Caillon Coline, Fleury Elodie, Caput Edgar, Chauvel Lucie, Corporeau Charlotte, Diagne Moussa, Di Poi Broussard Carole, Dubreuil Christine, Foucault Elodie, Gromberg Theo, Huber Matthias, Koechlin Hugo, Le Grand Jacqueline, Le Roy Valerian, Queau Isabelle, Quere Claudie, Quillien Virgile, Pernet Fabrice (2024). Physiological data from Pacific oysters exposed to different temperature and pH conditions, tidal treatments and food levels, followed by an OsHV-1 challenge . SEANOE . https://doi.org/10.17882/102048

Le Luyer Jeremy, Ky Chin-Long, Destanque Thibault, Quillien Virgile, Sham Koua Manaarii, Auffret Pauline (2024). Screening genome-wide gene expression profiles in multistage larva in the pearl oyster Pinctada margaritifera. IFREMER. https://doi.org/10.12770/85d63291-71f6-4d36-bfbb-1e0c2a864b7e

Bernardini Ilaria, Tallec Kevin, Paul-Pont Ika, Peruzza Luca, Dalla Rovere Giulia, Huber Matthias, Di Poi Broussard Carole, Koechlin Hugo, Quere Claudie, Quillien Virgile, Le Grand Jacqueline, Le Goic Nelly, Lambert Christophe, Lagarde Fabienne, Détrée Camille, Trevisan Rafael, Corporeau Charlotte, Patarnello Tomaso, Milan Massimo, Huvet Arnaud (2024). Effects of tire particles and associated-chemicals on the Pacific oyster (Magallana gigas) physiology, reproduction and next-generation . Journal Of Hazardous Materials , 480, 135742 (12p.) . Publisher's official version : https://doi.org/10.1016/j.jhazmat.2024.135742 , Open Access version : https://archimer.ifremer.fr/doc/00907/101895/

Dorant Yann, Quillien Virgile, Le Luyer Jeremy, Ky Chin-Long (2024). Comparative transcriptomics identifies genes underlying growth performance of the Pacific black-lipped pearl oyster Pinctada margaritifera . Bmc Genomics , 25(1), 717 (16p.) . Publisher's official version : https://doi.org/10.1186/s12864-024-10636-0 , Open Access version : https://archimer.ifremer.fr/doc/00901/101312/

Destanque Thibault, Le Luyer Jeremy, Quillien Virgile, Sham Koua Manaarii, Auffret Pauline, Ky Chin-Long (2024). Substantial gene expression shifts during larval transitions in the pearl oyster Pinctada margaritifera . Journal Of Experimental Zoology Part B-molecular And Developmental Evolution , 342(2), 76-84 . Publisher's official version : https://doi.org/10.1002/jez.b.23243 , Open Access version : https://archimer.ifremer.fr/doc/00876/98828/

Gardon Tony, El Rakwe Maria, Paul-Pont Ika, Le Luyer Jeremy, Thomas Lena, Prado Enora, Boukerma Kada, Cassone Anne-Laure, Quillien Virgile, Soyez Claude, Costes Louis, Crusot Margaux, Dreanno Catherine, Le Moullac Gilles, Huvet Arnaud (2021). Microplastics contamination in pearl-farming lagoons of French Polynesia . Journal Of Hazardous Materials , 419, 126396 (13p.) . Publisher's official version : https://doi.org/10.1016/j.jhazmat.2021.126396 , Open Access version : https://archimer.ifremer.fr/doc/00703/81508/

Gardon Tony, Morvan Lucie, Huvet Arnaud, Quillien Virgile, Soyez Claude, Le Moullac Gilles, Le Luyer Jeremy (2020). Microplastics induce dose-specific transcriptomic disruptions in energy metabolism and immunity of the pearl oyster Pinctada margaritifera . Environmental Pollution , 266(Part 3), 115180 (9p.) . Publisher's official version : https://doi.org/10.1016/j.envpol.2020.115180 , Open Access version : https://archimer.ifremer.fr/doc/00640/75213/

Auffret Pauline, Le Luyer Jeremy, Sham Koua Manaarii, Quillien Virgile, Ky Chin-Long (2020). Tracing key genes associated with the Pinctada margaritifera albino phenotype from juvenile to cultured pearl harvest stages using multiple whole transcriptome sequencing . Bmc Genomics , 21(1), 662 (13p.) . Publisher's official version : https://doi.org/10.1186/s12864-020-07015-w , Open Access version : https://archimer.ifremer.fr/doc/00652/76420/

