Le Luyer Jeremy, Ky Chin-Long, Destanque Thibault, Quillien Virgile, Sham Koua Manaarii, Auffret Pauline (2024). Screening genome-wide gene expression profiles in multistage larva in the pearl oyster Pinctada margaritifera. IFREMER. https://doi.org/10.12770/85d63291-71f6-4d36-bfbb-1e0c2a864b7e

Destanque Thibault, Le Luyer Jeremy, Quillien Virgile, Sham Koua Manaarii, Auffret Pauline, Ky Chin-Long (2024). Substantial gene expression shifts during larval transitions in the pearl oyster Pinctada margaritifera . Journal of Experimental Zoology Part B: Molecular and Developmental Evolution , 342(2), 76-84 . Publisher's official version : https://doi.org/10.1002/jez.b.23243 , Open Access version : https://archimer.ifremer.fr/doc/00876/98828/

Auffret Pauline, de Massy Bernard, Clément Julie A. J. (2024). Mapping Meiotic DNA Breaks: Two Fully-Automated Pipelines to Analyze Single-Strand DNA Sequencing Data, hotSSDS and hotSSDS-extra . In Barchi, M., De Felici, M. (eds) 2024. Germ Cell Development. Methods and Protocols. Part of the book series: Methods in Molecular Biology (MIMB, volume 2770). DOI 10.1007/978-1-0716-3698-5_16, ISBN 978-1-0716-3697-8, pp.227-261 (Springer US) .

Auffret Pauline, Servili Arianna, Gonzalez Anne-Alicia, Fleury Marie-Lou, Mark Felix Christopher, Mazurais David (2023). Transgenerational exposure to ocean acidification impacts the hepatic transcriptome of European sea bass (Dicentrarchus labrax) . Bmc Genomics , 24(1), 331 (11p.) . Publisher's official version : https://doi.org/10.1186/s12864-023-09353-x , Open Access version : https://archimer.ifremer.fr/doc/00842/95388/

Zainu Akbar, Dupaigne Pauline, Bouchouika Soumya, Cau Julien, Clement Julie A. J., Auffret Pauline, Ropars Virginie, Charbonnier Jean-Baptiste, de Massy Bernard, Kumar Rajeev, Baudat Frédéric The FIGNL1-FIRRM complex is required to complete meiotic recombination in the mouse and prevents massive DNA damage-independent RAD51 and DMC1 loading . bioRxiv IN PRESS . Publisher's official version : https://doi.org/10.1101/2023.05.17.541096 , Open Access version : https://archimer.ifremer.fr/doc/00847/95918/