Jeux de données
2024
Callac Nolwenn, Boulo Viviane, Ansquer Dominique, Belliard Corine, Plougoulen Gwen, Wabete Nelly, Pham Dominique, Saulnier Denis, Le Luyer Jeremy, Loyat Alain, Lafille Marc André, Basset Caline, Lam Jean-Sebastien, Mailliez Jean-René, Lau Christophe, Elissondo Carine, Delecheneau Jean-Michel, Brun Pierre, Matehau Ariora, Taupua, Ballan Valentine, Le Rhollec Julien (2024). Active microbiome data of Penaeus stylirostris hemolymph and its rearing water under contrasting conditions. IFREMER. https://sextant.ifremer.fr/record/edd1b589-b654-46e6-ba6a-493eb2b9ec82/
2023
Meyneng Mathisse, Lemonnier Hugues, Le Gendre Romain, Plougoulen Gwenola, Antypas Florence, Ansquer Dominique, Serghine Joelle, Siano Raffaele (2023). SEARSE project: metabarcoding data (V4-18S, V4V5-16S). IFREMER. https://doi.org//10.12770/26840434-8354-4856-9d5e-e562c8de7252
2022
Siano Raffaele, Meyneng Mathisse, Ansquer Dominique, Antypas Florence, Haize Thomas, Mouras Naïna, Lemonnier Hugues (2022). ECOMINE, Influence of mining massifs on the evolution of coastal microbial communities: eDNA as a tool for detecting environmental changes. IFREMER. https://doi.org/10.12770/62cde5b9-1888-4b2c-b8a5-a490a696b078
Bibliographie
2024
Callac Nolwenn, Giraud Carolane, Pham Dominique, Ansquer Dominique, Wabete Nelly, Boulo Viviane (2024). Active Microbiota of Penaeus stylirostris Larvae: Partially Shaped via Vertical and Horizontal Transmissions and Larval Ontogeny . Microorganisms , 12(3), 608 (21p.) . Publisher's official version : https://doi.org/10.3390/microorganisms12030608 , Open Access version : https://archimer.ifremer.fr/doc/00882/99439/
Meyneng Mathisse, Lemonnier Hugues, Le Gendre Romain, Antypas Florence, Ansquer Dominique, Serghine Joelle, Schmitt Sophie, Siano Raffaele (2024). Subtropical coastal microbiome variations due to massive river runoff after a cyclonic event . Environmental Microbiome , 19(1), 10 (24p.) . Publisher's official version : https://doi.org/10.1186/s40793-024-00554-9 , Open Access version : https://archimer.ifremer.fr/doc/00875/98690/
2023
Colette Marie, Guentas Linda, Della Patrona Luc, Ansquer Dominique, Callac Nolwenn (2023). Suaeda australis and its associated rhizosphere microbiota: a comparison of the nutrient removal potential between different shrimp farm sediments in New Caledonia . Frontiers In Microbiology , 14, 1260585 (16p.) . Publisher's official version : https://doi.org/10.3389/fmicb.2023.1260585 , Open Access version : https://archimer.ifremer.fr/doc/00856/96782/
Colette Marie, Guentas Linda, Della Patrona Luc, Ansquer Dominique, Callac Nolwenn (2023). Dynamic of active microbial diversity in rhizosphere sediments of halophytes used for bioremediation of earthen shrimp ponds . Environmental Microbiome , 18(1), 58 (20p.) . Publisher's official version : https://doi.org/10.1186/s40793-023-00512-x , Open Access version : https://archimer.ifremer.fr/doc/00846/95800/
Meyneng Mathisse, Lemonnier Hugues, Le Gendre Romain, Plougoulen Gwenola, Antypas Florence, Ansquer Dominique, Siano Raffaele (2023). Subtropical coastal microbiome changes due to massive river run-off after a cyclonic event . ASLO - Aquatic Sciences Meeting 2023 "Resilience and Recovery in Aquatic Systems". 4–9 June 2023, Palma de Mallorca, Spain .
