Remize Marine, Planchon Frederic, Loh Ai Ning, Le Grand Fabienne, Lambert Christophe, Bideau Antoine, Bidault Adeline, Corvaisier Rudolph, Volety Aswani, Soudant Philippe (2020). Identification of Polyunsaturated Fatty Acids Synthesis Pathways in the Toxic Dinophyte Alexandrium minutum Using 13C-Labelling. Biomolecules, 10(10), 1428 (21p.). Publisher's official version : , Open Access version :
Auffret Pauline, Le Luyer Jeremy, Sham Koua Manaarii, Quillien Virgile, Ky Chin-Long (2020). Tracing key genes associated with the Pinctada margaritifera albino phenotype from juvenile to cultured pearl harvest stages using multiple whole transcriptome sequencing. Bmc Genomics, 21(1), 662 (13p.). Publisher's official version : , Open Access version :
Couturier Lydie, Michel Loic, Amaro Teresa, Budge Suzanne M, Da Costa Elisabete, De Troch Marleen, Di Dato Valeria, Fink Patrick, Giraldo Carolina, Le Grand Fabienne, Loaiza Iván, Mathieu-Resuge Margaux, Nichols Peter D, Parrish Christopher C, Sardenne Fany, Vagner Marie, Pernet Fabrice, Soudant Philippe, Browman Howard State of art and best practices for fatty acid analysis in aquatic sciences. ICES Journal of Marine Science IN PRESS.
Christaki Urania, Gueneugues Audrey, Liu Yan, Blain Stephane, Catala Philippe, Colombet Jonathan, Debeljak Pavla, Jardillier Ludwig, Irion Solene, Planchon Frederic, Sassenhagen Ingrid, Sime Ngando Telesphore, Obernosterer Ingrid Seasonal microbial food web dynamics in contrasting Southern Ocean productivity regimes. Limnology and oceanography IN PRESS. Publisher's official version : , Open Access version :
Sardenne Fany, Bodin Nathalie, Medieu Anais, Antha Marisa, Arrisol Rona, Le Grand Fabienne, Bideau Antoine, Munaron Jean-Marie, Le Loc’h Francois, Chassot Emmanuel (2020). Benefit-risk associated with the consumption of fish bycatch from tropical tuna fisheries. Environmental Pollution, 267, 115614 (12p.).
Trofimova Tamara, Alexandroff Stella J., Mette Madelyn, Tray Elizabeth, Butler Paul G., Campana Steven, Harper Elizabeth, Johnson Andrew L.A., Morrongiello John R., Peharda Melita, Schone Bernd R., Andersson Carin, Andrus C. Fred T., Black Bryan A., Burchell Meghan, Carroll Michael L., Delong Kristine L., Gillanders Bronwyn M., Grønkjær Peter, Killam Daniel, Prendergast Amy L., Reynolds David J., Scourse James D., Shirai Kotaro, Thebault Julien, Trueman Clive, De Winter Niels (2020). Fundamental questions and applications of sclerochronology: Community-defined research priorities. Estuarine, Coastal and Shelf Science, 245, 106977 (18p.). Publisher's official version : , Open Access version :
Le Franc Lorane, Bernay Benoit, Petton Bruno, Since Marc, Favrel Pascal, Riviere Guillaume A functional m 6 A‐RNA methylation pathway in the oyster Crassostrea gigas assumes epitranscriptomic regulation of lophotrochozoan development. The FEBS Journal IN PRESS.
Handal William, Szostek Claire, Hold Natalie, Andrello Marco, Thiebaut Eric, Harney Ewan, Lefebvre Gwendoline, Borcier Elodie, Jolivet Aurelie, Nicolle Amandine, Boye Aurelien, Foucher Eric, Boudry Pierre, Charrier Gregory (2020). New insights on the population genetic structure of the great scallop ( Pecten maximus ) in the English Channel, coupling microsatellite data and demogenetic simulations. Aquatic Conservation-marine And Freshwater Ecosystems, 30(10), 1841-1853.
Gourtay Clemence, Chabot Denis, Audet Celine, Madec Lauriane, Huelvan Christine, Ducros Loick, Claireaux Guy, Mazurais David, Zambonino-Infante Jose-Luis (2020). Effect of thermal and nutritional conditions on fatty acid metabolism and oxidative stress response in juvenile European sea bass (Dicentrarchus labrax). Marine Biology, 167(10), 144 (14p.).
