Pierre Boudry

Pierre Boudry

Contact form

Employer : Ifremer

Site : Brest

Postal address : Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané

URL : https://annuaire.ifremer.fr/cv/15809/en/

ORCID orcid icon : 0000-0002-5150-2276

ResearcherID : G-2406-2010


Research Interests

Genetics and genomics of bivalves. 






Dataset

2019

Lapegue Sylvie, Huvet Arnaud, Quillien Virgile, Degremont Lionel, Batista Frederico, Boudry Pierre, Begout Marie-Laure (2019). Étude transcriptomique de la reproduction des huîtres du Pacifique et du Portugal. IFREMER. https://doi.org/10.12770/df5b36e7-ea13-462a-ae45-6a4ddef283bf

2018

Boudry Pierre, Pascal Favrel (2018). Séquences Sanger d'extremitées de clones BAC de Crassostrea gigas issues d'une banque fournie par P. Gaffney (Univ. Delaware). IFREMER. https://doi.org/10.12770/7a7a4171-e05a-4618-8008-ae8e3420a337
Gagnaire Pierre-Alexandre, Lamy Jean-Baptiste, Cornette Florence, Heurtebise Serge, Degremont Lionel, Flahauw Emilie, Boudry Pierre, Bierne Nicolas, Lapegue Sylvie (2018). Genome-wide differentiation patterns in native and introduced populations of the cupped oysters Crassostrea gigas and Crassostrea angulata. IFREMER. https://doi.org/10.12770/dbf64e8d-45dd-437f-b734-00b77606430a
Harney Ewan, Lachambre Sebastien, Roussel Sabine, Huchette Sylvain, Enez Florian, Morvezen Romain, Haffray Pierrick, Boudry Pierre (2018). SNP discovery and validation for parentage assignment in hatchery progeny of the European abalone Haliotis tuberculata . SEANOE . https://doi.org/10.17882/51704


Bibliography

2025

Enez Florian, Puyo Sophie, Boudry Pierre, Lapègue Sylvie, Dégremont Lionel, Gonzalez-Araya Ricardo, Morvezen Romain, Chapuis Hervé, Haffray Pierrick (2025). Strong genotype-by-environment interaction across contrasted sites for summer mortality syndrome in the Pacific oyster Crassostrea gigas . Aquaculture , 595, 741501 (12p.) . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2024.741501 , Open Access version : https://archimer.ifremer.fr/doc/00906/101788/

2024

Van Vu Sang, Kumar Manoharan, Rastas Pasi, Boudry Pierre, Gheyas Almas, Bean Tim P., Nguyen Mai Thi, Tran Khanh Dang, Geist Juergen, Nguyen Hoang Huy, O’connor Wayne, Tran Ha Luu Ngoc, Le Thang Toan, Cao Giang Truong, Nguyen Thu Thi Anh, Van Vu In (2024). High-density linkage map and single nucleotide polymorphism association with whole weight, meat yield, and shell shape in the Portuguese oyster, Crassostrea angulata . Aquaculture International , 32(7), 10109-10122 . https://doi.org/10.1007/s10499-024-01652-8
Jammes Hélène, Boudry Pierre, Maury Stéphane, (coord.) (2024). Epigénétique. Mécanismes moléculaires, biologie du développement et réponses à l’environnement . Editions Quae. https://doi.org/10.35690/978-2-7592-3770-8
Dégremont Lionel, Boudry Pierre . Inheritance and Temporal Plasticity of Simultaneous Hermaphroditism in the Pacific Oyster Crassostrea Gigas . Preprint IN PRESS . Publisher's official version : https://doi.org/10.2139/ssrn.4960382 , Open Access version : https://archimer.ifremer.fr/doc/00915/102670/

2023

Iitembu Johannes, Fitzgerald Daniel, Altintzoglou Themistoklis, Boudry Pierre, Britz Peter, Byron Carrie, Delago Daniel, Girard Sophie, Hannon Colin, Kafensztok Marcia, Lagreze Francisco, Legat Jefferson, Legat Angela, Michaelis Adriane, Pleym Ingelinn, Sühnel Simone, Walton William, Strand Åsa (2023). Comparative Description and Analysis of Oyster Aquaculture in Selected Atlantic Regions: Production, Market Dynamics, and Consumption Patterns . Fishes , 8(12), 584 (19p.) . Publisher's official version : https://doi.org/10.3390/fishes8120584 , Open Access version : https://archimer.ifremer.fr/doc/00864/97598/
Jourdan Antoine, Morvezen Romain, Enez Florian, Haffray Pierrick, Lange Adeline, Vétois Emilie, Allal Francois, Phocas Florence, Bugeon Jérôme, Dégremont Lionel, Boudry Pierre (2023). Potential of genomic selection for growth, meat content and colour traits in mixed-family breeding designs for the Pacific oyster Crassostrea gigas . Aquaculture , 576, 739878 (13p.) . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2023.739878 , Open Access version : https://archimer.ifremer.fr/doc/00846/95839/
Harney Ewan, Rastrick Samuel P. S., Artigaud Sebastien, Pisapia Julia, Bernay Benoit, Miner Philippe, Pichereau Vianney, Strand Øivind, Boudry Pierre, Charrier Gregory (2023). Impacts of ocean acidification and warming on post-larval growth and metabolism in two populations of the great scallop (Pecten maximus) . Journal Of Experimental Biology , 226(11), jeb245383 (17p.) . Publisher's official version : https://doi.org/10.1242/jeb.245383 , Open Access version : https://archimer.ifremer.fr/doc/00847/95891/
Pouvreau Stephane, Lapègue Sylvie, Arzul Isabelle, Boudry Pierre (2023). Fifty years of research to counter the decline of the European flat oyster (Ostrea edulis): a review of French achievements and prospects for the restoration of remaining beds and revival of aquaculture production . Aquatic Living Resources , 36, 13 (18p.) . Publisher's official version : https://doi.org/10.1051/alr/2023006 , Open Access version : https://archimer.ifremer.fr/doc/00836/94781/
Ermgassen Philine S. E. Zu, Strand Asa, Bakker Nienke, Blanco Ainhoa, Bonacic Kruno, Boudry Pierre, Brundu Gianni, Cameron Tom C., Connellan Iarfhlaith, Da Costa Fiz, Debney Alison, Fabra Monica, Frankic Anamarija, Gamble Celine, Gray Mathew W., Helmer Luke, Holbrook Zoe, Hugh-Jones Tristan, Kamermans Pauline, Magnesen Thorolf, Nielsen Pernille, Preston Joanne, Ranger Christopher J., Saurel Camille, Smyth David, Stechele Brecht, Theodorou John A., Colsoul Berenger (2023). Overcoming Ostrea edulis seed production limitations to meet ecosystem restoration demands in the UN decade on restoration . Aquatic Living Resources , 36(16), 6 . Publisher's official version : https://doi.org/10.1051/alr/2023012 , Open Access version : https://archimer.ifremer.fr/doc/00842/95385/
Verrier Etienne, Badeau Fantine, Basso Benjamin, Bertrand Christine, Boudry Pierre, Bouffartigue Bertrand, Charvolin-Lemaire Eléonore, Danvy Sophie, Decourtye Axel, Duclos Delphine, Ducos Alain, Gourdine Jean-Luc, Haffray Patrick, Hazard Dominique, Journaux Laurent, Laloë Denis, Lauvie Anne, Lenoir Herveline, Naves Michel, Rouger Romuald, Vandeputte Marc (2023). Les races locales menacées d’abandon en France : actualisation des listes et extension de la démarche à de nouvelles espèces / Local breeds endangered of abandonment in France: updating and extending the approach. Ethnozootechnie , (112), 93-110 .
INRAE (2023). Étude concernant l’actualisation, la définition et les exemples de valorisation des races locales, rustiques, menacées. Volet 1 - Races menacées. Actualisation des listes de races menacées Extension de la réflexion aux abeilles et aux espèces aquacoles . https://archimer.ifremer.fr/doc/00821/93305/

2022

Delisle Lizenn, Laroche Olivier, Hilton Zoë, Burguin Jean-François, Rolton Anne, Berry Jolene, Pochon Xavier, Boudry Pierre, Vignier Julien (2022). Understanding the Dynamic of POMS Infection and the Role of Microbiota Composition in the Survival of Pacific Oysters, Crassostrea gigas . Microbiology Spectrum , 10(6), e01959-22 (20p.) . Publisher's official version : https://doi.org/10.1128/spectrum.01959-22 , Open Access version : https://archimer.ifremer.fr/doc/00807/91870/
Jourdan Antoine, Morvezen Romain, Haffray Pierrick, Boudry Pierre, Allal Francois, Maurouard Elise, Marquis Florent, Heurtebise Serge, Phocas Florence, Degremont Lionel (2022). First Characterization Of Genomic Architecture For Disease Resistance In Crassostrea Gigas To Single And Dual Exposition To OsHV-1 And Vibrio Aestuarianus . ISGA XIV - XIV International Symposium on Genetics in Aquaculture. 27 november-02 December 2022, Puerto Varas, Chile .
Bean Tim P, Tanguy Arnaud, Penaloza Carolina, Gundappa Manu Kumar, Boutet Isabelle, Houston Ross D, Macqueen Daniel J, Boudry Pierre (2022). Two parallel chromosome-level reference genomes to support restoration and aquaculture of European flat oyster Ostrea edulis . Evolutionary Applications , 15(11), 1709-1712 . Publisher's official version : https://doi.org/10.1111/eva.13465 , Open Access version : https://archimer.ifremer.fr/doc/00788/90036/
Dégremont Lionel, Maurouard Elise, Jourdan Antoine, Lamy Jean-Baptiste, Boudry Pierre (2022). SNP-based parentage analyses over two successive generations demonstrates the feasibility of efficient production of inbred lines in the Pacific oyster (Crassostrea gigas) by self-fertilization of simultaneous hermaphrodites despite severe inbreeding depression . Aquaculture , 547, 737443 (5p.) . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2021.737443 , Open Access version : https://archimer.ifremer.fr/doc/00722/83375/

2021

Biogenouest (2021). Biogenouest 2021 : bilan et perspectives . Rapport de synthèse en vue de l’audit de Biogenouest par le comité scientifique d’IBiSA . https://archimer.ifremer.fr/doc/00733/84497/
Boudry Pierre, Le Roux Frederique, Mazurais David, Pernet Fabrice, Zambonino Infante Jose-Luis (2021). Rapport d’activité 2020 UNITE RBE/PFOM. Physiologie Fonctionnelle des Organismes Marins . https://archimer.ifremer.fr/doc/00705/81740/
Gourguet Sophie, Marzloff Martin, Bacher Cedric, Boudry Pierre, Cugier Philippe, Dambacher Jeffrey Mark, Desroy Nicolas, Gangnery Aline, Le Mao Patrick, Monnier Léa, Perez Jose, Thébaud Olivier (2021). Participatory Qualitative Modeling to Assess the Sustainability of a Coastal Socio-Ecological System . Frontiers In Ecology And Evolution , 9, 635857 (17p.) . Publisher's official version : https://doi.org/10.3389/fevo.2021.635857 , Open Access version : https://archimer.ifremer.fr/doc/00718/83050/
Trotter Andrew J., Vignier Julien, Wilson Teresa K., Douglas Marianne, Adams Serean L., King Nick, Cunningham Matthew P., Carter Chris G., Boudry Pierre, Petton Bruno, Dégremont Lionel, Smith Greg G., Pernet Fabrice (2021). Case study of vertical transmission of ostreid herpesvirus‐1 in Pacific oysters and biosecurity management based on epidemiological data from French, New Zealand and Australian hatchery‐propagated seed . Aquaculture Research , 52(8), 4012-4017 . https://doi.org/10.1111/are.15219
Boudry Pierre, Allal Francois, Aslam Muhammad L., Bargelloni Luca, Bean Tim P., Brard-Fudulea Sophie, Brieuc Marine S.O., Calboli Federico C.F., Gilbey John, Haffray Pierrick, Lamy Jean-Baptiste, Morvezen Romain, Purcell Catherine, Prodöhl Paulo A., Vandeputte Marc, Waldbieser Geoffrey C., Sonesson Anna K., Houston Ross D. (2021). Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries . Aquaculture Reports , 20, 100700 (14p.) . Publisher's official version : https://doi.org/10.1016/j.aqrep.2021.100700 , Open Access version : https://archimer.ifremer.fr/doc/00694/80581/
Boullot Floriane, Fabioux Caroline, Hégaret Helene, Boudry Pierre, Soudant Philippe, Benoit Evelyne (2021). Electrophysiological Evaluation of Pacific Oyster (Crassostrea gigas) Sensitivity to Saxitoxin and Tetrodotoxin . Marine Drugs , 19(7), 380 (17p.) . Publisher's official version : https://doi.org/10.3390/md19070380 , Open Access version : https://archimer.ifremer.fr/doc/00704/81561/
Colsoul Bérenger, Boudry Pierre, Pérez‐parallé María Luz, Bratoš Cetinić Ana, Hugh‐jones Tristan, Arzul Isabelle, Mérou Nicolas, Wegner Karl Mathias, Peter Corina, Merk Verena, Pogoda Bernadette (2021). Sustainable large‐scale production of European flat oyster ( Ostrea edulis ) seed for ecological restoration and aquaculture: a review . Reviews In Aquaculture , 13(3), 1423-1468 . Publisher's official version : https://doi.org/10.1111/raq.12529 , Open Access version : https://archimer.ifremer.fr/doc/00678/79001/
Boudry Pierre, Fleury Elodie, Le Roux Frederique, Zambonino Infante Jose-Luis (2021). Rapport d’activité 2018-2019 UNITE RBE/PFOM. Physiologie Fonctionnelle des Organismes Marins . https://archimer.ifremer.fr/doc/00689/80155/
Pouvreau Stephane, Cochet Hélène, Fabien Aurélie, Arzul Isabelle, Lapegue Sylvie, Gachelin Sonia, Salaun Benoit (2021). Inventaire, diagnostic écologique et restauration des principaux bancs d’huitres plates en Bretagne : le projet FOREVER . Rapport final. Contrat FEAMP 17/2215675 . https://doi.org/10.13155/79506