Lemonnier Hugues, Siano Raffaele, Dupouy Cécile, Mounier Stéphane, Juillot Farid, Le Gendre Romain, Antypas Florence, Lopez Etienne, Meyneng Mathisse, Plougoulen Gwenola, Jamet Léocadie, Ansquer Dominique (2023). Projet « SEARSÉ ». Programme « Au fil de l’eau ». Rapport final . IFREMER/LEAD/programme au Fil de l’EAU du CRESICA, 83 pages avec annexes . https://archimer.ifremer.fr/doc/00839/95144/
2022
Callac Nolwenn, Boulo Viviane, Giraud Carolane, Beauvais Maxime, Ansquer Dominique, Ballan Valentine, Mailliez Jean-Rene, Wabete Nelly, Pham Dominique (2022). Microbiota of the Rearing Water of Penaeus stylirostris Larvae Influenced by Lagoon Seawater and Specific Key Microbial Lineages of Larval Stage and Survival . Microbiology Spectrum , 10(6), e04241-22 (19p.) . Publisher's official version : https://doi.org/10.1128/spectrum.04241-22 , Open Access version : https://archimer.ifremer.fr/doc/00807/91912/
2021
Giraud Carolane, Callac Nolwenn, Beauvais Maxime, Mailliez Jean-Rene, Ansquer Dominique, Selmaoui-Folcher Nazha, Pham Dominique, Wabete Nelly, Boulo Viviane (2021). Potential lineage transmission within the active microbiota of the eggs and the nauplii of the shrimp Litopenaeus stylirostris : possible influence of the rearing water and more . Peerj , 9, e12241 (24p.) . Publisher's official version : https://doi.org/10.7717/peerj.12241 , Open Access version : https://archimer.ifremer.fr/doc/00735/84654/
2018
Sorieul Louis, Wabete Nelly, Ansquer Dominique, Mailliez Jean-Rene, Pallud Marie, Zhang Cong, Lindivat Mathilde, Boulo Viviane, Pham Dominique (2018). Survival improvement conferred by the Pseudoalteromonas sp. NC201 probiotic in Litopenaeus stylirostris exposed to Vibrio nigripulchritudo infection and salinity stress . Aquaculture , 495, 888-898 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2018.06.058 , Open Access version : https://archimer.ifremer.fr/doc/00445/55653/
2017
Labreuche Yannick, Chenivesse Sabine, Jeudy Alexandra, Le Panse Sophie, Boulo Viviane, Ansquer Dominique, Pages Sylvie, Givaudan Alain, Czjzek Mirjam, Le Roux Frederique (2017). Nigritoxin is a bacterial toxin for crustaceans and insects . Nature Communications , 8(1), 1248 (1-9) . Publisher's official version : https://doi.org/10.1038/s41467-017-01445-z , Open Access version : https://archimer.ifremer.fr/doc/00408/51934/
2016
Pham Dominique, Charmantier Guy, Boulo Viviane, Wabete Nelly, Ansquer Dominique, Dauga Clement, Grousset Evelyse, Labreuche Yannick, Charmantier-Daures Mireille (2016). Ontogeny of osmoregulation in the Pacific blue shrimp, Litopenaeus stylirostris (decapoda, penaeidae): Deciphering the role of the Na+/K+-ATPase . Comparative Biochemistry And Physiology B-biochemistry & Molecular Biology , 196, 27-37 . Publisher's official version : https://doi.org/10.1016/j.cbpb.2015.12.007 , Open Access version : https://archimer.ifremer.fr/doc/00311/42176/
2015
Ifremer Nouvelle-Calédonie (2015). Dossier d’évaluation. Bilan pour la période 2011-2015. Projet pour la période 2016-2020 .