(2020) Microplastics2. Pollution aux microplastiques : détection, risques et remédiation à l'interface terre-mer . Rapport de synthèse . https://archimer.ifremer.fr/doc/00644/75659/

Gardon Tony, Soyez Claude, Quillien Virgile, Cassone Anne-Laure, Reisser Celine, Le Luyer Jeremy, Beliaeff Benoit, Huvet Arnaud, Paul-Pont Ika, El Rakwe Maria, Boukerma Kada, Le Moullac Gilles (2020). Rapport intermédiaire 2019 de la Convention Microplastiques dans les Lagons. RBE/RMPf/2020 .

Le Luyer Jeremy, Auffret Pauline, Quillien Virgile, Leclerc Nicolas, Reisser Celine, Vidal-Dupiol Jeremie, Ky Chin-Long (2019). Whole transcriptome sequencing and biomineralization gene architecture associated with cultured pearl quality traits in the pearl oyster, Pinctada margaritifera . Bmc Genomics , 20, - . Publisher's official version : https://doi.org/10.1186/s12864-019-5443-5 , Open Access version : https://archimer.ifremer.fr/doc/00475/58695/

Pauletto Marianna, Di Camillo Barbara, Miner Philippe, Huvet Arnaud, Quillien Virgile, Milan Massimo, Ferraresso Serena, Pegolo Sara, Patarnello Tomaso, Bargelloni Luca (2018). Understanding the mechanisms involved in the high sensitivity of Pecten maximus larvae to aeration . Aquaculture , 497, 189-199 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2018.07.059 , Open Access version : https://archimer.ifremer.fr/doc/00453/56420/

Gardon Tony, Soyez Claude, Quillien Virgile, Cassone Anne-Laure, Reisser Celine, Le Luyer Jeremy, Beliaeff Benoit, Huvet Arnaud, Paul-Pont Ika, Le Moullac Gilles (2018). Rapport intermédiaire de la Convention Microplastiques dans les Lagons . RBE/RMPF/2018 .

Castrec Justine, Soudant P., Payton L., Tran D., Miner Philippe, Lambert C., Le Goic N., Huvet Arnaud, Quillien Virgile, Boullot F., Amzil Zouher, Hegaret Helene, Fabioux C. (2018). Bioactive extracellular compounds produced by the dinoflagellate Alexandrium minutum are highly detrimental for oysters . Aquatic Toxicology , 199, 188-198 . Publisher's official version : https://doi.org/10.1016/j.aquatox.2018.03.034 , Open Access version : https://archimer.ifremer.fr/doc/00435/54637/

Gardon Tony, Reisser Celine, Soyez Claude, Quillien Virgile, Le Moullac Gilles (2018). Microplastics Affect Energy Balance and Gametogenesis in the Pearl Oyster Pinctada margaritifera . Environmental Science & Technology , 52(9), 5277-5286 . Publisher's official version : https://doi.org/10.1021/acs.est.8b00168 , Open Access version : https://archimer.ifremer.fr/doc/00435/54684/

Ky Chin-Long, Broustal Floriane, Koua Manaarii Sham, Quillien Virgile, Beliaeff Benoit (2018). Donor effect on cultured pearl nacre development and shell matrix gene expression in Pinctada margaritifera reared in different field sites . Aquaculture Research , 49(5), 1934-1943 . Publisher's official version : https://doi.org/10.1111/are.13649 , Open Access version : https://archimer.ifremer.fr/doc/00425/53699/

Ky Chin-Long, Quillien Virgile, Broustal Floriane, Soyez Claude, Devaux Dominique (2018). Phenome of pearl quality traits in the mollusc transplant model Pinctada margaritifera . Scientific Reports , 8, 2122 (1-11) . Publisher's official version : https://doi.org/10.1038/s41598-018-20564-1 , Open Access version : https://archimer.ifremer.fr/doc/00423/53419/

Le Moullac Gilles, Gardon Tony, Soyez Claude, Quillien Virgile, Reisser Celine, Le Luyer Jeremy, Beliaeff Benoit, Huvet Arnaud, Paul-Pont Ika (2017). Microplastiques dans les Lagons. Rapport initial de la convention MICROLAG . RBE/RMPF/2017 .