Delmotte Jean, Chaparro Cristian, Galinier Richard, De Lorgeril Julien, Petton Bruno, Stenger Pierre-Louis, Vidal-Dupiol Jeremie, Destoumieux-Garzon Delphine, Gueguen Yannick, Montagnani Caroline, Escoubas Jean Michel, Mitta Guillaume (2020). Contribution of Viral Genomic Diversity to Oyster Susceptibility in the Pacific Oyster Mortality Syndrome. Frontiers In Microbiology, 11, 1579 (17p.). Publisher's official version : , Open Access version :
Treguer Paul, Sutton Jill, Brzezinski Mark, Charette Matthew A., Devries Timothy, Dutkiewicz Stephanie, Ehlert Claudia, Hawkings Jon, Leynaert Aude, Mei Liu Su, Llopis Monferrer Natalia, Lopez Acosta Maria, Maldonado Manuel, Rahman Shaily, Ran Lihua, Rouxel Olivier Reviews and syntheses: The biogeochemical cycle of silicon in the modern ocean. Biogeosciences IN PRESS. Publisher's official version : , Open Access version :
Hermabessiere Ludovic, Receveur Justine, Himber Charlotte, Mazurais David, Huvet Arnaud, Lagarde Fabienne, Lambert Christophe, Paul-Pont Ika, Dehaut Alexandre, Jezequel Ronan, Soudant Philippe, Duflos Guillaume (2020). An Irgafos® 168 story: When the ubiquity of an additive prevents studying its leaching from plastics. Science of The Total Environment, 749, 141651 (6p.).
Ray Raghab, Thouzeau Gerard, Walcker Romain, Vantrepotte Vincent, Gleixner Gerd, Morvan Sylvain, Devesa Jeremy, Michaud Emma (2020). Mangrove‐Derived Organic and Inorganic Carbon Exchanges Between the Sinnamary Estuarine System (French Guiana, South America) and Atlantic Ocean. Journal of Geophysical Research: Biogeosciences, 125(8), e2020JG005739 (24p.).
Zubia M., Stiger-Pouvreau Valerie, Mattio Lydiane, Payri Claude E., Stewart Hannah L. (2020). A comprehensive review of the brown macroalgal genus Turbinaria J.V. Lamouroux (Fucales, Sargassaceae). Journal of Applied Phycology, 32, 2743-2760.
Mat Audrey, Sarrazin Jozee, Markov Gabriel V., Apremont Vincent, Dubreuil Christine, Eche Camille, Fabioux Caroline, Klopp Christophe, Sarradin Pierre-Marie, Tanguy Arnaud, Huvet Arnaud, Matabos Marjolaine (2020). Biological rhythms in the deep-sea hydrothermal mussel Bathymodiolus azoricus. Nature Communications, 11(1), 3454 (12p.). Publisher's official version : , Open Access version :
Trenkel Verena, Boudry Pierre, Verrez-Bagnis Veronique, Lorance Pascal Methods for identifying and interpreting sex‐linked SNP markers and carrying out sex assignment: application to thornback ray ( Raja clavata ). Molecular Ecology Resources IN PRESS.
Gardon Tony, Morvan Lucie, Huvet Arnaud, Quillien Virgile, Soyez Claude, Le Moullac Gilles, Le Luyer Jeremy (2020). Microplastics induce dose-specific transcriptomic disruptions in energy metabolism and immunity of the pearl oyster Pinctada margaritifera. Environmental Pollution, 266(Part 3), 115180 (9p.). Publisher's official version : , Open Access version :
Merou Nicolas, Lecadet Cyrielle, Pouvreau Stephane, Arzul Isabelle (2020). An eDNA/eRNA‐based approach to investigate the life cycle of non‐cultivable shellfish micro‐parasites: the case of Bonamia ostreae , a parasite of the European flat oyster Ostrea edulis. Microbial Biotechnology, 13(6), 1807-1818. Publisher's official version : , Open Access version :
Remize Marine, Planchon Frederic, Loh Ai Ning, Le Grand Fabienne, Bideau Antoine, Le Goic Nelly, Fleury Elodie, Miner Philippe, Corvaisier Rudolph, Volety Aswani, Soudant Philippe (2020). Study of Synthesis Pathways of the Essential Polyunsaturated Fatty Acid 20:5n-3 in the Diatom Chaetoceros Muelleri Using 13C-Isotope Labeling. Biomolecules, 10(5), 797 (27p.). Publisher's official version : , Open Access version :
Mazurais David, Servili Arianna, Noel Cyril, Cormier Alexandre, Collet Sophie, Leseur Romane, Le Roy Maelenn, Vitre Thomas, Madec Lauriane, Zambonino-Infante Jose-Luis (2020). Transgenerational regulation of cbln11 gene expression in the olfactory rosette of the European sea bass (Dicentrarchus labrax) exposed to ocean acidification. Marine Environmental Research, 159, 105022 (11p.).