2020

Zu Ermgassen Philine S. E., Bonačić Kruno, Boudry Pierre, Bromley Cass A., Cameron Tom C., Colsoul Bérenger, Coolen Joop W. P., Frankić Anamarija, Hancock Boze, Have Tom M., Holbrook Zoë, Kamermans Pauline, Laugen Ane T., Nevejan Nancy, Pogoda Bernadette, Pouvreau Stephane, Preston Joanne, Ranger Christopher J., Sanderson William G., Sas Hein, Strand Åsa, Sutherland William J. (2020). Forty questions of importance to the policy and practice of native oyster reef restoration in Europe . Aquatic Conservation-marine And Freshwater Ecosystems , 30(11), 2038-2049 . Publisher's official version : https://doi.org/10.1002/aqc.3462 , Open Access version : https://archimer.ifremer.fr/doc/00658/77004/
Trenkel Verena, Boudry Pierre, Verrez-Bagnis Veronique, Lorance Pascal (2020). Methods for identifying and interpreting sex‐linked SNP markers and carrying out sex assignment: application to thornback ray ( Raja clavata ) . Molecular Ecology Resources , 20(6), 1610-1619 . Publisher's official version : https://doi.org/10.1111/1755-0998.13225 , Open Access version : https://archimer.ifremer.fr/doc/00640/75231/
Pogoda Bernadette, Boudry Pierre, Bromley Cass, Cameron Tom C., Colsoul Bérenger, Donnan David, Hancock Boze, Hugh‐jones Tristan, Preston Joanne, Sanderson William G., Sas Hein, Brown Janet, Bonacic Kruno, Nordheim Henning, Zu Ermgassen Philine S.E. (2020). NORA moving forward: Developing an oyster restoration network in Europe to support the Berlin Oyster Recommendation . Aquatic Conservation-marine And Freshwater Ecosystems , 30(11), 2031-2037 . Publisher's official version : https://doi.org/10.1002/aqc.3447 , Open Access version : https://archimer.ifremer.fr/doc/00659/77135/
Handal William, Szostek Claire, Hold Natalie, Andrello Marco, Thiébaut Eric, Harney Ewan, Lefebvre Gwendoline, Borcier Elodie, Jolivet Aurélie, Nicolle Amandine, Boyé Aurelien, Foucher Eric, Boudry Pierre, Charrier Gregory (2020). New insights on the population genetic structure of the great scallop ( Pecten maximus ) in the English Channel, coupling microsatellite data and demogenetic simulations . Aquatic Conservation-marine And Freshwater Ecosystems , 30(10), 1841-1853 . Publisher's official version : https://doi.org/10.1002/aqc.3316 , Open Access version : https://archimer.ifremer.fr/doc/00648/76025/
Goulletquer Philippe, Boulben Sylviane, Boudry Pierre, Tessier Emmanuel, Stavrakakis Christophe (2020). Avis de l'Ifremer sur le projet de serres de production de crevettes et d’algues par l’EARL CREACH ANTON . DDTM 29 - Direction Départementale des Territoires et de la Mer du Finistère, Service Eau et Biodiversité, Unité Nature et Forêt, Quimper , Ref. Ifremer-D/CB_ Avis n° 20-017 du 24/03/2020 , 12p., 1p.
ICES (2020). Working Group on Application of Genetics in Fisheries and Aquaculture (WGAGFA). ICES Scientific Reports/Rapports scientifiques du CIEM , 2(73), 80pp. Publisher's official version : https://doi.org/10.17895/ices.pub.7443 , Open Access version : https://archimer.ifremer.fr/doc/00656/76821/

2019

Vendrami David L. J., de Noia Michele, Telesca Luca, Handal William, Charrier Gregory, Boudry Pierre, Eberhart-Phillips Luke, Hoffman Joseph I. (2019). RAD sequencing sheds new light on the genetic structure and local adaptation of European scallops and resolves their demographic histories . Scientific Reports , 9(1), 7455 (13p.) . Publisher's official version : https://doi.org/10.1038/s41598-019-43939-4 , Open Access version : https://archimer.ifremer.fr/doc/00497/60901/
Pouvreau Stephane, Cochet Hélène, Gachelin Sonia, Chaudemanche Samuel, Fabien Aurélie (2019). Inventaire, diagnostic écologique et restauration des principaux bancs d’huitres plates en Bretagne : le projet FOREVER . Rapport Intermédiaire 2018. RBE/PFOM/PI 2019-3 . https://doi.org/10.13155/61629
Vendrami David L. J., Houston Ross D., Gharbi Karim, Telesca Luca, Gutierrez Alejandro P., Gurney-Smith Helen, Hasegawa Natsuki, Boudry Pierre, Hoffman Joseph I. (2019). Detailed insights into pan-European population structure and inbreeding in wild and hatchery Pacific oysters (Crassostrea gigas) revealed by genome-wide SNP data . Evolutionary Applications , 12(3), 519-534 . Publisher's official version : https://doi.org/10.1111/eva.12736 , Open Access version : https://archimer.ifremer.fr/doc/00484/59561/
Bayne B., D'Auriac M. Angles, Backeljau T., Beninger P., Boudry Pierre, Carnegie R., Davis J., Guo X., Hedgecock D., Krause M., Langdon C., Lapegue Sylvie, Manahan D., Mann R., Powell E., Shumway S. (2019). A scientific name for Pacific oysters . Aquaculture , 499, 373-373 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2018.08.048 , Open Access version : https://archimer.ifremer.fr/doc/00464/57536/
Foulon Valentin, Boudry Pierre, Artigaud Sebastien, Guérard Fabienne, Hellio Claire (2019). In Silico Analysis of Pacific Oyster (Crassostrea gigas) Transcriptome over Developmental Stages Reveals Candidate Genes for Larval Settlement . International Journal Of Molecular Sciences , 20(1), 197 (16p.) . Publisher's official version : https://doi.org/10.3390/ijms20010197 , Open Access version : https://archimer.ifremer.fr/doc/00475/58677/
Roussel Sabine, Bisch T, Lachambre S, Boudry Pierre, Gervois Jl, Lambert Christophe, Huchette S, Day R (2019). Anti-predator response of Haliotis tuberculata is modified after only one generation of domestication . Aquaculture Environment Interactions , 11, 129-142 . Publisher's official version : https://doi.org/10.3354/aei00300 , Open Access version : https://archimer.ifremer.fr/doc/00487/59841/

2018

Foulon Valentin, Artigaud Sebastien, Buscaglia Manon, Bernay Benoit, Fabioux Caroline, Petton Bruno, Elies Philippe, Boukerma Kada, Hellio Claire, Guerard Fabienne, Boudry Pierre (2018). Proteinaceous secretion of bioadhesive produced during crawling and settlement of Crassostrea gigas larvae . Scientific Reports , 8(1), 15298 (14p.) . Publisher's official version : https://doi.org/10.1038/s41598-018-33720-4 , Open Access version : https://archimer.ifremer.fr/doc/00462/57379/
de Lorgeril Julien, Lucasson Aude, Petton Bruno, Toulza Eve, Montagnani Caroline, Clerissi Camille, Vidal-Dupiol Jeremie, Chaparro Cristian, Galinier Richard, Escoubas Jean Michel, Haffner Philippe, Degremont Lionel, Charriere Guillaume, Lafont Maxime, Delort Abigail, Vergnes Agnes, Chiarello Marlene, Faury Nicole, Rubio Tristan, Leroy Marc, Perignon Adeline, Regler Denis, Morga Benjamin, Alunno-Bruscia Marianne, Boudry Pierre, Le Roux Frederique, Destoumieux-Garzon Delphine, Gueguen Yannick, Mitta Guillaume (2018). Immune-suppression by OsHV-1 viral infection causes fatal bacteraemia in Pacific oysters . Nature Communications , 9(4215), 14p. Publisher's official version : https://doi.org/10.1038/s41467-018-06659-3 , Open Access version : https://archimer.ifremer.fr/doc/00461/57234/
Chauvaud Pierre, Boudry Pierre, Grall Jacques, Charrier Gregory, Huchette Sylvain, Roussel Sabine (2018). Ranching and stock-enhancement of abalone in France . Colloque "L'ormeau européen : biologie & développement durable de la filière" / Workshop on "European abalone: biology and sustainable aquaculture". 20 et 21 septembre 2018, Aber Wrac'h .
Roussel Sabine, Lachambre Sébastien, Bisch Thomas, Gervois Jean-Lou, Boudry Pierre, Lambert Christophe, Huchette Sylvain, Day Rob (2018). Domestication of abalone : what consequences for Haliotis tuberculata behaviour, physiology and growth after one generation of selection . Colloque "L'ormeau européen : biologie & développement durable de la filière" / Workshop on "European abalone: biology and sustainable aquaculture". 20 et 21 septembre 2018, Aber Wrac'h.
Lachambre Sébastien, Roussel Sabine, Huchette Sylvain, Chenevert Kyle, Lambert Christophe, Bugeon Jerome, Bestin Anastasia, Morvezen Romain, Enez Florian, Haffray Pierrick, Boudry Pierre (2018). Mixed-family estimation of genetic parameters of growth, morphologic, immune and behavioural traits in the European abalone Haliotis tuberculata . Colloque "L'ormeau européen : biologie & développement durable de la filière" / Workshop on "European abalone: biology and sustainable aquaculture". 20 et 21 septembre 2018, Aber Wrac'h.
Morvezen Romain, Enez Florian, Harney Ewan, Boudry Pierre, Lachambre Sébastien, Haffray Pierrick (2018). Using genotyping technologies in selective breeding : existing tools, benefits and perspectives for abalone aquaculture . Colloque "L'ormeau européen : biologie & développement durable de la filière" / Workshop on "European abalone: biology and sustainable aquaculture". 20 et 21 septembre 2018, Aber Wrac'h.
Gagnaire Pierre-Alexandre, Lamy Jean-Baptiste, Cornette Florence, Heurtebise Serge, Degremont Lionel, Flahauw Emilie, Boudry Pierre, Bierne Nicolas, Lapegue Sylvie (2018). Analysis of genome-wide differentiation between native and introduced populations of the cupped oysters Crassostrea gigas and Crassostrea angulata . Genome Biology And Evolution , 10(9), 2518-2534 . Publisher's official version : https://doi.org/10.1093/gbe/evy194 , Open Access version : https://archimer.ifremer.fr/doc/00455/56622/
Boudry Pierre, Fleury Elodie, Le Roux Frederique, Zambonino-Infante Jose-Luis (2018). Rapport annuel 2017 de l’unité Physiologie Fonctionnelle des Organismes Marins (PFOM) . R.INT.RBE/PFOM 2018-1 . https://archimer.ifremer.fr/doc/00451/56298/
Gourguet Sophie, Monnier Léa, Dambacher Jeffrey, Marzloff Martin, Bacher Cedric, Boudry Pierre, Cugier Philippe, Desroy Nicolas, Gangnery Aline, Girard Sophie, Le Mao Patrick, Perez Jose, Thebaud Olivier (2018). Eliciting Stakeholder Representations of a Marine Socio-Ecosystem: Participatory Modelling of Shellfish Aquaculture in the Normand-Breton Gulf, France . Proceedings of the 9th International Congress on Environmental Modelling and Software Fort Collins, Colorado, USA, Mazdak Arabi, Olaf David, Jack Carlson, Daniel P. Ames (Eds.) https://scholarsarchive.byu.edu/iemssconference/2018/. 9p.
ICES (2018). Interim Report of the Working Group on the Application of Genetics in Fisheries and Aquaculture (WGAGFA). 15–17 May 2018 Brest, France . ICES CM 2018/ASG:03 . https://archimer.ifremer.fr/doc/00451/56299/
Boudry Pierre (2018). Recent research on biotic and abiotic factors associated with Pacific oyster mortality syndrome in France and mitigation approaches using selective breeding and aquaculture practices . First China (Rushan) International Oyster Forum. 2018, April 21 to 23 Rushan, Shandong .
Harney Ewan, Lachambre Sebastien, Roussel Sabine, Huchette Sylvain, Enez Florian, Morvezen Romain, Haffray Pierrick, Boudry Pierre (2018). Transcriptome based SNP discovery and validation for parentage assignment in hatchery progeny of the European abalone Haliotis tuberculata . Aquaculture , 491, 105-113 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2018.03.006 , Open Access version : https://archimer.ifremer.fr/doc/00429/54061/
Foulon Valentin, Boudry Pierre, Guérard Fabienne, Hellio Claire (2018). To stick underwater ? Ask to oyster larvae ! 1ères Journées de l'EDSML (École Doctorale des Sciences de la Mer et du Littoral). 13 & 14 février 2018, Brest .
Ifremer (2018). Accompagner et développer la production scientifique et technique à l’Ifremer . Rapport du groupe 2e - Réflexion stratégique 2017-2018 .
Gourguet Sophie, Marzloff Martin, Monnier Léa, Dambacher Jeffrey, Bacher Cedric, Boudry Pierre, Cugier Philippe, Desroy Nicolas, Gangnery Aline, Girard Sophie, Le Mao Patrick, Perez Jose, Thebaud Olivier (2018). Representations of a marine socioecosystem: participatory modeling of shellfish farming in the Normand-Breton Gulf, France . IIFET 2018 - International Institute of Fisheries Economics & Trade Conference. July 16-20, 2018, Seattle .