Pauletto Marianna, Segarra Amelie, Montagnani Caroline, Quillien Virgile, Faury Nicole, Le Grand Jacqueline, Miner Philippe, Petton Bruno, Labreuche Yannick, Fleury Elodie, Fabioux Caroline, Bargelloni Luca, Renault Tristan, Huvet Arnaud (2017). Long dsRNAs promote an anti-viral response in Pacific oyster hampering ostreid herpesvirus 1 replication . Journal Of Experimental Biology , 220(20), 3671-3685 . Publisher's official version : https://doi.org/10.1242/jeb.156299 , Open Access version : https://archimer.ifremer.fr/doc/00409/52011/

Fleury Elodie (2016). ECOSCOPA. Evaluer la qualité des écosystèmes conchylicoles en lien avec les pressions climatiques et anthropiques. Rapport annuel campagne 2015 . Convention DPMA ‐ IFREMER 14/1211577/F . https://archimer.ifremer.fr/doc/00334/44511/

Fleury Elodie, Dechamps Lucie, Bellec Gwenael, Quillien Virgile, Huvet Arnaud, Cochennec-Laureau Nathalie, Pouvreau Stephane, Boudry Pierre, Normand Julien (2016). ECOSCOPA : Vers l’identification de marqueurs physiologiques pour qualifier l’écosystème . Journées Observations Conchylicoles - Nantes - Février 2016 .

Sussarellu Rossana, Suquet Marc, Thomas Yoann, Lambert Christophe, Fabioux Caroline, Pernet Marie Eve Julie, Le Goic Nelly, Quillien Virgile, Mingant Christian, Epelboin Yanouk, Corporeau Charlotte, Guyomarch Julien, Robbens Johan, Paul-Pont Ika, Soudant Philippe, Huvet Arnaud (2016). Oyster reproduction is affected by exposure to polystyrene microplastics . Proceedings Of The National Academy Of Sciences Of The United States Of America , 113(9), 2430-2435 . Publisher's official version : https://doi.org/10.1073/pnas.1519019113 , Open Access version : https://archimer.ifremer.fr/doc/00311/42233/

Fuhrmann Marine, Petton Bruno, Quillien Virgile, Faury Nicole, Morga Benjamin, Pernet Fabrice (2016). Salinity influences disease-induced mortality of the oyster Crassostrea gigas and infectivity of the ostreid herpesvirus 1 (OsHV-1) . Aquaculture Environment Interactions , 8, 543-552 . Publisher's official version : https://doi.org/10.3354/aei00197 , Open Access version : https://archimer.ifremer.fr/doc/00350/46100/

de Sousa Joana Teixeira, Milan Massimo, Pauletto Marianna, Bargelloni Luca, Joaquim Sandra, Matias Domitilia, Matias Ana Margarete, Quillien Virgile, Leitao Alexandra, Huvet Arnaud (2015). A microarray-based analysis of oocyte quality in the European clam Ruditapes decussatus . Aquaculture , 446, 17-24 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2015.04.018 , Open Access version : https://archimer.ifremer.fr/doc/00260/37147/

Fleury Elodie, Normand Julien, Suquet Eloïse, Dechamps Lucie, Quillien Virgile, Richard Marion, Cochennec-Laureau Nathalie (2015). In situ markers of Crassostrea gigas oyster sensibility to pathogen infection : toward the selection of early indicators of summer mortality . Aquaculture 2015 - Cutting Edge Science in Aquaculture. 23-26 August 2015, Montpellier . https://archimer.ifremer.fr/doc/00286/39768/

Huvet Arnaud, Beguel Jean-Philippe, Pereira Cavaleiro Nathalia, Thomas Yoann, Quillien Virgile, Boudry Pierre, Alunno-Bruscia Marianne, Fabioux Caroline (2015). Disruption of amylase genes by RNA interference affects reproduction in the Pacific oyster Crassostrea gigas . Journal Of Experimental Biology , 218(11), 1740-1747 . Publisher's official version : https://doi.org/10.1242/jeb.116699 , Open Access version : https://archimer.ifremer.fr/doc/00271/38239/

Boulais Myrina, Corporeau Charlotte, Huvet Arnaud, Bernard Ismael, Quere Claudie, Quillien Virgile, Fabioux Caroline, Suquet Marc (2015). Assessment of oocyte and trochophore quality in Pacific oyster, Crassostrea gigas . Aquaculture , 437, 201-207 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2014.11.025 , Open Access version : https://archimer.ifremer.fr/doc/00239/35010/