Gaillard Sylvain, Le Goic Nelly, Malo Florent, Boulais Myrina, Fabioux Caroline, Zaccagnini Lucas, Carpentier Liliane, Sibat Manoella, Reveillon Damien, Sechet Veronique, Hess Philipp, Hegaret Helene (2020). Cultures of Dinophysis sacculus, D. acuminata and pectenotoxin 2 affect gametes and fertilization success of the Pacific oyster, Crassostrea gigas. Environmental Pollution, 265(Part B), 114840 (10p.).
Offret Clement, Paulino Sauvann, Gauthier Olivier, Château Kevin, Bidault Adeline, Corporeau Charlotte, Miner Philippe, Petton Bruno, Pernet Fabrice, Fabioux Caroline, Paillard Christine, Blay Gwenaelle Le (2020). The marine intertidal zone shapes oyster and clam digestive bacterial microbiota. Fems Microbiology Ecology, 96(8), fiaa078 (12p.).
Gardon Tony, Huvet Arnaud, Paul-Pont Ika, Cassone Anne-Laure, Koua Manaarii Sham, Soyez Claude, Jezequel Ronan, Receveur Justine, Le Moullac Gilles (2020). Toxic effects of leachates from plastic pearl-farming gear on embryo-larval development in the pearl oyster Pinctada margaritifera. Water Research, 179, 115890 (11p.). Publisher's official version : , Open Access version :
Dupont Samuel, Lokmer A., Corre E., Auguet Jean-Christophe, Petton Bruno, Toulza E., Montagnani Caroline, Tanguy G., Pecqueur D., Salmeron C., Guillou L., Desnues C., La Scola B., Bou Khalil J., De Lorgeril Julien, Mitta Guillaume, Gueguen Yannick, Escoubas Jean Michel (2020). Oyster hemolymph is a complex and dynamic ecosystem hosting bacteria, protists and viruses. Animal Microbiome, 2(1), 12 (16p.). Publisher's official version : , Open Access version :
Fleury Elodie, Barbier Pierrick, Petton Bruno, Normand Julien, Thomas Yoann, Pouvreau Stephane, Daigle Gaetan, Pernet Fabrice (2020). Latitudinal drivers of oyster mortality: deciphering host, pathogen and environmental risk factors. Scientific Reports, 10(1), 7264 (12p.). Publisher's official version : , Open Access version :
Guillier Laurent, Gourmelon Michele, Lozach Solen, Cadel-Six Sabrina, Vignaud Marie-Leone, Munck Nanna, Hald Tine, Palma Federica (2020). AB_SA: Accessory genes-Based Source Attribution – tracing the source of Salmonella enterica Typhimurium environmental strains. Microbial Genomics, 6(7), 10p. Publisher's official version : , Open Access version :
Pete Romain, Guyondet Thomas, Bec Beatrice, Derolez Valerie, Cesmat Ludovic, Lagarde Franck, Pouvreau Stephane, Fiandrino Annie, Richard Marion (2020). A box-model of carrying capacity of the Thau lagoon in the context of ecological status regulations and sustainable shellfish cultures. Ecological Modelling, 426, 109049 (17p.).
Clerissi Camille, De Lorgeril Julien, Petton Bruno, Lucasson Aude, Escoubas Jean Michel, Gueguen Yannick, Degremont Lionel, Mitta Guillaume, Toulza Eve (2020). Microbiota Composition and Evenness Predict Survival Rate of Oysters Confronted to Pacific Oyster Mortality Syndrome. Frontiers In Microbiology, 11(311), 11p. Publisher's official version : , Open Access version :
Avignon Solene, Auzoux-Bordenave Stephanie, Martin Sophie, Dubois Philippe, Badou Aicha, Coheleach Manon, Richard Nicolas, Di Giglio Sarah, Malet Loic, Servili Arianna, Gaillard Fanny, Huchette Sylvain, Roussel Sabine (2020). An integrated investigation of the effects of ocean acidification on adult abalone (Haliotis tuberculata). Ices Journal Of Marine Science, 77(2), 757-772.