2014
Pham Dominique, Ansquer Dominique, Chevalier Anne, Dauga Clement, Peyramale Aude, Wabete Nelly, Labreuche Yannick (2014). Selection and characterization of potential probiotic bacteria for Litopenaeus stylirostris shrimp hatcheries in New Caledonia . Aquaculture , 432, 475-482 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2014.04.031 , Open Access version : https://archimer.ifremer.fr/doc/00190/30129/
2013
Goudenege David, Labreuche Yannick, Krin Evelyne, Ansquer Dominique, Mangenot Sophie, Calteau Alexandra, Medigue Claudine, Mazel Didier, Polz Martin F., Le Roux Frederique (2013). Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo identifies virulence-associated traits . Isme Journal , 7(10), 1985-1996 . Publisher's official version : https://doi.org/10.1038/ismej.2013.90 , Open Access version : https://archimer.ifremer.fr/doc/00160/27117/
Mugnier Chantal, Justou Carole, Lemonnier Hugues, Patrois Jacques, Ansquer Dominique, Goarant Cyrille, Lecoz Jean-René (2013). Evaluación de los parámetros biológicos, fisiológicos, inmunológicos y nutricionales en camarones Litopenaeus stylirostris afectados por vibriosis . Aqua cultura, la voz oficial del sector , 96(4), 26-31 . Open Access version : https://archimer.ifremer.fr/doc/00354/46555/
Mugnier Chantal, Justou Carole, Lemonnier Hugues, Patrois Jacques, Ansquer Dominique, Goarant Cyrille, Le Coz Jean-Rene (2013). Biological, physiological, immunological and nutritional assessment of farm-reared Litopenaeus stylirostris shrimp affected or unaffected by vibriosis . Aquaculture , 388, 105-114 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2013.01.010 , Open Access version : https://archimer.ifremer.fr/doc/00176/28764/
2012
Beliaeff Benoit, Laugier Thierry, Chim Liet, Coatanea Denis, Della Patrona Luc, Goyard Emmanuel, Herlin Jose, Labreuche Yannick, Lemaire Pierrette, Lemonnier Hugues, Morvan Patrice, Patrois Jacques, Peignon Jean-Marie, Pham Dominique, Soulard Benoit, Wabete Nelly, Walling Emilie, Ansquer Dominique, Castex Mathieu, Lucas Ronan, Reynaud Yann (2012). Projet Déduction 2007-2010. Bilan par action et annexes . https://archimer.ifremer.fr/doc/00199/31006/
Labreuche Yannick, Pallandre Laurane, Ansquer Dominique, Herlin Jose, Wapotro Billy, Le Roux Frederique (2012). Pathotyping of Vibrio Isolates by Multiplex PCR Reveals a Risk of Virulent Strain Spreading in New Caledonian Shrimp Farms . Microbial Ecology , 63(1), 127-138 . Publisher's official version : https://doi.org/10.1007/s00248-011-9951-3 , Open Access version : https://archimer.ifremer.fr/doc/00063/17398/
2010
Walling Emilie, Vourey Elodie, Ansquer Dominique, Beliaeff Benoit, Goarant C. (2010). Vibrio nigripulchritudo monitoring and strain dynamics in shrimp pond sediments . Journal Of Applied Microbiology , 108(6), 2003-2011 . Publisher's official version : https://doi.org/10.1111/j.1365-2672.2009.04601.x , Open Access version : https://archimer.ifremer.fr/doc/00004/11484/
2009
Charme Marion, Ansquer Dominique, Vourey Elodie, Walling Emilie, Beliaeff Benoit, Labreuche Yannick (2009). Detection of shrimp pathogen Vibrio nigripulchritudo in sediments of a New-Caledonian grow-out pond during a drying period . PSIC 11 - 11th Pacific Science Inter-Congress : Pacific Countries and their Ocean: Facing Local and Global Changes / 2nd Symposium on French Research in the Pacific. March 2 - 6, 2009 Tahiti, French Polynesia. https://archimer.ifremer.fr/doc/00197/30874/