Normand Julien, Li Ronghua, Quillien Virgile, Nicolas Jean-Louis, Boudry Pierre, Pernet Fabrice, Huvet Arnaud (2014). Contrasted survival under field or controlled conditions displays associations between mRNA levels of candidate genes and response to OsHV-1 infection in the Pacific oyster Crassostrea gigas . Marine Genomics , 15, 95-102 . Publisher's official version : https://doi.org/10.1016/j.margen.2014.02.002 , Open Access version : https://archimer.ifremer.fr/doc/00177/28823/

Sousa Joana, Milan Massimo, Bargelloni Luca, Pauletto Marianna, Matias Domitilia, Joaquim Sandra, Matias Ana Margarete, Quillien Virgile, Leitao Alexandra, Huvet Arnaud (2014). A Microarray-Based Analysis of Gametogenesis in Two Portuguese Populations of the European Clam Ruditapes decussatus . Plos One , 9(3), e92202 . Publisher's official version : https://doi.org/10.1371/journal.pone.0092202 , Open Access version : https://archimer.ifremer.fr/doc/00188/29935/

Guevelou Eric, Huvet Arnaud, Galindo-Sanchez Clara E., Milan Massimo, Quillien Virgile, Daniel Jean-Yves, Quere Claudie, Boudry Pierre, Corporeau Charlotte (2013). Sex-Specific Regulation of AMP-Activated Protein Kinase (AMPK) in the Pacific Oyster Crassostrea gigas . Biology Of Reproduction , 89(4), 1-15 . Publisher's official version : https://doi.org/10.1095/biolreprod.113.109728 , Open Access version : https://archimer.ifremer.fr/doc/00168/27911/

Guevelou Eric, Huvet Arnaud, Sussarellu Rossana, Milan Massimo, Guo Ximing, Li Li, Zhang Guofan, Quillien Virgile, Daniel Jean-Yves, Quere Claudie, Boudry Pierre, Corporeau Charlotte (2013). Regulation of a truncated isoform of AMP-activated protein kinase alpha (AMPKalpha) in response to hypoxia in the muscle of Pacific oyster Crassostrea gigas . Journal Of Comparative Physiology B-biochemical Systemic And Environmental Physiology , 183(5), 597-611 . Publisher's official version : https://doi.org/10.1007/s00360-013-0743-6 , Open Access version : https://archimer.ifremer.fr/doc/00119/22998/

Gonzales Ricardo, Quillien Virgile, Robert Rene (2013). The effects of eight single microalgal diets on sex-ratio and gonad development throughout European flat oyster (Ostrea edulis L.) conditioning . Aquaculture , 400, 1-5 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2013.02.036 , Open Access version : https://archimer.ifremer.fr/doc/00144/25497/

Sussarellu Rossana, Soudant Philippe, Fabioux Caroline, Hegaret Helene, Le Goic Nelly, Lambert Christophe, Long Marc, Daniel Jean-Yves, Quillien Virgile, Quere Claudie, Epelboin Yanouk, Mingant Christian, Petton Bruno, Baud Dominique, Queau Isabelle, Le Souchu Pierrick, Miner Philippe, Huelvan Christine, Le Delliou Herve, Le Gall Marie-Madeleine, Severe Armelle, Mazurais David, Zambonino-Infante Jose Luis, Pouvreau Stephane, Robert Rene, Corporeau Charlotte, Boudry Pierre, Huvet Arnaud (2013). Les microplastiques : sont-ils une menace pour la zone des 2 Mers ? Projet Interreg MICRO . Journées conchylicoles Ifremer 2013, 23-25 janvier, Roscoff .

Beguel Jean-Philippe, Huvet Arnaud, Quillien Virgile, Lambert Christophe, Fabioux Caroline (2013). Study of the antioxidant capacity in gills of the Pacific oyster Crassostrea gigas in link with its reproductive investment . Comparative Biochemistry And Physiology C-toxicology & Pharmacology , 157(1), 63-71 . Publisher's official version : https://doi.org/10.1016/j.cbpc.2012.10.004 , Open Access version : https://archimer.ifremer.fr/doc/00116/22744/

Gonzalez-Araya Ricardo, Mingant Christian, Quillien Virgile, Queau Isabelle, Lebrun Luc, Robert Rene (2012). The effect of eight single microalgal diets on sex-ratio and gonad development throughout European flat oyster (Ostrea edulis L.) conditioning. Aqua 2012 "Global Aquaculture - Securing our Future", 02-05 September 2012, Prague, Czech Republic .