2017

Bayne B. L., Ahrens M., Allen S. K., D'Auriac M. Angles, Backeljau T., Beninger P., Bohn R., Boudry Pierre, Davis J., Green T., Guo X., Hedgecock D., Ibarra A., Kingsley-Smit P., Krause M., Langdon C., Lapegue Sylvie, Li C., Manahan D., Mann R., Perez-Paralle L., Powell E. N., Rawson P. D., Speiser D., Sanchez J. -L., Shumway S., Wang H. (2017). The Proposed Dropping of the Genus Crassostrea for All Pacific Cupped Oysters and Its Replacement by a New Genus Magallana: A Dissenting View . Journal Of Shellfish Research , 36(3), 545-547 . Publisher's official version : https://doi.org/10.2983/035.036.0301 , Open Access version : https://archimer.ifremer.fr/doc/00418/52944/
Holbach Marine, Robert Rene, Miner Philippe, Mingant Christian, Boudry Pierre, Tremblay Rejean (2017). Effects of hydrodynamic factors on Pecten maximus larval development . Aquaculture Research , 48(11), 5463-5471 . Publisher's official version : https://doi.org/10.1111/are.13361 , Open Access version : https://archimer.ifremer.fr/doc/00384/49508/
Lachambre Sebastien, Day Rob, Boudry Pierre, Huchette Sylvain, Rio-Cabello Antoine, Fustec Tirnothee, Roussel Sabine (2017). Stress response of farmed European abalone reveals rapid domestication process in absence of intentional selection . Applied Animal Behaviour Science , 196, 13-21 . Publisher's official version : https://doi.org/10.1016/j.applanim.2017.07.004 , Open Access version : https://archimer.ifremer.fr/doc/00395/50598/
Boulais Myrina, Soudant Philippe, Le Goic Nelly, Quere Claudie, Boudry Pierre, Suquet Marc (2017). ATP content and viability of spermatozoa drive variability of fertilization success in the Pacific oyster ( Crassostrea gigas ) . Aquaculture , 479, 114-119 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2017.05.035 , Open Access version : https://archimer.ifremer.fr/doc/00386/49769/
Foulon Valentin, Petton Bruno, Artigaud Sébastien, Buscaglia M, Guérard F, Hellio C, Boudry Pierre (2017). First insights into the composition of adhesive secreted by Crassostrea gigas larvae during settlement . 7th International Oyster Symposium "Sustainable expansion of global oyster production.". 11-14th September 2017, Bangor, Wales .
Gagnaire Pierre-Alexandre, Lamy Jean-Baptiste, Cornette Florence, Heurtebise Serge, Flahauw Emilie, Degremont Lionel, Auge M.T., Boudry Pierre, Bierne Nicolas, Lapegue Sylvie (2017). Genomic patterns of differentiation in native and introduced populations of the cupped oysters Crassostrea gigas and Crassostrea angulata (and in hybrid progenies) . iMarCo2017 - 3rd International Marine Connectivity Conference. September 11-13, 2017, Louvain-la-Neuve, Belgium .
Roussel Sabine, Bish Thomas, Day Rob, Boudry Pierre, Huchette Sylvain, Lambert Christophe, Lachambre Sébastien (2017). Domestication modifies behaviour of first generation of domesticated abalone . Physiomar 17. 18-21 September 2017, Cambridge, UK . https://archimer.ifremer.fr/doc/00404/51546/
Harney Ewan, Rastrick Samuel, Artigaud Sébastien, Pisapia Julia, Miner Philippe, Pichereau Vianney, Strand Oivind, Boudry Pierre, Charrier Gregory (2017). Impacts of ocean acidification and warming stress on juvenile growth and metabolism in two populations of Pecten maximus . Physiomar 17. 18-21 September 2017, Cambridge, UK . https://archimer.ifremer.fr/doc/00404/51520/
Boudry Pierre, Fleury Elodie, Le Roux Frederique, Zambonino-Infante Jose-Luis (2017). Rapport annuel 2016 de l’unité Physiologie Fonctionnelle des Organismes Marins (PFOM) . R.INT.RBE/PFOM 2017-2 .
Batista Frederico M., Fonseca Vera G., Ruano Francisco, Boudry Pierre (2017). Asynchrony in settlement time between the closely related oysters Crassostrea angulata and C. gigas in Ria Formosa lagoon (Portugal) . Marine Biology , 164(5), 110 (1-8) . https://doi.org/10.1007/s00227-017-3145-6
Danto Anatole, Boudry Pierre, Ragueneau Olivier, Maze Camille (2017). Exploitation par la pêche de coquillages d’écloserie en rade de Brest : quels acteurs pour quelles perspectives ? Séminaire Thème 2 de la Zone Atelier Brest-Iroise : "Évolution de l’écosystème rade de Brest et ses abords : historique, état actuel et projections à l’horizon 2050". 10 mars 2017, Brest . https://archimer.ifremer.fr/doc/00375/48577/
Borcier Elodie, Morvezen Romain, Boudry Pierre, Miner Philippe, Charrier Gregory, Laroche Jean, Hegaret Helene (2017). Effects of bioactive extracellular compounds and paralytic shellfish toxins produced by Alexandrium minutum on growth and behaviour of juvenile great scallops Pecten maximus . Aquatic Toxicology , 184, 142-154 . Publisher's official version : https://doi.org/10.1016/j.aquatox.2017.01.009 , Open Access version : https://archimer.ifremer.fr/doc/00368/47878/
Avia Komlan, Coelho Susana M., Montecinos Gabriel J., Cormier Alexandre, Lerck Fiona, Mauger Stephane, Faugeron Sylvain, Valero Myriam, Cock J. Mark, Boudry Pierre (2017). High-density genetic map and identification of QTLs for responses to temperature and salinity stresses in the model brown alga Ectocarpus . Scientific Reports , 7(43241), 1-15 . Publisher's official version : https://doi.org/10.1038/srep43241 , Open Access version : https://archimer.ifremer.fr/doc/00377/48779/
Azema Patrick, Lamy Jean-Baptiste, Boudry Pierre, Renault Tristan, Travers Marie-Agnes, Degremont Lionel (2017). Genetic parameters of resistance to Vibrio aestuarianus, and OsHV-1 infections in the Pacific oyster, Crassostrea gigas, at three different life stages . Genetics Selection Evolution , 49(23), 1-16 . Publisher's official version : https://doi.org/10.1186/s12711-017-0297-2 , Open Access version : https://archimer.ifremer.fr/doc/00372/48350/
Boullot Floriane, Castrec Justine, Bidault Adeline, Dantas Natanael, Payton Laura, Perrigault Mickael, Tran Damien, Amzil Zouher, Boudry Pierre, Soudant Philippe, Hegaret Helene, Fabioux Caroline (2017). Molecular Characterization of Voltage-Gated Sodium Channels and Their Relations with Paralytic Shellfish Toxin Bioaccumulation in the Pacific Oyster Crassostrea gigas . Marine Drugs , 15(1), 21 (1-23) . Publisher's official version : https://doi.org/10.3390/md15010021 , Open Access version : https://archimer.ifremer.fr/doc/00368/47877/
Lachambre Sebastien, Huchette Sylvain, Day Rob, Boudry Pierre, Rio-Cabello Antoine, Fustec Timothee, Roussel Sabine (2017). Relationships between growth, survival, physiology and behaviour — A multi-criteria approach to Haliotis tuberculata phenotypic traits . Aquaculture , 467, 190-197 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2016.04.028 , Open Access version : https://archimer.ifremer.fr/doc/00333/44434/
ICES (2017). Report of the Working Group on the Application of Genetics in Fisheries and Mariculture (WGAGFM). 2-5 May 2017 Olhão, Portugal . ICES CM 2017/SSGEPI:13 . https://archimer.ifremer.fr/doc/00388/49968/
Foulon Valentin, Boudry Pierre, Guerard Fabienne, Hellio Claire (2017). From Crassostrea gigas oyster larvae adhesion studies to potential biotechnological development of marine adhesives . 40th Annual Meeting - The Adhesive Society. February 26 - March 1, 2017, St Petersburg, Florida . https://archimer.ifremer.fr/doc/00373/48449/

2016

Lachambre Sébastien, Haffray Pierrick, Bestin Anastasia, Enez Florian, Huchette Sylvain, Boudry Pierre, Roussel Sabine (2016). Ultra-sound, a promising tool to find non-invasif proxy of foot weight and gonad development of Haliotis tuberculata? EDSM 2016 - Journées de l'Ecole Doctorale des Sciences de la Mer. 2-4 novembre 2016, Plouzané .
Grade Ana, Chairi Hicham, Lallias Delphine, Power Deborah M., Ruano Francisco, Leitao Alexandra, Drago Teresa, King Jonathan W., Boudry Pierre, Batista Frederico M. (2016). New insights about the introduction of the Portuguese oyster, Crassostrea angulata, into the North East Atlantic from Asia based on a highly polymorphic mitochondrial region . Aquatic Living Resources , 29(4), 404 (1-6) . Publisher's official version : https://doi.org/10.1051/alr/2016035 , Open Access version : https://archimer.ifremer.fr/doc/00371/48200/
Morvezen Romain, Charrier Gregory, Borcier Elodie, Laroche Jean, Boudry Pierre (2016). Microsatellite-based traceability and genetic impact on wild populations of mass release of hatchery-produced great scallops, Pecten maximus. AE2016 - Aquaculture Europe 2016 "Food for thought". September 20-23, Edinburgh, U.K.
Morvezen R., Boudry Pierre, Laroche J., Charrier G. (2016). Stock enhancement or sea ranching? Insights from monitoring the genetic diversity, relatedness and effective population size in a seeded great scallop population (Pecten maximus) . Heredity , 117(3), 142-148 . Publisher's official version : https://doi.org/10.1038/hdy.2016.42 , Open Access version : https://archimer.ifremer.fr/doc/00344/45530/
Harney Ewan, Dubief Bruno, Boudry Pierre, Basuyaux Olivier, Schilhabel Markus B., Huchette Sylvain, Paillard Christine, Nunes Flavia (2016). De novo assembly and annotation of the European abalone Haliotis tuberculata transcriptome . Marine Genomics , 28, 11-16 . Publisher's official version : https://doi.org/10.1016/j.margen.2016.03.002 , Open Access version : https://archimer.ifremer.fr/doc/00318/42940/
Lapegue Sylvie, Boudry Pierre, Huvet Arnaud, Renault Tristan (2016). Réponse à la demande d'expertise "Crassostrea angulata" de la DPMA : Synthèse bibliographique - Crassostrea angulata et Crassostrea gigas, deux espèces d'huîtres introduites en Europe . DPMA - Direction des Pêches Maritime et de l'Aquaculture, Tour Séquoïa, La Défense , Ref. Ifremer PDG/SL/16-068 - Saisine 16-9757 , 14p., 1p., 7p., 1p., 10p. https://archimer.ifremer.fr/doc/00341/45197/
Batista Frederico M., Lopez-Sanmartin Monserrat, Boudry Pierre, Navas Jose I., Ruano Francisco, Renault Tristan, Fonseca Vera G., Leitao Alexandra (2016). Insights on the association between somatic aneuploidy and ostreid herpesvirus 1 detection in the oysters Crassostrea gigas, C. angulata and their F1 hybrids . Aquaculture Research , 47(5), 1530-1536 . Publisher's official version : https://doi.org/10.1111/are.12613 , Open Access version : https://archimer.ifremer.fr/doc/00215/32581/
Epelboin Yanouk, Quintric Laure, Guevelou Eric, Boudry Pierre, Pichereau Vianney, Corporeau Charlotte (2016). The Kinome of Pacific Oyster Crassostrea gigas, Its Expression during Development and in Response to Environmental Factors . Plos One , 11(5), - . Publisher's official version : https://doi.org/10.1371/journal.pone.0155435 , Open Access version : https://archimer.ifremer.fr/doc/00340/45069/
Pouvreau Stephane (2016). Observer, Analyser et Gérer la variabilité de la reproduction et du recrutement de l’huître creuse en France : Le Réseau Velyger. Rapport annuel 2015 . R.INT.BREST RBE/PFOM/PI 2016-1 . https://archimer.ifremer.fr/doc/00334/44533/
Fleury Elodie, Dechamps Lucie, Bellec Gwenael, Quillien Virgile, Huvet Arnaud, Cochennec-Laureau Nathalie, Pouvreau Stephane, Boudry Pierre, Normand Julien (2016). ECOSCOPA : Vers l’identification de marqueurs physiologiques pour qualifier l’écosystème . Journées Observations Conchylicoles - Nantes - Février 2016 .
Morvezen Romain, Charrier Gregory, Boudry Pierre, Chauvaud Laurent, Breton Florian, Strand Oivind, Laroche Jean (2016). Genetic structure of a commercially exploited bivalve, the great scallop Pecten maximus, along the European coasts . Conservation Genetics , 17(1), 57-67 . Publisher's official version : https://doi.org/10.1007/s10592-015-0760-y , Open Access version : https://archimer.ifremer.fr/doc/00311/42251/
ICES (2016). Interim Report of the Working Group on Application of Genetics in Fisheries and Mariculture (WGAGFM), 11–13 May 2016, Belfast, UK. ICES CM 2016/SSGEPI:15. 41 pp. https://archimer.ifremer.fr/doc/00588/69965/
Boudry Pierre, Alunno-Bruscia Marianne, Zambonino-Infante Jose-Luis, Le Roux Frederique (2016). Rapport d’activité 2015 - Unité Physiologie Fonctionnelle des Organismes Marins . R.INT.BREST RBE/PFOM 2015-1 . https://archimer.ifremer.fr/doc/00346/45767/

2015

Riviere Guillaume, Klopp Christophe, Ibouniyamine Nabihoudine, Huvet Arnaud, Boudry Pierre, Favrel Pascal (2015). GigaTON: an extensive publicly searchable database providing a new reference transcriptome in the pacific oyster Crassostrea gigas . Bmc Bioinformatics , 16(401), 1-12 . Publisher's official version : https://doi.org/10.1186/s12859-015-0833-4 , Open Access version : https://archimer.ifremer.fr/doc/00302/41321/
Boulais Myrina, Soudant Philippe, Le Goic Nelly, Quere Claudie, Boudry Pierre, Suquet Marc (2015). Involvement of Mitochondrial Activity and OXPHOS in ATP Synthesis During the Motility Phase of Spermatozoa in the Pacific Oyster, Crassostrea gigas . Biology Of Reproduction , 93(5) . Publisher's official version : https://doi.org/10.1095/biolreprod.115.128538 , Open Access version : https://archimer.ifremer.fr/doc/00303/41376/
Sussarellu Rossana, Huvet Arnaud, Lapegue Sylvie, Quillen Virgile, Lelong Christophe, Cornette Florence, Jensen Lasse Fast, Bierne Nicolas, Boudry Pierre (2015). Additive transcriptomic variation associated with reproductive traits suggest local adaptation in a recently settled population of the Pacific oyster, Crassostrea gigas . Bmc Genomics , 16, - . Publisher's official version : https://doi.org/10.1186/s12864-015-1972-8 , Open Access version : https://archimer.ifremer.fr/doc/00287/39829/
Lallias Delphine, Boudry Pierre, Batista Frederico, Beaumont Andy, King Jonathan W., Turner John R., Lapegue Sylvie (2015). Invasion genetics of the Pacific oyster Crassostrea gigas in the British Isles inferred from microsatellite and mitochondrial markers . Biological Invasions , 17(9), 2581-2595 . Publisher's official version : https://doi.org/10.1007/s10530-015-0896-1 , Open Access version : https://archimer.ifremer.fr/doc/00268/37973/
Huvet Arnaud, Beguel Jean-Philippe, Pereira Cavaleiro Nathalia, Thomas Yoann, Quillien Virgile, Boudry Pierre, Alunno-Bruscia Marianne, Fabioux Caroline (2015). Disruption of amylase genes by RNA interference affects reproduction in the Pacific oyster Crassostrea gigas . Journal Of Experimental Biology , 218(11), 1740-1747 . Publisher's official version : https://doi.org/10.1242/jeb.116699 , Open Access version : https://archimer.ifremer.fr/doc/00271/38239/
Petton Bruno, Boudry Pierre, Alunno-Bruscia Marianne, Pernet Fabrice (2015). Factors influencing disease-induced mortality of Pacific oysters Crassostrea gigas . Aquaculture Environment Interactions , 6(3), 205-222 . Publisher's official version : https://doi.org/10.3354/aei00125 , Open Access version : https://archimer.ifremer.fr/doc/00257/36777/
Holbach Marine, Robert Rene, Boudry Pierre, Petton Bruno, Archambault Philippe, Tremblay Rejean (2015). Scallop larval survival from erythromycin treated broodstock after conditioning without sediment . Aquaculture , 437, 312-317 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2014.12.003 , Open Access version : https://archimer.ifremer.fr/doc/00240/35171/
Ifremer (2015). Unité Physiologie Fonctionnelle des Organismes Marins, RBE/FO à Argenton, Plouzané et Roscoff. Rapport d'activité 2014 .
ICES (2015). Report of the Working Group on the Application of Genetics in Fisheries and Mariculture (WGAGFM). 7–9 May 2014 Olhãu, Portugal . ICES CM 2014/SSGHIE:13 . https://archimer.ifremer.fr/doc/00205/31612/