Oyanedel Daniel, Labreuche Yannick, Bruto Maxime, Amraoui Hajar, Robino Etienne, Haffner Philippe, Rubio Tristan, Charriere Guillaume, Le Roux Frederique, Destoumieux-Garzón Delphine Vibrio splendidus O-antigen structure: A trade-off between virulence to oysters and resistance to grazers. Environmental Microbiology IN PRESS.
Lafont Maxime, Vergnes Agnes, Vidal-Dupiol Jeremie, De Lorgeril Julien, Gueguen Yannick, Haffner Philippe, Petton Bruno, Chaparro Cristian, Barrachina Celia, Destoumieux-Garzon Delphine, Mitta Guillaume, Gourbal Benjamin, Montagnani Caroline (2020). A Sustained Immune Response Supports Long-Term Antiviral Immune Priming in the Pacific Oyster, Crassostrea gigas. Mbio, 11(2), e02777-19 (17p.). Publisher's official version : , Open Access version :
Dambrine Chloe, Huret Martin, Woillez Mathieu, Pecquerie Laure, Allal Francois, Servili Arianna, De Pontual Helene (2020). Contribution of a bioenergetics model to investigate the growth and survival of European seabass in the Bay of Biscay – English Channel area. Ecological Modelling, 423, 109007 (11p.). Publisher's official version : , Open Access version :
Gonzalez-Fernandez Carmen, Le Grand Fabienne, Bideau Antoine, Huvet Arnaud, Paul-Pont Ika, Soudant Philippe (2020). Nanoplastics exposure modulate lipid and pigment compositions in diatoms. Environmental Pollution, 262, 114274 (10p.).
Foret M, Olivier F, Miner Philippe, Winkler G, Nadalini Jb, Tremblay R (2020). Influence of the physiological condition of bivalve recruits on their post-settlement dispersal potential. Marine Ecology Progress Series, 636, 77-89.
Castrec Justine, Hegaret Helene, Huber Matthias, Le Grand Jacqueline, Huvet Arnaud, Tallec Kevin, Boulais Myrina, Soudant Philippe, Fabioux Caroline (2020). The toxic dinoflagellate Alexandrium minutum impairs the performance of oyster embryos and larvae. Harmful Algae, 92, 101744 (9p.).
Servili Arianna, Canario Adelino V.M., Mouchel Olivier, Muñoz-Cueto Jose Antonio (2020). Climate change impacts on fish reproduction are mediated at multiple levels of the brain-pituitary-gonad axis. General And Comparative Endocrinology, 291, 113439 (15p.).
Cominassi Louise, Moyano Marta, Claireaux Guy, Howald Sarah, Mark Felix C., Zambonino-Infante Jose-Luis (2020). Food availability modulates the combined effects of ocean acidification and warming on fish growth. Scientific Reports, 10(1), 2338 (12p.). Publisher's official version : , Open Access version :
Petton Sebastien, Pouvreau Stephane, Dumas Franck (2020). Intensive use of Lagrangian trajectories to quantify coastal area dispersion. Ocean Dynamics, 70(4), 541-559.
Mazurais David, Servili Arianna, Le Bayon Nicolas, Gislard Sebastien, Madec Lauriane, Zambonino-Infante Jose-Luis (2020). Long-term exposure to near-future ocean acidification does not affect the expression of neurogenesis- and synaptic transmission-related genes in the olfactory bulb of European sea bass (Dicentrarchus labrax). Journal Of Comparative Physiology B-biochemical Systems And Environmental Physiology, 190(2), 161-167.
Puspita Maya, Setyawidati Nur Azmi Ratna, Stiger-Pouvreau Valerie, Vandanjon Laurent, Widowati Ita, Karma Radjasa Ocky, Bedoux Guy, Bourgougnon Nathalie (2020). Indonesian Sargassum species bioprospecting: potential applications of bioactive compounds and challenge for sustainable development. Advances in Botanical Research, 95(Chap.5), 113-161.
