 7th Conference of Advances in Marine Ecosystem Modelling Research. July 8 – 12, 2024, Plymouth, United Kingdom.

Van Leeuwen Sonja, Lenhart Hermann, Prins Theo, Blauw Anouk, Desmit Xavier, Fernand Liam, Friedland Rene, Kerimoglu Onur, Lacroix Genevieve, Van Der Linden Annelotte, Lefebvre Alain, Van Der Molen Johan, Plus Martin, Ruvalcaba Baroni Itzel, Silva Tiago, Stegert Christoph, Troost Tineke, Vilmin Lauriane (2024). Deriving pre-eutrophic conditions from an ensemble model approach for the North-West European Seas. AMEMR 2024 - 7th Conference of Advances in Marine Ecosystem Modelling Research. July 8 – 12, 2024, Plymouth, United Kingdom.

Arnaud Marie, Bakhos Melissa, Rumpel Cornelia, Dignac Marie-France, Norby Richard J., Bottinelli Nicolas, Deborde Jonathan, Geairon Philippe, Kostyrka Pierre, Gernigon Julien, Lemesle Jean-Christophe, Polsenaere Pierre (2024). Salt marsh organic matter quality and decomposition under sea-level rise scenarios: from leaves to fine absorptive roots. EGU General Assembly 2024. 14–19 April 2024, Vienna, Austria & Online. https://archimer.ifremer.fr/doc/00886/99752/