2014

Dheilly Nolwenn M., Jouaux Aude, Boudry Pierre, Favrel Pascal, Lelong Christophe (2014). Transcriptomic Profiling of Gametogenesis in Triploid Pacific Oysters Crassostrea gigas: Towards an Understanding of Partial Sterility Associated with Triploidy . Plos One , 9(11), 1-9 . Publisher's official version : https://doi.org/10.1371/journal.pone.0112094 , Open Access version : https://archimer.ifremer.fr/doc/00239/34992/
Robert Rene, Holbach Marine, Miner Philippe, Mingant Christian, Boudry Pierre, Tremblay Rejean (2014). Optimization of Pecten maximus Flow-through larval rearing method . Aquaculture Europe 2014, Meeting of the European Aquaculture Society - EAS: Adding value, 14-17 octobre 2014, Donostia-San Sebastián, Spain .
Boullot Floriane, Benoit Evelyne, Castec Justine, Leitwein Maëva, Beuzit Antoine, Hegaret Helene, Boudry Pierre, Soudant Phillippe, Fabioux Caroline (2014). The voltage-gated sodium channel in the Pacific oyster Crassostrea gigas: its sensitivity to paralytic shellfish toxins produced by Alexandrium minutum . 25th Ion Channel Meeting - 25ème Colloque des Canaux Ioniques, 14-17 September, 2014, Oléron, France .
Anonyme (2014). PERLE. Programme d'expérimentation et de recherche sur l'huître plate Ostrea edulis. Rapport final de l'ensemble du projet 2011-2014. https://archimer.ifremer.fr/doc/00248/35932/
Bigot Laetitia, Beets Isabel, Dubos Marie-Pierre, Boudry Pierre, Schoofs Liliane, Favrel Pascal (2014). Functional Characterization of a short neuropeptide F-related receptor in a Lophotrochozoa, the mollusk Crassostrea gigas . Journal Of Experimental Biology , 217(16), 2974-2982 . Publisher's official version : https://doi.org/10.1242/jeb.104067 , Open Access version : https://archimer.ifremer.fr/doc/00207/31777/
Normand Julien, Li Ronghua, Quillien Virgile, Nicolas Jean-Louis, Boudry Pierre, Pernet Fabrice, Huvet Arnaud (2014). Contrasted survival under field or controlled conditions displays associations between mRNA levels of candidate genes and response to OsHV-1 infection in the Pacific oyster Crassostrea gigas . Marine Genomics , 15, 95-102 . Publisher's official version : https://doi.org/10.1016/j.margen.2014.02.002 , Open Access version : https://archimer.ifremer.fr/doc/00177/28823/
Arzul Isabelle, Baillon Laury, Boudry Pierre, Bouget Jean-Francois, Chollet Bruno, Cochet Helene, Couraleau Yann, Dubreuil Christine, Duchene Julie, Dutartre Julie, Garcia Celine, Heloury Purotu, Heurtebise Serge, Huchet Eve, Hussenot Mathieu, Langlade Aime, Ollier Simon, Omnes Emmanuelle, Pouvreau Stephane, Roby Charlotte, Serpin Delphine, Viard Frederique, Wacrenier Candice, Lapegue Sylvie (2014). PERLE - Programme d'expérimentation et de recherche sur l'huître plate Ostrea edulis - Rapport final des sous-programmes 2 et 3 . https://archimer.ifremer.fr/doc/00247/35815/
Bernard Ismael, Duchene Julie, Hily Christian, Lazure Pascal, Pouvreau Stephane, Boudry Pierre (2014). Etude de la connectivité potentielle en rade de Brest : application au cas de l'huître plate, Ostrea edulis . https://archimer.ifremer.fr/doc/00251/36233/
Lapegue Sylvie, Arzul Isabelle, Boudry Pierre, Corporeau Charlotte, Gagnaire Pierre-Alexandre, Haffray Pierrick, Huvet Arnaud, Renault Tristan (2014). Les "omiques" pour mieux comprendre et améliorer la robustesse des huîtres face aux mortalités de juvéniles et d'adultes . Xe Colloque AGENAE "Génétique et génomique animale", 12 et 13 Mai 2014, Nantes .

2013

Lallias Delphine, Boudry Pierre, Batista Frederico, Beaumont Andy, King Jon, Turner John, Lapegue Sylvie (2013). Seafare. Invasion genetics of the Pacific oyster Crassostrea gigas in the British Isles following its introduction for aquaculture production . Seminar Seafare: Supporting Sustainable Oyster Aquaculture for the Atlantic Region of Europe. 3 December 2013, London .
Sussarellu Rossana, Huvet Arnaud, Lelong Christophe, Pernet Fabrice, Quillen Virgile, Lapegue Sylvie, Cornette Florence, Jensen Lasse Fast, Bierne Nicolas, Boudry Pierre (2013). Exploring local reproductive differentiation of Pacific oyster population recently settled in northern Europe by transcriptomic approach . Workshop AQUAGENET, 28 Novembre 2013, Cadix, Spain . https://archimer.ifremer.fr/doc/00167/27815/
Holbach Marine, Miner Philippe, Mingant Christian, Boudry Pierre, Tremblay Rejean, Robert Rene (2013). La sensibilité des larves de coquilles Saint-Jacques Pecten maximus aux conditions d’élevage . Rencontres scientifiques RBE, 5-6 novembre 2013, Nantes .
Lallias Delphine, Boudry Pierre, Batista Frederico, Beaumont Andrew, King J. W., Turner J. R., Lapegue Sylvie (2013). Invasion genetics of the Pacific oyster Crassostrea gigas in the British Isles following its introduction for aquaculture production . Aquaculture 2013 Conference, 03-06 Novembre 2013, Las Palmas de Gran Canaria, Spain . https://archimer.ifremer.fr/doc/00167/27814/
Lapegue Sylvie, Flahauw Emilie, Harrang Estelle, Heurtebise Serge, Hatt Philippe-Jacques, Arzul Isabelle, Cornette Florence, Gagnaire Pierre-Alexandre, Boudry Pierre, Azema Patrick, Chapuis Herve, Haffray Pierrick (2013). Detection of QTLs and eQTLs in oysters and their potential use in selective breeding programs . Aquaculture 2013 Conference. 03-06 Novembre 2013, Las Palmas de Gran Canaria, Spain .
Rohfritsch Audrey, Bierne Nicolas, Boudry Pierre, Heurtebise Serge, Cornette Florence, Lapegue Sylvie (2013). Population genomics shed light on the demographic and adaptive histories of European invasion in the Pacific oyster, Crassostrea gigas . Evolutionary Applications , 6(7), 1064-1078 . Publisher's official version : https://doi.org/10.1111/eva.12086 , Open Access version : https://archimer.ifremer.fr/doc/00149/25977/
Guevelou Eric, Huvet Arnaud, Galindo-Sanchez Clara E., Milan Massimo, Quillien Virgile, Daniel Jean-Yves, Quere Claudie, Boudry Pierre, Corporeau Charlotte (2013). Sex-Specific Regulation of AMP-Activated Protein Kinase (AMPK) in the Pacific Oyster Crassostrea gigas . Biology Of Reproduction , 89(4), 1-15 . Publisher's official version : https://doi.org/10.1095/biolreprod.113.109728 , Open Access version : https://archimer.ifremer.fr/doc/00168/27911/
Boulais Myrina, Le Goic Nelly, Suquet Marc, Quere Claudie, Boudry Pierre, Fauvel Christian, Soudant Philippe (2013). Biological and energetic characteristics of sperm of Pacific oyster (Crassostrea gigas) in relation to its fertilization capacity . 4th International Workshop on the Biology of Fish Gametes, September 17-20 2013, Albufeira, Portugal. Book of abstracts; S1-O-10, pp. 40-41 .
Petton Bruno, Pernet Fabrice, Robert Rene, Boudry Pierre, Alunno-Bruscia Marianne (2013). Influence of temperature on disease transmission associated with ostreid herpes virus OSHV-1 µVAR in relation to survival of juvenile Crassostrea gigas . Aquaculture Europe 13 "Making Sense of Science", 9-12 August 2013, Trondheim (Norway) . https://archimer.ifremer.fr/doc/00151/26259/
Morvezen Romain, Cornette Florence, Charrier Gregory, Guinand Bruno, Lapegue Sylvie, Boudry Pierre, Laroche Jean (2013). Multiplex PCR sets of novel microsatellite loci for the great scallop Pecten maximus and their application in parentage assignment . Aquatic Living Resources , 26(3), 207-213 . Publisher's official version : https://doi.org/10.1051/alr/2013052 , Open Access version : https://archimer.ifremer.fr/doc/00137/24822/
Guevelou Eric, Huvet Arnaud, Sussarellu Rossana, Milan Massimo, Guo Ximing, Li Li, Zhang Guofan, Quillien Virgile, Daniel Jean-Yves, Quere Claudie, Boudry Pierre, Corporeau Charlotte (2013). Regulation of a truncated isoform of AMP-activated protein kinase alpha (AMPKalpha) in response to hypoxia in the muscle of Pacific oyster Crassostrea gigas . Journal Of Comparative Physiology B-biochemical Systemic And Environmental Physiology , 183(5), 597-611 . Publisher's official version : https://doi.org/10.1007/s00360-013-0743-6 , Open Access version : https://archimer.ifremer.fr/doc/00119/22998/
Genard Bertrand, Miner Philippe, Nicolas Jean-Louis, Moraga Dario, Boudry Pierre, Pernet Fabrice, Tremblay Rejean (2013). Integrative Study of Physiological Changes Associated with Bacterial Infection in Pacific Oyster Larvae . Plos One , 8(5), - . Publisher's official version : https://doi.org/10.1371/journal.pone.0064534 , Open Access version : https://archimer.ifremer.fr/doc/00144/25504/
Meistertzheim Anne-Leila, Arnaud-Haond Sophie, Boudry Pierre, Thebault Marie-Therese (2013). Genetic structure of wild European populations of the invasive Pacific oyster Crassostrea gigas due to aquaculture practices . Marine Biology , 160(2), 453-463 . Publisher's official version : https://doi.org/10.1007/s00227-012-2102-7 , Open Access version : https://archimer.ifremer.fr/doc/00119/23051/
Sussarellu Rossana, Soudant Philippe, Fabioux Caroline, Hegaret Helene, Le Goic Nelly, Lambert Christophe, Long Marc, Daniel Jean-Yves, Quillien Virgile, Quere Claudie, Epelboin Yanouk, Mingant Christian, Petton Bruno, Baud Dominique, Queau Isabelle, Le Souchu Pierrick, Miner Philippe, Huelvan Christine, Le Delliou Herve, Le Gall Marie-Madeleine, Severe Armelle, Mazurais David, Zambonino-Infante Jose Luis, Pouvreau Stephane, Robert Rene, Corporeau Charlotte, Boudry Pierre, Huvet Arnaud (2013). Les microplastiques : sont-ils une menace pour la zone des 2 Mers ? Projet Interreg MICRO . Journées conchylicoles Ifremer 2013, 23-25 janvier, Roscoff .
Petton Bruno, Pernet Fabrice, Robert Rene, Boudry Pierre (2013). Temperature influence on pathogen transmission and subsequent mortalities in juvenile Pacific oysters Crassostrea gigas . Aquaculture Environment Interactions , 3(3), 257-273 . Publisher's official version : https://doi.org/10.3354/aei00070 , Open Access version : https://archimer.ifremer.fr/doc/00148/25891/
Kamermans P., Galley T., Boudry Pierre, Fuentes J., McCombie Helen, Batista Frederico, Blanco A., Dominguez L., Cornette Florence, Pincot L., Beaumont Andrew (2013). Blue mussel hatchery technology in Europe . In Advances in Aquaculture Hatchery Technology. A volume in Woodhead Publishing Series in Food Science, Technology and Nutrition. 2013. Edited by:G. Allan and G. Burnell. ISBN: 978-0-85709-119-2. Chap.11, pp.339-373 (Woodhead Publishing) .