Aldred Nick, Chan Bin San, Emami Kaveh, Okano Keiju, Clare Anthony S., Mount Andrew S. (2020). Chitin is a functional component of the larval adhesive of barnacles. Communications Biology, 3(1), 31 (8p.). Publisher's official version : , Open Access version :
De Lorgeril Julien, Petton Bruno, Lucasson Aude, Perez Valerie, Stenger Pierre-Louis, Degremont Lionel, Montagnani Caroline, Escoubas Jean Michel, Haffner Philippe, Allienne Jean-Francois, Leroy Marc, Lagarde Franck, Vidal Dupiol Jeremie, Gueguen Yannick, Mitta Guillaume (2020). Differential basal expression of immune genes confers Crassostrea gigas resistance to Pacific Oyster Mortality Syndrome. Bmc Genomics, 21(1), 63 (14p.). Publisher's official version : , Open Access version :
Taormina Bastien, Di Poi Carole, Agnalt Ann-Lisbeth, Carlier Antoine, Desroy Nicolas, Escobar-Lux Rosa Helena, D’eu Jean-Francois, Freytet Florian, Durif Caroline M.F. (2020). Impact of magnetic fields generated by AC/DC submarine power cables on the behavior of juvenile European lobster (Homarus gammarus). Aquatic Toxicology, 220, 105401.
Lalegerie Fanny, Gager Leslie, Stiger-Pouvreau Valerie, Connan Solene (2020). The stressful life of red and brown seaweeds on the temperate intertidal zone: effect of abiotic and biotic parameters on the physiology of macroalgae and content variability of particular metabolites. Advances in Botanical Research, 95(Chap.8), 247-287.

Communication avec actes

Lagarde Franck, Richard Marion, Derolez Valerie, Bec Beatrice, Pete Romain, Hori Juri, Bayne Christopher, Correia-Martins Alana, Tremblay Rejean, Hamaguchi Masami, Shoji Jun, Makino Mitsutaku, Sato Masaaki, Nakaoka Masahiro, Miyajima Toshihiro, Pouvreau Stephane, Hori Masakazu (2020). Integrated Ecosystem Management for Exploited Coastal Ecosystem Dynamics Under Oligotrophication and Climate Changes. Ceccaldi HJ., Hénocque Y., Komatsu T., Prouzet P., Sautour B., Yoshida J. (eds) 2020. Evolution of Marine Coastal Ecosystems under the Pressure of Global Changes. Springer, Cham. Print ISBN 978-3-030-43483-0 Online ISBN 978-3-030-43484-7. Part. Vulnerability of Coastal Ecosystems and Risk Assessmentpp 253-268.


Fleury Elodie, Montagnani Caroline, Morga Benjamin, Richard Marion (2020). Compte-rendu des journées Mollusques Marins et Conchylicultures.
(2020) Microplastics2. Pollution aux microplastiques : détection, risques et remédiation à l'interface terre-mer. Rapport de synthèse.
Gardon Tony, Soyez Claude, Quillien Virgile, Cassone Anne-Laure, Reisser Celine, Le Luyer Jeremy, Beliaeff Benoit, Huvet Arnaud, Paul-Pont Ika, El Rakwe Maria, Boukerma Kada, Le Moullac Gilles (2020). Rapport intermédiaire 2019 de la Convention Microplastiques dans les Lagons. RBE/RMPf/2020.
Ifremer. ODE/VIGIES (2020). Journées REPHY 2020. Nantes, 5 et 6 février 2020. Compilation des interventions et résumés. ODE/VIGIES/20-04.

Expertises / Avis

Goulletquer Philippe, Boulben Sylviane, Boudry Pierre, Tessier Emmanuel, Stavrakakis Christophe (2020). Avis de l'Ifremer sur le projet de serres de production de crevettes et d’algues par l’EARL CREACH ANTON. DDTM 29 - Direction Départementale des Territoires et de la Mer du Finistère, Service Eau et Biodiversité, Unité Nature et Forêt, Quimper, Ref. Ifremer-D/CB_ Avis n° 20-017 du 24/03/2020, 12p., 1p.


Poppeschi Coline, Charria Guillaume, Unterberger Maximilian, Rimmelin-Maury Peggy, Goberville Eric, Barrier Nicolas, Petton Sebastien, Grossteffan Emilie, Repecaud Michel, Quemener Loic, Theetten Sebastien, Le Roux Jean-Francois, Treguer Paul (2020). Extreme coastal events linked with climate variation. Understanding low salinity episodes in the Bay of Brest, north-eastern Atlantic. EGU 2020 General Assembly. 4–8 May 2020, Online.