Flahauw Emilie, Davenel Armel, Quellec Stéphane, Quillien Virgile, Degremont Lionel, Lapegue Sylvie, Hatt Philippe-Jacques (2012). Evaluation of the gonad volume throughout magnetic resonance imaging in Crassostrea gigas and comparison with the histological method . PHYSIOMAR 2012, 4-9 Septembre 2012, International Meeting, Santiago de Compostela, Spain . https://archimer.ifremer.fr/doc/00107/21784/

Huvet Arnaud, Fleury Elodie, Corporeau Charlotte, Quillien Virgile, Daniel Jean-Yves, Riviere Guillaume, Boudry Pierre, Fabioux Caroline (2012). In Vivo RNA Interference of a Gonad-Specific Transforming Growth Factor-beta in the Pacific Oyster Crassostrea gigas . Marine Biotechnology , 14(4), 402-410 . Publisher's official version : https://doi.org/10.1007/s10126-011-9421-4 , Open Access version : https://archimer.ifremer.fr/doc/00087/19794/

Fleury Elodie, Normand Julien, Fabioux Caroline, Daniel Jean-Yves, Quillien Virgile, Degremont Lionel, Nicolas Jean-Louis, Boudry Pierre, Pernet Fabrice, Huvet Arnaud (2011). Identification de gènes associés à la survie estivale de l’huître Crassostrea gigas: perspectives pour la compréhension des mécanismes de résistance . Journées d'échange et d'information « Surmortalité des huîtres creuses », 29 et 30 novembre 2011, Nantes .

Huvet Arnaud, Normand Julien, Fleury Elodie, Quillien Virgile, Fabioux Caroline, Boudry Pierre (2010). Reproductive effort of Pacific oysters: A trait associated with susceptibility to summer mortality . Aquaculture , 304(1-4), 95-99 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2010.03.022 , Open Access version : https://archimer.ifremer.fr/doc/00006/11766/

Pernet Fabrice, Barret Jean, Le Gall Patrik, Malet Nathalie, Pastoureaud Annie, Munaron Dominique, de Lorgeril Julien, Bachere Evelyne, Vaquer Andre, Huvet Arnaud, Corporeau Charlotte, Normand Julien, Boudry Pierre, Moal Jeanne, Quere Claudie, Quilien Virgile, Daniel Jean-Yves, Pepin Jean-Francois, Saulnier Denis, Gonzalez Jean-Louis (2010). Mortalité du naissain d’Huître creuse Crassostrea gigas dans l’étang de Thau en 2009 . RST.DOP/LER/LR 10-008 . https://archimer.ifremer.fr/doc/00002/11354/

Fabioux Caroline, Corporeau Charlotte, Quillien Virgile, Fleury Elodie, Favrel Pascal, Huvet Arnaud (2009). In vivo RNA interference in oyster: vasa silencing inhibits germ cell development . Genomics in Aquaculture International symposium, July 2009, Bodø University College .

Fabioux Caroline, Corporeau Charlotte, Quillien Virgile, Favrel Pascal, Huvet Arnaud (2009). In vivo RNA interference in oyster -vasa silencing inhibits germ cell development . FEBS Journal , 276(9), 2566-2573 . Publisher's official version : https://doi.org/10.1111/j.1742-4658.2009.06982.x , Open Access version : https://archimer.ifremer.fr/doc/00000/6641/

Huvet Arnaud, Jeffroy F, Fabioux C, Daniel Jean-Yves, Quillien Virgile, Van Wormhoudt A, Moal Jeanne, Samain Jean-Francois, Boudry Pierre, Pouvreau Stephane (2008). Association among growth, food consumption-related traits and amylase gene polymorphism in the Pacific oyster Crassostrea gigas . Animal Genetics , 39(6), 662-665 . Publisher's official version : https://doi.org/10.1111/j.1365-2052.2008.01776.x , Open Access version : https://archimer.ifremer.fr/doc/00000/5165/

Fabioux Caroline, Fleury Elodie, Normand Julien, Quillien Virgile, Boudry Pierre, Huvet Arnaud (2008). The partial sterility of triploid oysters. Cellular and molecular investigation . Physiomar 08 - Physilogical aspects of reproduction, nutrition and growth "Marine molluscs in a changing environment". 01 au 04 septembre 2008, Brest .