2012

Lallias Delphine, Boudry Pierre, Arzul Isabelle, Robert Rene, Lapegue Sylvie (2012). Genetics insights into flat oyster restauration programmes . International workshop : Feasibility of the restoration of the European flat oyster in the German Bight by the Federal Agency for Nature Conservation (BfN) at the International Academy for Nature Conservation organised by the Institute of Applied Ecology (IfAÖ), Neu Broderstorf , 15th to 16th November 2012, Isle of Vilm .
Corporeau Charlotte, Vanderplancke Gwenaelle, Boulais Myrina, Suquet Marc, Quere Claudie, Boudry Pierre, Huvet Arnaud, Madec Stephanie (2012). Proteomic identification of quality factors for oocytes in the Pacific oyster Crassostrea gigas . Journal Of Proteomics , 75(18), 5554-5563 . Publisher's official version : https://doi.org/10.1016/j.jprot.2012.07.040 , Open Access version : https://archimer.ifremer.fr/doc/00098/20925/
Lapegue Sylvie, Li Ronghua, Cornette Florence, Heurtebise Serge, Harrang Estelle, Morga Benjamin, Flahauw Emilie, Rohfritsch Audrey, Degremont Lionel, Haffray Pierrick, Bierne Nicolas, Boudry Pierre (2012). Recent advances in the developpement and use of molecular markers in oysters . World Aquaculture Society - Aqua 2012 - Prague, Czech Republic "Oysters, Pearl Oysters, Scallops, Clams, Abalone" - Monday, September 03, 2012 .
Huvet Arnaud, Jeffroy Fanny, Daniel Jean-Yves, Quere Claudie, Le Souchu Pierrick, Van Wormhoudt A., Boudry Pierre, Moal Jeanne, Samain Jean-Francois (2012). Starch supplementation modulates amylase enzymatic properties and amylase B mRNA level in the digestive gland of the Pacific oyster Crassostrea gigas . Comparative Biochemistry And Physiology B-biochemistry & Molecular Biology , 163(1), 96-100 . Publisher's official version : https://doi.org/10.1016/j.cbpb.2012.05.003 , Open Access version : https://archimer.ifremer.fr/doc/00087/19869/
Morvezen Romain, Li Ronghua, Cornette Florence, Charrier Grégory, Laroche Jean, Boudry Pierre, Lapegue Sylvie (2012). Multiplex PCRs for parentage analyses and population genetics studies of two bivalve species of economic interest . PHYSIOMAR 2012, 4-9 Septembre 2012, International Meeting, Santiago de Compostela, Spain .
Huvet Arnaud, Fleury Elodie, Corporeau Charlotte, Quillien Virgile, Daniel Jean-Yves, Riviere Guillaume, Boudry Pierre, Fabioux Caroline (2012). In Vivo RNA Interference of a Gonad-Specific Transforming Growth Factor-beta in the Pacific Oyster Crassostrea gigas . Marine Biotechnology , 14(4), 402-410 . Publisher's official version : https://doi.org/10.1007/s10126-011-9421-4 , Open Access version : https://archimer.ifremer.fr/doc/00087/19794/
Dheilly Nolwenn, Lelong Christophe, Huvet Arnaud, Kellner Kristell, Dubos Marie-Pierre, Riviere Guillaume, Boudry Pierre, Favrel Pascal (2012). Gametogenesis in the Pacific Oyster Crassostrea gigas: A Microarrays-Based Analysis Identifies Sex and Stage Specific Genes . Plos One , 7(5) . Publisher's official version : https://doi.org/10.1371/journal.pone.0036353 , Open Access version : https://archimer.ifremer.fr/doc/00087/19862/
Genard Bertrand, Moraga Dario, Pernet Fabrice, David Elise, Boudry Pierre, Tremblay Rejean (2012). Expression of candidate genes related to metabolism, immunity and cellular stress during massive mortality in the American oyster Crassostrea virginica larvae in relation to biochemical and physiological parameters . Gene , 499(1), 70-75 . Publisher's official version : https://doi.org/10.1016/j.gene.2012.02.021 , Open Access version : https://archimer.ifremer.fr/doc/00075/18585/
(2012) Les surmortalités des naissains d'huîtres creuses Crassostrea gigas - journée d'information et d'échanges du 18 janvier 2012 . https://archimer.ifremer.fr/doc/00084/19574/
Robert Rene, Bedier Edouard, Petton Bruno, Barret Jean, Renault Tristan, Arzul Isabelle, Boudry Pierre (2012). Oyster farming in France (2012) . Workshop sur l'huître plate, Program Nord-Orström meeting, Strömstadt (Suède), 24-25th April 2012 .
Bigot Laetitia, Zatylny-Gaudin Celine, Rodet Franck, Bernay Benoit, Boudry Pierre, Favrel Pascal (2012). Characterization of GnRH-related peptides from the Pacific oyster Crassostrea gigas . Peptides , 34(2), 303-310 . Publisher's official version : https://doi.org/10.1016/j.peptides.2012.01.017 , Open Access version : https://archimer.ifremer.fr/doc/00079/19003/
Bernard Ismael, Lapegue Sylvie, Dumas Franck, Talarmain Eric, Cornette Florence, Degremont Lionel, Chavanne Herve, Pouvreau Stephane, Auby Isabelle, Maurer Daniele, Plus Martin, Le Moine Olivier, Boudry Pierre (2012). Etude de faisabilité d’opérations de ‘repeuplement orienté’ dans deux sites français de captage de l’huître creuse (Crassostrea gigas) . R.INT.BREST RBE/PFOM/PI 2012-2 . https://archimer.ifremer.fr/doc/00083/19410/
Bigot L., Dubos M. P., Dheilly N., Favrel P., Kellner K., Lelong C., Martinez A. S., Riviere G., Santerre C., Sourdaine P., Degremont Lionel, Flahauw Emilie, Hatt Philippe-Jacques, Heurtebise Serge, Lapegue Sylvie, Azzouzi N., Galibert F., Boudry Pierre, Corporeau Charlotte, Fabioux Caroline, Guevelou Eric, Huvet Arnaud, Sussarellu Rossana (2012). Etude transcriptomique, génétique et fonctionnelle de la gamétogenèse chez l'huître creuse Crassostrea gigas . Colloque AGENAE-GENANIMAL, La Rochelle, 20-21 Mars 2012 . https://archimer.ifremer.fr/doc/00107/21781/

2011

Fleury Elodie, Normand Julien, Fabioux Caroline, Daniel Jean-Yves, Quillien Virgile, Degremont Lionel, Nicolas Jean-Louis, Boudry Pierre, Pernet Fabrice, Huvet Arnaud (2011). Identification de gènes associés à la survie estivale de l’huître Crassostrea gigas: perspectives pour la compréhension des mécanismes de résistance . Journées d'échange et d'information « Surmortalité des huîtres creuses », 29 et 30 novembre 2011, Nantes .
Nicolas Jean-Louis, Robert Rene, Boudry Pierre (2011). REPROSEED April 2010-March 2014 : REsearch to improve PROduction of SEED of established and emerging bivalve species in European hatcheries . Aquaculture Europe 2011 "Mediterranean Aquaculture 2020", 18-21 Octobre 2011, Rhodes, Greece .
Robert Rene, Nicolas Jean-Louis, Boudry Pierre (2011). Improvement of hatchery mollusk seed production: REPROSEED European project. Aquaculture Europe 2011 "Mediterranean Aquaculture 2020", 18-21 Octobre 2011, Rhodes, Greece .
Pernet Fabrice, Barret Jean, Le Gall Patrik, Lagarde Franck, Fiandrino Annie, Huvet Arnaud, Corporeau Charlotte, Boudry Pierre, Quere Claudie, Degremont Lionel, Pepin Jean-Francois, Saulnier Denis, Boulet Hélène, Keck Nicolas (2011). Mortalités massives de l’Huître creuse: causes et perspectives . RST/LER/LR 11-013 . https://archimer.ifremer.fr/doc/00043/15404/
Genard Bertrand, Pernet Fabrice, Lemarchand Karine, Boudry Pierre, Moraga Dario, Tremblay Rejean (2011). Physiological and biochemical changes associated with massive mortality events occurring in larvae of American oyster (Crassostrea virginica) . Aquatic Living Resources , 24(3), 247-260 . Publisher's official version : https://doi.org/10.1051/alr/2011114 , Open Access version : https://archimer.ifremer.fr/doc/00051/16231/
Nicolas Jean-Louis, Boudry Pierre, Robert Rene, Corporeau Charlotte, Huvet Arnaud, Suquet Marc (2011). REsearch to improve PROduction of SEED of established and emerging bivalve species in European hatcheries . PFOM/LPI/EU .
Cochennec-Laureau Nathalie, Baud Jean-Pierre, Pepin Jean-Francois, Benabdelmouna Abdellah, Soletchnik Patrick, Lupo Coralie, Garcia Celine, Arzul Isabelle, Boudry Pierre, Huvet Arnaud, Pernet Fabrice, Bachere Evelyne, Bedier Edouard, Petton Bruno, Gaussem Florian, Stanisiere Jean-Yves, Degremont Lionel (2011). Les surmortalités des naissains d’huîtres creuses, Crassostrea gigas : acquis des recherches en 2010 . RST/LER/MPL/11.07 . https://archimer.ifremer.fr/doc/00033/14423/
Lazoski C., Gusmao J., Boudry Pierre, Sole-Cava A. M. (2011). Phylogeny and phylogeography of Atlantic oyster species: evolutionary history, limited genetic connectivity and isolation by distance . Marine Ecology-progress Series , 426, 197-212 . Publisher's official version : https://doi.org/10.3354/meps09035 , Open Access version : https://archimer.ifremer.fr/doc/00033/14464/
de Decker Sophie, Normand Julien, Saulnier Denis, Pernet Fabrice, Castagnet Sophie, Boudry Pierre (2011). Responses of diploid and triploid Pacific oysters Crassostrea gigas to Vibrio infection in relation to their reproductive status . Journal Of Invertebrate Pathology , 106(2), 179-191 . Publisher's official version : https://doi.org/10.1016/j.jip.2010.09.003 , Open Access version : https://archimer.ifremer.fr/doc/00030/14108/

2010

Degremont Lionel, Soletchnik Patrick, Boudry Pierre (2010). Summer mortality of selected juvenile pacific oyster Crassostrea gigas under laboratory conditions and in comparison with field performance . Journal Of Shellfish Research , 29(4), 847-856 . Publisher's official version : https://doi.org/10.2983/035.029.0419 , Open Access version : https://archimer.ifremer.fr/doc/00013/12432/
Lapegue Sylvie, Heurtebise Serge, Harrang Estelle, Morga Benjamin, Flahauw Emilie, Sauvage Christopher, Boudry Pierre (2010). The use of SNPs in characterizing oysters genomes and their resistance to pathogens . Aquaculture Europe - The annual meeting of the European Aquaculture Society, Porto, Portugal October 5-8, 2010 . https://archimer.ifremer.fr/doc/00015/12584/
Lallias Delphine, Boudry Pierre, Lapegue Sylvie, King Jon W., Beaumont Andy R. (2010). Strategies for the retention of high genetic variability in European flat oyster (Ostrea edulis) restoration programmes . Conservation Genetics , 11(5), 1899-1910 . Publisher's official version : https://doi.org/10.1007/s10592-010-0081-0 , Open Access version : https://archimer.ifremer.fr/doc/00001/11259/
Holbach Marine, Tremblay Rejean, Boudry Pierre, Robert Rene (2010). Optimisation of Pectinid hatchery larval production by controlling flow-through system . PHYSIOMAR 10, 31 September-04 October 2010, Québec .
Rohfritsch Audrey, Bierne Nicolas, Boudry Pierre, Heurtebise Serge, Cornette Florence, Lapegue Sylvie (2010). Génomique de l'adaptation de l'huître creuse, Crassostrea gigas, dans le contexte de sa récente expansion géographique en Europe . Colloque "Ecologie 2010", INRA - CNRS - Premier colloque national d'écologie scientifique, 2-4 septembre 2010, Montpellier . https://archimer.ifremer.fr/doc/00014/12552/
Geay Florian, Culi E. Santigosa I., Corporeau Charlotte, Boudry Pierre, Dreano Y., Corcos L., Bodin Nathalie, Vandeputte Marc, Zambonino-Infante Jose-Luis, Mazurais David, Cahu Chantal (2010). Regulation of FADS2 expression and activity in European sea bass (Dicentrarchus labrax, L.) fed a vegetable diet . Comparative Biochemistry And Physiology B-biochemistry & Molecular Biology , 156(4), 237-243 . Publisher's official version : https://doi.org/10.1016/j.cbpb.2010.03.008 , Open Access version : https://archimer.ifremer.fr/doc/00008/11929/
Sauvage Christopher, Boudry Pierre, de Koning D. -J., Haley C. S., Heurtebise Serge, Lapegue Sylvie (2010). QTL for resistance to summer mortality and OsHV-1 load in the Pacific oyster (Crassostrea gigas) . Animal Genetics , 41(4), 390-399 . Publisher's official version : https://doi.org/10.1111/j.1365-2052.2009.02018.x , Open Access version : https://archimer.ifremer.fr/doc/00011/12241/
Huvet Arnaud, Normand Julien, Fleury Elodie, Quillien Virgile, Fabioux Caroline, Boudry Pierre (2010). Reproductive effort of Pacific oysters: A trait associated with susceptibility to summer mortality . Aquaculture , 304(1-4), 95-99 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2010.03.022 , Open Access version : https://archimer.ifremer.fr/doc/00006/11766/
Fleury Elodie, Moal Jeanne, Boulo Viviane, Daniel Jean-Yves, Mazurais David, Henaut Alain, Corporeau Charlotte, Boudry Pierre, Favrel Pascal, Huvet Arnaud (2010). Microarray-Based Identification of Gonad Transcripts Differentially Expressed Between Lines of Pacific Oyster Selected to Be Resistant or Susceptible to Summer Mortality . Marine Biotechnology , 12(3), 326-339 . Publisher's official version : https://doi.org/10.1007/s10126-009-9227-9 , Open Access version : https://archimer.ifremer.fr/doc/00005/11590/
Ifremer, Université de Nantes (2010). Gestion globale des ressources marines et des risques dans les espaces côtiers. Gerrico. Volume 1 : rapport de synthèse. Volume 2 : Fiches actions par axe . https://archimer.ifremer.fr/doc/00136/24733/
Lallias Delphine, Taris Nicolas, Boudry Pierre, Bonhomme Francois, Lapegue Sylvie (2010). Variance in the reproductive success of flat oyster Ostrea edulis L. assessed by parentage analyses in natural and experimental conditions . Genetics Research , 92(3), 175-187 . Publisher's official version : https://doi.org/10.1017/S0016672310000248 , Open Access version : https://archimer.ifremer.fr/doc/00012/12329/
Pernet Fabrice, Barret Jean, Le Gall Patrik, Malet Nathalie, Pastoureaud Annie, Munaron Dominique, de Lorgeril Julien, Bachere Evelyne, Vaquer Andre, Huvet Arnaud, Corporeau Charlotte, Normand Julien, Boudry Pierre, Moal Jeanne, Quere Claudie, Quilien Virgile, Daniel Jean-Yves, Pepin Jean-Francois, Saulnier Denis, Gonzalez Jean-Louis (2010). Mortalité du naissain d’Huître creuse Crassostrea gigas dans l’étang de Thau en 2009 . RST.DOP/LER/LR 10-008 . https://archimer.ifremer.fr/doc/00002/11354/
Degremont Lionel, Boudry Pierre, Ropert Michel, Samain Jean-Francois, Bedier Edouard, Soletchnik Patrick (2010). Effects of age and environment on survival of summer mortality by two selected groups of the Pacific oyster Crassostrea gigas . Aquaculture , 299(1-4), 44-50 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2009.12.009 , Open Access version : https://archimer.ifremer.fr/doc/00000/6972/
Degremont Lionel, Bedier Edouard, Boudry Pierre (2010). Summer mortality of hatchery-produced Pacific oyster spat (Crassostrea gigas). II. Response to selection for survival and its influence on growth and yield . Aquaculture , 299(1-4), 21-29 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2009.11.017 , Open Access version : https://archimer.ifremer.fr/doc/00000/6950/
Pernet Fabrice, Barret Jean, Marty Claire, Moal Jeanne, Le Gall Patrik, Boudry Pierre (2010). Environmental anomalies, energetic reserves and fatty acid modifications in oysters coincide with an exceptional mortality event . Marine Ecology-progress Series , 401, 129-146 . Publisher's official version : https://doi.org/10.3354/meps08407 , Open Access version : https://archimer.ifremer.fr/doc/00003/11388/
Cochennec-Laureau Nathalie, Baud Jean-Pierre, Bedier Edouard, Boudry Pierre, Huvet Arnaud, Nicolas Jean-Louis, Pepin Jean-Francois, Petton Bruno (2010). Bilan des « Journées Surmortalité des huîtres creuses, Crassostrea gigas » du Programme P7 « Aquaculture Durable » des 8 et 9 décembre 2009 . Bilan des « Journées Surmortalité des huîtres creuses du Programme P7 » 2009 . https://archimer.ifremer.fr/doc/00000/7393/
Cancela M. Leonor, Bargelloni Luca, Boudry Pierre, Boulo Viviane, Dias Jorge, Huvet Arnaud, Laize Vincent, Lapegue Sylvie, Leite Ricardo, Mira Sara, Nielsen Einar E., Planas Josep V., Roher Nerea, Sarropoulou Elena, Volckaert Filip A. M. (2010). Genomic Approaches in Aquaculture and Fisheries . In Introduction to marine genomics (Springer) .