Beliaeff Benoit, Chim Liet, Della Patrona Luc, Goyard Emmanuel, Herlin Jose, Labreuche Yannick, Walling Emilie, Ansquer Dominique, Brun Pierre, Castex Mathieu, Coatanea Denis, Courties Claude, de Lorgeril Julien, Dufour Robert, Frappier Julie, Goarant Cyrille, Huber Matthias, Lemaire Pierrette, Lemonnier Hugues, Loubersac Lionel, Le Roux Frederique, Lucas Ronan, Patrois Jacques, Peignon Jean-Marie, Pham Dominique, Ramage Yannick, Soulard Benoit, Vic Marlene, Vourey Elodie, Wabete Nelly (2009). DEDUCTION : A research project for shrimp farming sustainability in New-Caledonia . The 11th Pacific Science Inter-Congress : Pacific Countries and their Ocean: Facing Local and Global Changes. March 2 - 6, 2009 Tahiti, French Polynesia . https://archimer.ifremer.fr/doc/00143/25438/
2008
Goyard Emmanuel, Goarant Cyrille, Ansquer Dominique, Brun Pierre, de Decker Sophie, Dufour Robert, Galinie C, Peignon Jean-Marie, Pham Dominique, Vourey Elodie, Harache Yves, Patrois Jacques (2008). Cross breeding of different domesticated lines as a simple way for genetic improvement in small aquaculture industries: Heterosis and inbreeding effects on growth and survival rates of the Pacific blue shrimp Penaeus (Litopenaeus) stylirostris . Aquaculture , 278(1-4), 43-50 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2008.03.018 , Open Access version : https://archimer.ifremer.fr/doc/00000/4316/
Pham Dominique, Vourey Elodie, Ansquer Dominique, Walling Emilie (2008). Biosécurité en écloserie : le rinçage des Artemia . LEADNC/Fiche Bio 2008-02 . https://archimer.ifremer.fr/doc/00118/22971/
Goarant Cyrille, Lemonnier Hugues, Mugnier Chantal, de Decker Sophie, Courties Claude, Della Patrona Luc, Herbland Alain, Herlin Jose, Reynaud Yann, Ansquer Dominique (2008). Le syndrome d'été . In Santé de la crevette d'élevage en Nouvelle-Calédonie. 2008 Herbland, Alain, Harache, Yves (Coord.). Collection : Savoir faire. ISBN 978-2-7592-0080-1. pp. 33-77 (Editions Quae, 2008) .
2007
Goyard Emmanuel, Goarant Cyrille, Ansquer Dominique, Broutoi Francis, Brun Pierre, de Decker Sophie, Dufour Robert, Galinie Christian, Maillez Jean-Rene, Peignon Jean-Marie, Pham Dominique, Vourey Elodie, Harache Yves, Patrois Jacques (2007). Introduction in New Caledonia of a population of Litopenaeus stylirostris domesticated in Hawaii. Report on reproduction performances of the Hawaiian population reared in New Caledonia after 2 years of testing . Ifremer/DAC/RC 2007-01 .
Goyard Emmanuel, Goarant Cyrille, Ansquer Dominique, Broutoi Francis, Brun Pierre, de Decker Sophie, Dufour Robert, Galinie Christian, Maillez Jean-Rene, Peignon Jean-Marie, Pham Dominique, Vourey Elodie, Harache Yves, Patrois Jacques (2007). Introduction en Nouvelle-Calédonie de la souche de crevette Litopenaeus stylirostris domestiquée à Hawaii : Bilan de l’opération après deux années de testage de performances des crevettes de types génétiques « Calédoniennes», « Hawaiiennes » et « Hybrides » . Ifremer/DAC/RST 2007-01 .
Goarant Cyrille, Reynaud Yann, de Decker Sophie, Ansquer Dominique, Herlin Jose, Wapotro B, Saulnier Denis, Le Roux Frederique (2007). Vibrio nigripulchritudo, un pathogène émergent pour la crevette d’élevage en Nouvelle-Calédonie. Fiches Biotechniques. Fiche Bio 2007-03 .