2009

Taris Nicolas, Boudry Pierre, Bonhomme Francois, Camara Mark D., Lapegue Sylvie (2009). Mitochondrial and Nuclear DNA Analysis of Genetic Heterogeneity Among Recruitment Cohorts of the European Flat Oyster Ostrea edulis . Biological bulletin , 217(3), 233-241 . Open Access version : https://archimer.ifremer.fr/doc/00000/7399/
Normand Julien, Ernande Bruno, Haure Joel, McCombie Helen, Boudry Pierre (2009). Reproductive effort and growth in Crassostrea gigas: comparison of young diploid and triploid oysters issued from natural crosses or chemical induction . Aquatic Biology , 7(3), 229-241 . Publisher's official version : https://doi.org/10.3354/ab00190 , Open Access version : https://archimer.ifremer.fr/doc/00000/6978/
Lallias Delphine, Gomez-Raya L., Haley C. S., Arzul Isabelle, Heurtebise Serge, Beaumont A. R., Boudry Pierre, Lapegue Sylvie (2009). Combining Two-Stage Testing and Interval Mapping Strategies to Detect QTL for Resistance to Bonamiosis in the European Flat Oyster Ostrea edulis . Marine Biotechnology , 11(5), 570-584 . Publisher's official version : https://doi.org/10.1007/s10126-008-9173-y , Open Access version : https://archimer.ifremer.fr/doc/00000/6682/
Cannuel Rozenn, Beninger Peter G., McCombie Helen, Boudry Pierre (2009). Gill Development and Its Functional and Evolutionary Implications in the Blue Mussel Mytilus edulis (Bivalvia: Mytilidae) . Biological bulletin , 217(2), 173-188 . Open Access version : https://archimer.ifremer.fr/doc/00000/6935/
Arias A., Freire R., Boudry Pierre, Heurtebise Serge, Mendez J., Insua A. (2009). Single nucleotide polymorphism for population studies in the scallops Aequipecten opercularis and Mimachlamys varia . Conservation Genetics , 10(5), 1491-1495 . https://doi.org/10.1007/s10592-008-9766-z
Lallias Delphine, Stockdale Ruth, Boudry Pierre, Lapegue Sylvie, Beaumont Andy R. (2009). Characterization of ten microsatellite loci in the blue mussel Mytilus edulis . Journal Of Shellfish Research , 28(3), 547-551 . Open Access version : https://archimer.ifremer.fr/doc/00002/11275/
Milan Massimo, Fleury Elodie, Huvet Arnaud, Guevelou Eric, Boudry Pierre, Moal Jeanne, Corporeau Charlotte (2009). NPY signaling for reproduction in the Pacific oyster: not so far from human! Genomics in Aquaculture International symposium, July 2009, Bodø University College .
Fleury Elodie, Huvet Arnaud, Lelong Christophe, de Lorgeril Julien, Boulo Viviane, Gueguen Yannick, Bachere Evelyne, Tanguy Arnaud, Moraga Dario, Fabioux Caroline, Lindeque Penelope, Shaw Jenny, Reinhardt Richard, Prunet Patrick, Davey Grace, Lapegue Sylvie, Sauvage Christopher, Corporeau Charlotte, Moal Jeanne, Gavory Frederick, Wincker Patrick, Moreews Francois, Klopp Christophe, Mathieu Michel, Boudry Pierre, Favrel Pascal (2009). Generation and analysis of a 29,745 unique Expressed Sequence Tags from the Pacific oyster (Crassostrea gigas) assembled into a publicly accessible database: the GigasDatabase . BMC Genomics , 10(341), 1-15 . Publisher's official version : https://doi.org/10.1186/1471-2164-10-341 , Open Access version : https://archimer.ifremer.fr/doc/00000/6770/
Sauvage Christopher, Pepin Jean-Francois, Lapegue Sylvie, Boudry Pierre, Renault Tristan (2009). Ostreid herpes virus 1 infection in families of the Pacific oyster, Crassostrea gigas, during a summer mortality outbreak: Differences in viral DNA detection and quantification using real-time PCR . Virus Research , 142(1-2), 181-187 . Publisher's official version : https://doi.org/10.1016/j.virusres.2009.02.013 , Open Access version : https://archimer.ifremer.fr/doc/00000/6265/
Silvain Jean-François, Le Roux Xavier, Babin Didier, Barbault Robert, Bertin Philippe, Bodo Bernard, Boude Jean-Pierre, Boudry Pierre, Bourgoin Thierry, Boyen Catherine, Cormier-Salem Marie-Christine, Courchamps Franck, Couvet Denis, David Bruno, Delay Bernard, Doussan Isabelle, Jaskulke Elisabeth, Lavorel Sandra, Leadley Paul, Lefèvre François, Leriche Hélène, Letourneux François, Los Wouter, Mesleard François, Morand Serge, Schmidt-Lainé Claudine, Siclet Françoise, Verrier Etienne (2009). Prospective pour la recherche française en biodiversité . Fondation pour la recherche sur la biodiversité, 96pp.
Lallias Delphine, Stockdale Ruth, Boudry Pierre, Beaumont Andy R., Lapegue Sylvie (2009). Characterization of 27 microsatellite loci in the European flat oyster Ostrea edulis . Molecular Ecology Resources , 9(3), 960-963 . Publisher's official version : https://doi.org/10.1111/j.1755-0998.2009.02515.x , Open Access version : https://archimer.ifremer.fr/doc/00341/45195/
Sauvage Christopher, Boudry Pierre, Lapegue Sylvie (2009). Identification and characterization of 18 novel polymorphic microsatellite makers derived from expressed sequence tags in the Pacific oyster Crassostrea gigas . Molecular Ecology Resources , 9(3), 853-855 . Publisher's official version : https://doi.org/10.1111/j.1755-0998.2009.02525.x , Open Access version : https://archimer.ifremer.fr/doc/00000/6419/
Batista F. M., Boudry Pierre, Dos Santos A., Renault Tristan, Ruano F. (2009). Infestation of the cupped oysters Crassostrea angulata, C. gigas and their first-generation hybrids by the copepod Myicola ostreae: differences in susceptibility and host response . Parasitology , 136(5), 537-543 . Publisher's official version : https://doi.org/10.1017/S0031182009005691 , Open Access version : https://archimer.ifremer.fr/doc/00000/6442/
Boudry Pierre (2009). Genetic variation and selective breeding in hatchery-propagated molluscan shellfish . In New technologies in aquaculture: improving production efficiency, quality & environmental management (Woodhead Publ Ltd) .

2008

Huvet Arnaud, Jeffroy F, Fabioux C, Daniel Jean-Yves, Quillien Virgile, Van Wormhoudt A, Moal Jeanne, Samain Jean-Francois, Boudry Pierre, Pouvreau Stephane (2008). Association among growth, food consumption-related traits and amylase gene polymorphism in the Pacific oyster Crassostrea gigas . Animal Genetics , 39(6), 662-665 . Publisher's official version : https://doi.org/10.1111/j.1365-2052.2008.01776.x , Open Access version : https://archimer.ifremer.fr/doc/00000/5165/
Dridi S., Romdhane M. S., Heurtebise Serge, El Cafsi M., Boudry Pierre, Lapegue Sylvie (2008). Genetic characterisation of oyster populations along the north-eastern coast of Tunisia . African Journal Of Marine Science , 30(3), 489-495 . Publisher's official version : https://doi.org/10.2989/AJMS.2008.30.3.4.638 , Open Access version : https://archimer.ifremer.fr/doc/00000/11063/
Lallias Delphine, Arzul Isabelle, Heurtebise Serge, Ferrand Sylvie, Chollet Bruno, Robert Maeva, Beaumon Andy, Boudry Pierre, Morga Benjamin, Lapegue Sylvie (2008). Bonamia ostreae-induced mortalities in one-year old European flat oysters Ostrea edulis: experimental infection by cohabitation challenge . Aquatic Living Resources , 21, 423-439 . Publisher's official version : https://doi.org/10.1051/alr:2008053 , Open Access version : https://archimer.ifremer.fr/doc/00000/4783/
Rohfritsch Audrey, Bierne Nicolas, Boudry Pierre, Heurtebise Serge, Lapegue Sylvie (2008). Scanning the genome of the Pacific cupped oyster, Crassostrea gigas, for adaptative differentiation during geographic range expansion . 1st World Conference on Marine Biodiversity. 11-15 Novembre 2008 , Valence, Espagne .
Corporeau Charlotte, Fleury Elodie, Moal Jeanne, Boudry Pierre, Favrel Pascal, Huvet Arnaud (2008). NPY signalling in the gonad of the oyster Crassostrea gigas : involvement in summer mortality? LARC-Neuroscience Network 12th Annual Meeting, Rouen, France, October 17, 2008 . https://archimer.ifremer.fr/doc/00083/19424/
Lallias Delphine, Stockdale Ruth, Lapegue Sylvie, Boudry Pierre, Beaumont Andy (2008). Microsatellites development in Ostrea edulis and Mytilus edulis . Physiomar 08 Physilogical aspects of reproduction, nutrition and growth "Marine molluscs in a changing environment" . https://archimer.ifremer.fr/doc/00000/4536/
Lallias Delphine, Arzul Isabelle, Heurtebise Serge, Ferrand Sylvie, Chollet Bruno, Robert Maeva, Beaumont Andrew, Boudry Pierre, Morga Benjamin, Lapegue Sylvie (2008). Bonamia-ostreae induced mortalities in one-year old European flat oysters Ostrea edulis: experimental infection by cohabitation challenge . Physiomar 08 Physilogical aspects of reproduction, nutrition and growth "Marine molluscs in a changing environment" . https://archimer.ifremer.fr/doc/00000/4535/
Normand Julien, Ernande Bruno, Boudry Pierre (2008). Genetic basis of gametogenesis in diploid and triploid Pacific oysters, Crassostrea gigas . Physiomar 08 - Physilogical aspects of reproduction, nutrition and growth "Marine molluscs in a changing environment". 01 au 04 septembre 2008, Brest .
Sauvage Christopher, Boudry Pierre, de Koning Dirk-Jan, Haley Chris, Heurtebise Serge, Lapegue Sylvie (2008). Mapping QTL for Resistance to Summer Mortality in the Pacific Oyster Crassostrea gigas . Physiomar 08 - Physilogical aspects of reproduction, nutrition and growth "Marine molluscs in a changing environment". 01 au 04 septembre 2008, Brest .
Fabioux Caroline, Fleury Elodie, Normand Julien, Quillien Virgile, Boudry Pierre, Huvet Arnaud (2008). The partial sterility of triploid oysters. Cellular and molecular investigation . Physiomar 08 - Physilogical aspects of reproduction, nutrition and growth "Marine molluscs in a changing environment". 01 au 04 septembre 2008, Brest .
Rohfritsch Audrey, Bierne Nicolas, Boudry Pierre, Heurtebise Serge, Lapegue Sylvie (2008). Génomique de l'adaptation de l'huître creuse du Pacifique, Crassostrea gigas, dans le cadre de son expansion géographique . Physiomar 08 - Physilogical aspects of reproduction, nutrition and growth "Marine molluscs in a changing environment". 01 au 04 septembre 2008, Brest .
Arnaud-Haond Sophie, Vonau Vincent, Rouxel Catherine, Bonhomme Francois, Prou Jean, Goyard Emmanuel, Boudry Pierre (2008). Genetic structure at different spatial scales in the pearl oyster (Pinctada margaritifera cumingii) in French Polynesian lagoons: beware of sampling strategy and genetic patchiness . Marine Biology , 155(2), 147-157 . Publisher's official version : https://doi.org/10.1007/s00227-008-1013-0 , Open Access version : https://archimer.ifremer.fr/doc/00000/4960/
Normand Julien, Le Pennec Marcel, Boudry Pierre (2008). Comparative histological study of gametogenesis in diploid and triploid pacific oysters (Crassostrea gigas) reared in an estuarine farming site in France during the 2003 heatwave . Aquaculture , 282(1-4), 124-129 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2008.06.026 , Open Access version : https://archimer.ifremer.fr/doc/00000/4152/
Batista Frederico, Ben-Hamadou Radhouan, Fonseca Vera, Taris Nicolas, Ruano Francisco, Reis-Henriques Maria, Boudry Pierre (2008). Comparative study of shell shape and muscle scar pigmentation in the closely related cupped oysters Crassostrea angulata, C. gigas and their reciprocal hybrids . Aquatic Living Resources , 21, 31-38 . Publisher's official version : https://doi.org/10.1051/alr:2008019 , Open Access version : https://archimer.ifremer.fr/doc/00000/3904/
Sauvage Christopher, Heurtebise Serge, de Koning D., Haley Chris, Boudry Pierre, Lapegue Sylvie (2008). Mapping QTL for resistance to summer mortality in the Pacific oyster Crassostrea gigas . XIV Plant and Animal Genome Conference . https://archimer.ifremer.fr/doc/00000/3504/
Lallias Delphine, Beaumont Andy, Haley Chris, Heurtebise Serge, Boudry Pierre, Lapegue Sylvie (2008). QTL mapping for resistance to bonamiosis in the European flat oyster Ostrea edulis . Plant & Animal Genome Conference. 2008, January 12-18, San Diego, California, USA .
Tanguy Arnaud, Bierne Nicolas, Saavadra Carlos, Pina Benjamin, Bachere Evelyne, Kufe Michael, Bazin Eric, Bonhomme Francois, Boudry Pierre, Boulo Viviane, Boutet Isabelle, Cancela Leonor, Dossat Carole, Favrel Pascal, Huvet Arnaud, Jarque Sergio, Jollivet Didier, Klages Sven, Lapegue Sylvie, Leite Ricardo, Moal Jeanne, Moraga Dario, Reinhardt Richard, Samain Jean-Francois, Zouros Eleftherios, Canario Adelino (2008). Increasing genomic information in bivalves through new EST collections in four species: development of new genetic markers for environmental studies and genome evolution . Gene , 408(1-2), 27-36 . https://doi.org/10.1016/j.gene.2007.10.021