Goarant Cyrille, Reynaud Yann, Ansquer Dominique, de Decker Sophie, Merien Fabrice (2007). Sequence polymorphism-based identification and quantification of Vibrio nigripulchritudo at the species and subspecies level targeting an emerging pathogen for cultured shrimp in New Caledonia . Journal of Microbiological Methods , 70(1), 30-38 . Publisher's official version : https://doi.org/10.1016/j.mimet.2007.03.007 , Open Access version : https://archimer.ifremer.fr/doc/00000/2729/
Patrois Jacques, Goyard Emmanuel, Peignon Jean-Marie, Dufour Robert, Ansquer Dominique (2007). Sécurisation des souches de crevettes d’élevage en Nouvelle-Calédonie. Résultats de la quarantaine et du conservatoire expérimental. Eléments pour la définition d’une stratégie de sécurisation des souches de crevettes en Nouvelle-Calédonie . Ifremer/DAC/RST 2007-02 . https://archimer.ifremer.fr/doc/00117/22849/
2006
Goarant Cyrille, Reynaud Yann, Ansquer Dominique, de Decker Sophie, Saulnier Denis, Leroux Frederique (2006). Molecular epidemiology of Vibrio nigripulchritudo, a pathogen of cultured penaeid shrimp (Litopenaeus stylirostris) in New Caledonia . Systematic and Applied Microbiology , 29(7), 570-580 . Publisher's official version : https://doi.org/10.1016/j.syapm.2005.12.005 , Open Access version : https://archimer.ifremer.fr/doc/00000/1913/
Goarant Cyrille, Ansquer Dominique, Herlin Jose, Domalain David, Imbert Frederic, de Decker Sophie (2006). "Summer Syndrome" in Litopenaeus stylirostris in New Caledonia: Pathology and epidemiology of the etiological agent, Vibrio nigripulchritudo . Aquaculture , 253(1-4), 105-113 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2005.07.031 , Open Access version : https://archimer.ifremer.fr/doc/00000/1110/
2005
de Decker Sophie (2005). Contribution en Pathologie-Epidémiologie pour l'étude des mortalités saisonnières dans les élevages de crevettes Litopenaeus stylirostris en Nouvelle-Calédonie. Rapport de VCAT, septembre 2004 - août 2005. Ifremer/DAC/RST.2005.01 .
Goyard Emmanuel, Ansquer Dominique, Brun Pierre, de Decker Sophie, Dufour Robert, Goarant Cyril, Patrois Jacques, Peignon Jean, Pham Dominique (2005). Amélioration génétique pour la résistance au Syndrome 93 : bilan de 5 générations de sélection expérimentale . Ifremer/LEAD/Fiche Bio 2005-03 . https://archimer.ifremer.fr/doc/00117/22848/
Ifremer, Département Aquaculture de Calédonie (2005). Etat des connaissances sur le « Syndrome d’été » affectant les élevages de Litopenaeus stylirostris en Nouvelle-Calédonie .
2004
Le Roux Frederique, Saulnier Denis, Nicolas Jean-Louis, Paillard Christine, Goarant Cyrille, Faury Nicole, Garnier M., Ansquer Dominique (2004). Développement d'une collection de vibrions pathogènes d'espèces marines d'intérêt aquacole .
2003
Goyard Emmanuel, Goarant Cyrille, Bachere Evelyne, de Lorgeril Julien, Mugnier Chantal, Ansquer Dominique, Broutoi Francis, Brun Pierre, Imbert Frederic, Justou Carole, Maillez Jean-Rene, Patrois Jacques, Pham Dominique, Peignon Jean-Marie (2003). Amélioration génétique expérimentale de la crevette d'élevage de Nouvelle-Calédonie : Sélection d'une population de L. stylirostris résistante à la bactérie pathogène Vibrio penaeicida. Rapport final pour le Ministère de l'Outre-Mer . DRV/RST/RA/LAC/2003-14 . https://archimer.ifremer.fr/doc/00109/22020/
Avarre Jean-Christophe, Saulnier Denis, Labreuche Yannick, Ansquer Dominique, Tietz A., Lubzens Esther (2003). Response of Penaeus indicus females at two different stages of ovarian development to a lethal infection with Vibrio penaeicida . Journal of Invertebrate Pathology , 82(1), 23-33 . https://doi.org/10.1016/S0022-2011(02)00196-9
Goarant Cyrille, Ansquer Dominique, Herlin José, Domalain David, Imbert Frédéric, Marteau Anne-Laure (2003). Bases des connaissances sur l'épidémiologie de Vibrio nigripulchritudo, agent étiologique du « Syndrome d'été » chez les crevettes d’élevage en Nouvelle-Calédonie . DRV/RA/RST/2003-02 . https://archimer.ifremer.fr/doc/00715/82729/
Goarant Cyrille, Ansquer Dominique, Herlin Jose, Domalain David, Imbert Frederic, Marteau Anne-Laure (2003). Base des connaissances sur l'épidémiologie de Vibrio nigripulchritudo, agent étiologique du « Syndrome d'été » chez les crevettes d’élevage en Nouvelle-Calédonie . DRV/RA/RST/LAC-2003-02 .