2007

Delaporte Maryse, Soudant P, Lambert C, Jegaden M, Moal Jeanne, Pouvreau Stephane, Degremont Lionel, Boudry Pierre, Samain Jean-Francois (2007). Characterisation of physiological and immunological differences between Pacific oysters (Crassostrea gigas) genetically selected for high or low survival to summer mortalities and fed different rations under controlled conditions . Journal of Experimental Marine Biology and Ecology , 353(1), 45-57 . Publisher's official version : https://doi.org/10.1016/j.jembe.2007.09.003 , Open Access version : https://archimer.ifremer.fr/doc/00000/3578/
Sauvage Christopher, Bierne N, Lapegue Sylvie, Boudry Pierre (2007). Single Nucleotide polymorphisms and their relationship to codon usage bias in the Pacific oyster Crassostrea gigas . Gene , 406(1-2), 13-22 . Publisher's official version : https://doi.org/10.1016/j.gene.2007.05.011 , Open Access version : https://archimer.ifremer.fr/doc/00000/3417/
de Decker Sophie, Normand Julien, Duperthuy Marylise, Boudry Pierre, Saulnier Denis (2007). Modulations of the interactions between pacific cupped oyster Crassostrea gigas and Vibrio according to bacterial virulence and to genetic and physiological status of the host : Methodology and first results . Vibrio 2007 Meeting, Pasteur Institute . https://archimer.ifremer.fr/doc/00000/3430/
Boudry Pierre (2007). "First class oysters" : progress and constgraints in genetic improvement of the Pacific oyster (Crassostrea gigas) . First International Shellfish Conference. 15-16 November 2007, Vlissigen, Netherlands .
McCombie Helen, Cornette Florence, Beaumont Andy, Boudry Pierre (2007). Oocyte activation in Mytilus edulis by Crassostrea gigas spermatozoa . 10th International Conference of Shellfish Restoration (ICSR) 2007 . https://archimer.ifremer.fr/doc/00000/3460/
Lallias Delphine, Boudry Pierre, Lapegue Sylvie, Haley Chris, Heurtebise Serge, Beaumont Andy (2007). A first linkage map for the European flat oyster, Ostrea edulis towards the identification of Bonamia resistance QTLs . ICSR 2007 - 10th International Conference of Shellfish Restoration. November 12-16, 2007, Vlissingen, The Netherlands.
Normand Julien, Huvet Arnaud, Fabioux Caroline, Raguenes Morgane, Boudry Pierre (2007). Physiological and molecular basis of gametogenesis in triploid Pacific oysters, Crassostrea gigas . Actes International Conference on Shellifsh Restoration, Vlissingent, Netherlands, 12-16 Novembre 2007, 18 p. https://archimer.ifremer.fr/doc/00000/3327/
Taris Nicolas, Batista F, Boudry Pierre (2007). Evidence of response to unintentional selection for faster development and inbreeding depression in Crassostrea gigas larvae . Aquaculture , 272(S1), S69-S79 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2007.08.010 , Open Access version : https://archimer.ifremer.fr/doc/00000/3848/
David Elise, Boudry Pierre, Degremont Lionel, Tanguy Amelie, Quere N, Samain Jean-Francois, Moraga D (2007). Genetic polymorphism of glutamine synthetase and delta-9 desaturase in families of Pacific oyster Crassostrea gigas and susceptibility to summer mortality . Journal of Experimental Marine Biology and Ecology , 349(2), 272-283 . Publisher's official version : https://doi.org/10.1016/j.jembe.2007.05.016 , Open Access version : https://archimer.ifremer.fr/doc/00000/3040/
Wenne Roman, Boudry Pierre, Hemmer-Hansen Jakob, Lubieniecki Krzysztof P., Was Anna, Kause Antti (2007). What role for genomics in fisheries management and aquaculture? Aquatic Living Resources , 20(3), 241-255 . Publisher's official version : https://doi.org/10.1051/alr:2007037 , Open Access version : https://archimer.ifremer.fr/doc/00000/2927/
Lambert Christophe, Soudant Phillippe, Degremont Lionel, Delaporte Maryse, Moal Jeanne, Boudry Pierre, Jean Frédéric, Huvet Arnaud, Samain Jean-Francois (2007). Hemocyte characteristics in families of oysters, Crassostrea gigas, selected for differential survival during summer and reared in three sites . Aquaculture , 270(1-4), 276-288 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2007.03.016 , Open Access version : https://archimer.ifremer.fr/doc/00000/3054/
Lallias Delphine, Lapegue Sylvie, Hecquet Celine, Boudry Pierre, Beaumont A (2007). AFLP-based genetic linkage maps of the blue mussel (Mytilus edulis) . Animal Genetics , 38(4), 340-349 . Publisher's official version : https://doi.org/10.1111/j.1365-2052.2007.01611.x , Open Access version : https://archimer.ifremer.fr/doc/00000/2830/
Samain Jean-Francois, Degremont Lionel, Soletchnik Patrick, Haure Joel, Bedier Edouard, Ropert Michel, Moal Jeanne, Huvet Arnaud, Bacca Helene, Van Wormhoudt A, Delaporte Maryse, Costil K, Pouvreau Stephane, Lambert Christian, Boulo Viviane, Soudant Philippe, Nicolas Jean-Louis, Leroux Frederique, Renault Tristan, Gagnaire Beatrice, Geret Florence, Boutet Isabelle, Burgeot Thierry, Boudry Pierre (2007). Genetically based resistance to summer mortality in the Pacific oyster (Crassostrea gigas) and its relationship with physiological, immunological characteristics and infection processes . Aquaculture , 268(1-4), 227-243 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2007.04.044 , Open Access version : https://archimer.ifremer.fr/doc/00000/2809/
Lallias Delphine, Beaumont A.R., Haley C.S., Boudry Pierre, Heurtebise Serge, Lapegue Sylvie (2007). A first generation genetic linkage map of the European flat oyster Ostrea edulis (L.) based on AFLP and microsatellite markers . Animal Genetics , 38(6), 560-568 . Publisher's official version : https://doi.org/10.1111/j.1365-2052.2007.01647.x , Open Access version : https://archimer.ifremer.fr/doc/00000/2642/
Bierne Nicolas, Tanguy A, Faure Michel, Faure B, David E, Boutet I, Boon E, Quere N, Plouviez S, Kemppainen P, Jollivet D, Moraga D, Boudry Pierre, David P (2007). Mark-recapture cloning: a straightforward and cost-effective cloning method for population genetics of single-copy nuclear DNA sequences in diploids . Molecular Ecology Notes , 7(4), 562-566 . Publisher's official version : https://doi.org/10.1111/j.1471-8286.2007.01685.x , Open Access version : https://archimer.ifremer.fr/doc/00000/4222/
Quillet Edwige, Boudry Pierre, Lapegue Sylvie (2007). Variabilité génétique de la réponse aux organismes pathogènes : un outil pour améliorer la santé des mollusques et poissons d'élevage . INRA Productions Animales , 20(3), 239-252 . Open Access version : https://archimer.ifremer.fr/doc/00000/2979/
Leitao A, Chaves R, Santos S, Guedes Pinto H, Boudry Pierre (2007). Interspecific hybridization in oysters: Restriction enzyme digestion chromosome banding confirms Crassostrea angulata x Crassostrea gigas F1 hybrids . Journal of Experimental Marine Biology and Ecology , 343(2), 253-260 . Publisher's official version : https://doi.org/10.1016/j.jembe.2006.12.007 , Open Access version : https://archimer.ifremer.fr/doc/00000/4959/
Boudry Pierre, Huvet Arnaud, Lapegue Sylvie, Sauvage Christopher, Tanguy A., Moraga D., Goostrey A., Prunet P., Boulo Viviane, Gueguen Y., Moal Jeanne, Fleury Elodie, Samain Jean-Francois, Mathieu M., Favrel P. (2007). Recent advances in EST sequencing in Crassostrea gigas: towards the sequencing of the Pacific oyster genome . Marine Genonics Europe Exploratory Workshop . https://archimer.ifremer.fr/doc/00000/3414/
Lallias Delphine, Hecquet Céline, Boudry Pierre, Lapegue Sylvie, Beaumont Andy (2007). A first genetic linkage map of the blue mussel Mytilus edulis . International Triennial Meeting Aquaculture 2007 . https://archimer.ifremer.fr/doc/00000/3465/
Lallias Delphine, Lapegue Sylvie, Haley Chris, Heurtebise Serge, Boudry Pierre, Beaumont Andy (2007). A first genetic linkage map of the European flat oyster, Ostrea edulis : towards the identification of Bonamia resistance QTLs . IMBC 2007 - 8th International Marine Biotechnology Conference. 11-16 March 2007 , Eilat, Israel .
Degremont Lionel, Ernande Bruno, Bedier Edouard, Boudry Pierre (2007). Summer mortality of hatchery-produced Pacific oyster spat (Crassostrea gigas). I. Estimation of genetic parameters for survival and growth . Aquaculture , 262(1), 41-53 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2006.10.025 , Open Access version : https://archimer.ifremer.fr/doc/00000/2457/
(2007) Rapport de synthèse des travaux 2007 du projet Gerrico . https://archimer.ifremer.fr/doc/00304/41515/
Batista Frederico, Leitao Alexandra, Fonseca Vera, Ben-Hamadou Radhouan, Ruano Francisco, Henriques Maria, Guedes-Pinto Henrique, Boudry Pierre (2007). Individual relationship between aneuploidy of gill cells and growth rate in the cupped oysters Crassostrea angulata, C. gigas and their reciprocal hybrids . Journal of Experimental Marine Biology and Ecology , 352, 226-233 . https://doi.org/10.1016/j.jembe.2007.07.009
Batista Frederico, Arzul Isabelle, Pepin Jean-Francois, Ruano Francisco, Friedman Carolyn S., Boudry Pierre, Renault Tristan (2007). Detection of ostreid herpesvirus 1 DNA by PCR in bivalve molluscs: A critical review . Journal of Virological Methods , 139(1), 1-11 . Publisher's official version : https://doi.org/10.1016/j.jviromet.2006.09.005 , Open Access version : https://archimer.ifremer.fr/doc/00000/2322/