Aguirre-Guzman Gabriel, Labreuche Yannick, Ansquer Dominique, Espiau Benoit, Levy Peva, Ascencio Felipe, Saulnier Denis (2003). Proteinaceous exotoxins of shrimp-pathogenic isolates of Vibrio penaeicida and Vibrio nigripulchritudo . Ciencias Marinas , 29(1), 77-88 . Open Access version : https://archimer.ifremer.fr/doc/00000/2807/
2000
Saulnier Denis, Haffner Philippe, Goarant Cyrille, Levy Peva, Ansquer Dominique (2000). Experimental infection models for shrimp vibriosis studies: a review . Aquaculture , 191(1-3), 133-144 . https://doi.org/10.1016/S0044-8486(00)00423-3
Saulnier Denis, Avarre Jean-Christophe, Le Moullac Gilles, Ansquer Dominique, Levy Peva, Vonau Vincent (2000). Rapid and sensitive PCR detection of Vibrio penaeicida, the putative etiological agent of syndrome 93 in New Caledonia . Diseases of aquatic organisms , 49(2), 109-115 . Publisher's official version : https://doi.org/10.3354/dao040109 , Open Access version : https://archimer.ifremer.fr/doc/00000/4436/
1998
Le Moullac Gilles, Soyez Claude, Saulnier Denis, Ansquer Dominique, Avarre Jean-Christophe, Levy Peva (1998). Effect of hypoxic stress on the immune response and the resistance to vibriosis of the shrimp Penaeus stylirostris . Fish & Shellfish Immunology , 8(8), 621-629 . https://doi.org/10.1006/fsim.1998.0166
1997
Le Moullac Gilles, Le Groumellec Marc, Ansquer Dominique, Froissard Sébastien, Levy Peva, Aquacop (1997). Haematological and phenoloxidase activity changes in the shrimp Penaeus stylirostris in relation with the moult cycle: protection against vibriosis . Fish & Shellfish Immunology , 7(4), 227-234 . https://doi.org/10.1006/fsim.1996.0077
1996
Nicolas Jean-Louis, Corre S, Gauthier Gilles, Robert Rene, Ansquer Dominique (1996). Bacterial problems associated with scallop Pecten maximus larval culture . Diseases Of Aquatic Organisms , 27(1), 67-76 . Publisher's official version : https://doi.org/10.3354/dao027067 , Open Access version : https://archimer.ifremer.fr/doc/00090/20077/
1992
Noel Thierry, Nicolas Jean-Louis, Boulo Viviane, Ansquer Dominique, Viaud K (1992). Elisa test with monoclonal antibody to detect Vibrio, the causal agent of the brown ring disease in Tapes philippinarum . PAMAQ 5, Fifth International colloquium on PAthology in Marine AQuaculture, 2-4 avril 1992, Montpellier, France .
Nicolas Jean-Louis, Ansquer Dominique, Cochard Jean-Claude (1992). Isolation and characterization of a pathogenic bacterium specific to Manila clam Tapes philippinarum larvae . Diseases of aquatic organisms , 14(2), 153-159 . Open Access version : https://archimer.ifremer.fr/doc/00037/14872/
1989
Nicolas Jean-Louis, Robic E, Ansquer Dominique (1989). Bacterial flora associated with a trophic chain consisting of microalgae, rotifers and turbot larvae: Influence of bacteria on larval survival . Aquaculture , 83(3-4), 237-248 . https://doi.org/10.1016/0044-8486(89)90036-7