2006

Samain Jean-Francois, Degremont Lionel, Soletchnik Patrick, Ropert Michel, Bedier Edouard, Mazurie Joseph, Martin Jean-Louis, Moal Jeanne, Mathieu Michel, Pouvreau Stephane, Lambert Christophe, Escoubas Jean-Michel, Nicolas Jean-Louis, Le Roux Frédérique, Renault Tristan, Burgeot Thierry, Bacher Cedric, Boudry Pierre (2006). Nutrition and reproduction are key parameters in the interaction process leading to Crassostrea gigas oyster summer mortality in France . International Workshop on Reproduction and Nutrition of Mollusks. November 6–9, 2006, La Paz, Mexico .
Boudry Pierre, Degremont Lionel, Bedier Edouard, Pouvreau Stephane, Normand Julien, Ernande Bruno (2006). Genetic variation and trade-offs for reproduction and survival in the Pacific oyster Crassostrea gigas . 1st International Workshop "Physiological aspects of reproduction and nutrition in Mollusks". November 6-9 2006 , La Paz, Mexico .
Boudry Pierre, Bedier Edouard, Ernande Bruno, Degremont Lionel (2006). Response to divergent selection for resistance to summer mortality in Pacific oyster spat : genetic parameters and correlated responses with subsequent survival and growth . International Workshop on Summer Mortality of Marine Shellfish. October 11-14 2006, Busan, South Korea .
Boudry Pierre, Haffray Pierrick (2006). Research and development for the genetic improvement of the Pacific oyster in France : present and prospects . International Workshop on Summer Mortality of Marine Shellfish. October 11-14 2006, Busan, South Korea .
Taris Nicolas, Sauvage Christopher, Batista Frederico, Baron Sophie, Ernande Bruno, Haffray Pierrick, Boudry Pierre (2006). Conséquences génétiques de la production de larves d'huîtres en écloserie : étude des processus de dérive et de sélection . Actes du 6e colloque national BRG, La Rochelle, 2-3-4 octobre 2006 . https://archimer.ifremer.fr/doc/00000/1505/
Lapegue Sylvie, Ben Salah Inès, Batista Frederico, Heurtebise Serge, Neifar Lassad, Boudry Pierre (2006). Taxonomie de l'huître naine Ostreola stentina . 6ème Colloque BRG (Bureau Ressources Génétique) . https://archimer.ifremer.fr/doc/00000/3364/
Brizard Raphael, Boudry Pierre, Haffray Patrick, Labbe C., Suquet Marc, Robert Rene, Masse G., Pepin Jean-Francois, Saulnier Denis (2006). Mise au point d'outils de gestion des gamètes mâles d'huîtres creuses Crassostrea gigas diploïdes et tétraploïdes à des fins de conservation et de diffusion . 6ème Colloque BRG (Bureau Ressources Génétique) . https://archimer.ifremer.fr/doc/00000/3339/
Tanguy Arnaud, Boutet Isabelle, Boudry Pierre, Degremont Lionel, Laroche Jean, Moraga Dario (2006). Molecular identification and expression of the phosphoglucomutase (PGM) gene from the Pacific oyster Crassostrea gigas . Gene , 382, 20-27 . Publisher's official version : https://doi.org/10.1016/j.gene.2006.06.005 , Open Access version : https://archimer.ifremer.fr/doc/00000/2220/
Lapegue Sylvie, Ben Salah Ines, Batista Frederico, Heurtebise Serge, Neifar L, Boudry Pierre (2006). Phylogeographic study of the dwarf oyster, Ostreola stentina, from Morocco, Portugal and Tunisia: evidence of a geographic disjunction with the closely related taxa, Ostrea aupouria and Ostreola equestris . Marine Biology , 150(1), 103-110 . Publisher's official version : https://doi.org/10.1007/s00227-006-0333-1 , Open Access version : https://archimer.ifremer.fr/doc/00000/1912/
Prudence Marie, Moal Jeanne, Boudry Pierre, Daniel Jean-Yves, Quere Claudie, Jeffroy Fanny, Mingant Christian, Ropert Michel, Bedier Edouard, Van Wormhoudt A, Samain Jean-Francois, Huvet Arnaud (2006). An amylase gene polymorphism is associated with growth differences in the Pacific cupped oyster Crassostrea gigas . Animal Genetics , 37(4), 348-351 . Publisher's official version : https://doi.org/10.1111/j.1365-2052.2006.01481.x , Open Access version : https://archimer.ifremer.fr/doc/00000/1691/
Lallias Delphine, Lapegue Sylvie, Harley Crhis, Boudry Pierre, Heurtebise Serge, Beaumont Andy (2006). A preliminary genetic linkage map for the European flat oyster Ostrea edulis L. International symposium Genetics in Aquaculture . https://archimer.ifremer.fr/doc/00000/3466/
Batista Frederico, Fonseca Vera, Ben-Hamadou Radhouan, Taris Nicolas, Henriques Maria, Boudry Pierre (2006). Hybridization and morphological differences between the two closely related oyster taxa Crassostrea angulata and C. gigas . International Association for Genetics in Aquaculture (IAGA) . https://archimer.ifremer.fr/doc/00000/3429/
Taris Nicolas, Sauvage Christopher, Ernande Bruno, Batista Frederico, Boudry Pierre (2006). Effects of genetic drift and selection at larval stage resulting from hatchery practices in the Pacific oyster (Crassostrea gigas) . IAGA - International Association for Genetics in Aquaculture. 26-30 Juin 2006, Montpellier .
Sauvage Christopher, Lapegue Sylvie, Bierne Nicolas, Boudry Pierre (2006). Development of SNPs and their use for the identification of summer mortality resistance QTLs in the Pacific oyster (Crassotrea gigas) . International Association for Genetics in Aquaculture (IAGA) . https://archimer.ifremer.fr/doc/00000/3351/
Lapegue Sylvie, Beaumont A., Boudry Pierre, Goulletquer Philippe (2006). European flat oyster - Ostrea edulis . Actes Workshop Genetics of domestication, breeding and enhancement of performance of fish and shellfish, Viterbo, Italy, 12-17 june 2006, pp.68-73 . https://archimer.ifremer.fr/doc/00000/3321/
Lapegue Sylvie, Boudry Pierre, Goulletquer Philippe (2006). Pacific cupped oyster - Crassostrea gigas . Actes Workshop Genetics of domestication, breeding and enhancement of performance of fish and shellfish, Viterbo, Italy, 12-17 june 2006, pp.74-80 . https://archimer.ifremer.fr/doc/00000/3322/
Lallias Delphine, Lapegue Sylvie, Halley Chris, Boudry Pierre, Beaumont Andy (2006). A preliminary genetic linkage map for the European flat oyster Ostrea edulis . Aqua 2006 - World Aquaculture Society Conference. May 10-13 2006, Florence, Italy .
Samain Jean-Francois, Ropert Michel, Bedier Edouard, Soletchnik Patrick, Mazurie Joseph, Le Coz Florence, Blin Jean-Louis, Mille Dominique, Pajot Régis, Haffray Patrick, Bacher Cedric, Grangere Karine, Pouvreau Stephane, Bourles Yves, Gohin Francis, Woerther Patrice, Boudry Pierre (2006). Possibilities to prevent Crassostrea gigas oyster summer mortality in France . AQUA 2006 - World Aquaculture Society, Aquaculture 2006 .
Lapegue Sylvie, Boudry Pierre (2006). Oyster population genetics: Tracing introductions and understanding natural populations . Aqua 2006 - World Aquaculture Society Conference. May 10-13 2006, Florence, Italy .
Taris Nicolas, Ernande Bruno, McCombie Helen, Boudry Pierre (2006). Phenotypic and genetic consequences of size selection at the larval stage in the Pacific oyster (Crassostrea gigas) . Journal of Experimental Marine Biology and Ecology , 333(1), 147-158 . Publisher's official version : https://doi.org/10.1016/j.jembe.2005.12.007 , Open Access version : https://archimer.ifremer.fr/doc/00000/1677/
Bierne Nicolas, Bonhomme Francois, Boudry Pierre, Szulkin M, David Pierre (2006). Fitness landscapes support the dominance theory of post-zygotic isolation in the mussels Mytilus edulis and M. galloprovincialis . Proceedings of the Royal society of London (B) (Biological sciences) , 273(1591), 1253-1260 . Publisher's official version : https://doi.org/10.1098/rspb.2005.3440 , Open Access version : https://archimer.ifremer.fr/doc/00000/1350/
Lallias Delphine, Taris Nicolas, Boudry Pierre, Bonhomme Francois, Lapegue Sylvie (2006). Variance of reproductive success in the European flat oyster Ostrea edulis assessed by microsatellite-based parentage analyses in a natural population and in hatchery . 98 Annual Meeting National Shellfisheries Association. 26-30 Mar 2006, Monterey, CA, USA .
Taris Nicolas, Batista Frederico, Marissal Eric, Boudry Pierre (2006). Response to unintentional selection for faster development associated with inbreeding depression in Crassostrea gigas larvae, resulting from a broodstock selective breeding plan . 98 Annual Meeting National Shellfisheries Association. 26-30 Mar 2006, Monterey, CA, USA .
Boudry Pierre (2006). Etude des processus de dérive et de sélection liés aux pratiques d'élevage en écloserie d'huître creuse . RAPPORT FINAL DU PROJET DE RECHERCHE 14-C/2003 . https://archimer.ifremer.fr/doc/00000/1459/
Lallias Delphine, Boudry Pierre, Heurtebise Serge, Lapegue Sylvie, Beaumont Andy (2006). Establishment of a genetic map in the European flat oyster Ostrea edulis L. XIV Plant and Animal Genome Conference . https://archimer.ifremer.fr/doc/00000/3472/
Boudry Pierre (2006). Défi MOREST - Mortalités estivales de l'huître creuse Crassostrea gigas - Caracterisation des facteurs de risques associés au mortalités estivales - Synthèse du thème IVA - Etude des bases génétiques de la mortalité estivale du naissain et des possibilités d'amélioration de la survie par sélection. (La Rochelle 14- 15 mars 2006) . https://archimer.ifremer.fr/doc/00304/41534/
Bierne Nicolas, Boudry Pierre, Lapegue Sylvie, Bonhomme Francois, Faure M, Sauvage Christopher, Moraga D, Boutet Isabelle, David Elise, Jollivet Didier, Tanguy Arnaud, Faure Baptiste, David Patrice (2006). "Bivalvomix" : génomique évolutive des bivalves marins . "BIVALVOMIX" 2006 . https://archimer.ifremer.fr/doc/00000/6489/

2005

Benabdelmouna Abdellah, Cornette Florence, Grouhel S, Lapegue Sylvie, Boudry Pierre, Goulletquer Philippe (2005). Suivi du niveau de ploïdie huîtres dans les deux bassins de captage de Marennes-Oléron et Arcachon . R.INT.DRV/LABORATOIRE DE GÉNÉTIQUE ET PATHOLOGIE DE LA TREMBLADE 2005 .
Normand Julien, Boudry Pierre, Cornette Florence, Ledu Christophe (2005). Study of the reproductive potential of triploid oysters . 8th International Conference on Shellfish Restoration . https://archimer.ifremer.fr/doc/00000/3319/
Huvet Arnaud, Samain Jean-Francois, Boudry Pierre, Bedier Edouard, Ropert Michel, Van Wormhoudt A. (2005). Amylase polymorphism affects growth in the cupped oyster Crassostrea gigas . Actes International Coneference on Shellifsh Restoration, Brest, France 2-5 Octobre 2005, 12 p. https://archimer.ifremer.fr/doc/00000/3311/
Batista Frederico, Boudry Pierre, Lapegue Sylvie, Heurtebise Serge, Monteiro C. C. (2005). Is the Portuguese oyster Crassostrea angulata in Southern Europe endangered by the expansion of the Pacific oyster C. gigas? Actes International Coneference on Shellifsh Restoration, Brest, France 2-5 Octobre 2005, 14 p. https://archimer.ifremer.fr/doc/00000/3310/
Taris Nicolas, Sauvage Christopher, Ernande Bruno, Boudry Pierre (2005). Genetic effect of domestication selective pressures on Pacific oyster at larval stage . Larvi 2005 - 4th Fish & Shellfish Larviculture Symposium. September 5-8, Gent, Belgium .
Degremont Lionel, Bedier Edouard, Soletchnik Patrick, Ropert Michel, Huvet Arnaud, Moal Jeanne, Samain Jean-Francois, Boudry Pierre (2005). Relative importance of family, site, and field placement timing on survival, growth, and yield of hatchery-produced Pacific oyster spat (Crassostrea gigas) . Aquaculture , 249(1-4), 213-229 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2005.03.046 , Open Access version : https://archimer.ifremer.fr/doc/00000/1693/
McCombie Helen, Ledu Christophe, Phelipot Pascal, Lapegue Sylvie, Boudry Pierre, Gerard Andre (2005). A complementary method for production of tetraploid Crassostrea gigas using crosses between diploids and tetraploids with cytochalasin B treatments . Marine Biotechnology , 7(4), 318-330 . Publisher's official version : https://doi.org/10.1007/s10126-004-0440-2 , Open Access version : https://archimer.ifremer.fr/doc/00000/632/
Batista Frederico, Leitao Alexandra, Huvet Arnaud, Lapegue Sylvie, Heurtebise Serge, Boudry Pierre (2005). The taxonomic status and origin of the Portuguese oyster Crassostea angulata (Lamark, 1819) . 1st International Oyster Symposium, Tokyo, Japan, July 13-14 . https://archimer.ifremer.fr/doc/00000/3433/
Degremont Lionel, Boudry Pierre, Soletchnik Patrick, Bedier Edouard, Ropert Michel, Samain Jean-Francois (2005). Effects of age and environment on the summer mortality in cupped oyster Crassostrea gigas during the first two years . 97. Annual Meeting of the National Shellfisheries Association (Pacific Coast Section) & Pacific Coast Growers Association, of the National Shellfisheries Association. 10-14 April 2005, Philadelphia, Pennsylvania, USA .
Huvet Arnaud, Degremont Lionel, Labreuche Yannick, Daniel Jean-Yves, Dubrunfaut Thomas, Boudry Pierre, Haure Joel, Bedier Edouard, Ropert Michel, Herpin Amaury, Cunningham Charles, Moal Jeanne, Samain Jean-Francois (2005). The identification of genes from the oyster Crassostrea gigas that are differentially expressed between progeny exhibiting opposed susceptibility to summer mortality . IMBC 2005 - International Marine Biotechnology Conference. 2005 June 6-12, St John's, Newfoundland & Labrador, Canada .
Boudry Pierre (2005). Genetic improvement of hatchery propagated bivalve stocks : prospects and constraints . IMBC 2005 - International Marine Biotechnology Conference. 2005 June 6-12, St John's, Newfoundland & Labrador, Canada .
Taris Nicolas, Sauvage Christopher, Boudry Pierre (2005). Impact of intensive larval rearing practices in oyster hatcheries : selective processes and loss of genetic variability (Poster) . IMBC 2005 CIBM International Marine Biotechnology Conference - Conférence Internationale en Biotechnologie Marine . https://archimer.ifremer.fr/doc/00000/3444/
McCombie Helen, Lapegue Sylvie, Cornette Florence, Ledu Christophe, Boudry Pierre (2005). Chromosome loss in bi-parental progenies of tetraploid Pacific oyster Crassostrea gigas . Aquaculture , 247(1-4), 97-105 . Publisher's official version : https://doi.org/10.1016/j.aquaculture.2005.02.003 , Open Access version : https://archimer.ifremer.fr/doc/00000/633/
Degremont Lionel, Boudry Pierre, Soletchnik Patrick, Bedier Edouard, Ropert Michel, Samain Jean-Francois (2005). Effect of age and environment on the summer mortality in cupped oyster Crassostrea gigas during the first two years . 97. Annual Meeting of the National Shellfisheries Association (Pacific Coast Section) & Pacific Coast Growers Association. 10-14 April 2005, Philadelphia, Pennsylvania, USA .
Taris Nicolas, Sauvage Christopher, Ernande Bruno, Boudry Pierre (2005). Microsatellite-based parentage analysis of factorial crosses in Pacific oyster (Crassostrea gigas) larvae and spat . 97. Annual Meeting of the National Shellfisheries Association (Pacific Coast Section) & Pacific Coast Growers Association, of the National Shellfisheries Association. 10-14 April 2005, Philadelphia, Pennsylvania, USA .
Batista Frederico, Taris Nicolas, Boudry Pierre, Renault Tristan (2005). Detection of ostreid herpesvirus-1 (OsHV-1) by PCR using a rapid and simple method of DNA extraction from oyster larvae . Diseases of aquatic organisms , 64(1), 1-4 . Open Access version : https://archimer.ifremer.fr/doc/00000/2916/
Taris Nicolas, Baron S, Sharbel Tim, Sauvage Christopher, Boudry Pierre (2005). A combined microsatellite multiplexing and boiling DNA extraction method for high-throughput parentage analyses in the Pacific oyster (Crassostrea gigas) . Aquaculture Research , 36(5), 516-518 . Publisher's official version : https://doi.org/10.1111/j.1365-2109.2004.01208.x , Open Access version : https://archimer.ifremer.fr/doc/00000/1814/
Bouilly Karine, Leitao Alexandra, Chaves Raquel, Guedes Pinto Henrique, Boudry Pierre, Lapegue Sylvie (2005). Endonuclease banding reveals that atrazine-induced aneuploidy resembles spontaneous chromosome loss in Crassostrea gigas . Genome , 48(1), 177-180 . Publisher's official version : https://doi.org/10.1139/G04-087 , Open Access version : https://archimer.ifremer.fr/doc/00000/654/
Barbosa Solomieu Valérie, Degremont Lionel, Vazquez Juarez R., Ascencio Valle F., Boudry Pierre, Renault Tristan (2005). Ostreid Herpesvirus 1 (OsHV-1) detection among three successive generations of Pacific oysters (Crassostrea gigas) . Virus Research , 107(1), 47-56 . https://doi.org/10.1016/j.virusres.2004.06.012
Arnaud-Haond Sophie, Goyard Emmanuel, Prou Jean, Vonau Vincent, Bonhomme Francois, Boudry Pierre (2005). Gestion des ressources génétiques de l'huître perlière Pinctada margaritifera de Polynésie française : caractérisation génétique des populations et optimisation du recrutement pour l'exploitation perlière . Les Actes du BRG , 5, 215-229 . Open Access version : https://archimer.ifremer.fr/doc/00000/3822/

2004

Lapegue Sylvie, Heurtebise Serge, Cornette Florence, Brizard Raphael, Sharbel Tim, Boudry Pierre (2004). Impact de la dissémination accidentelle d'huîtres tétraploïdes : potentiel de dispersion et succès reproducteur . https://archimer.ifremer.fr/doc/00043/15460/
Lapegue Sylvie, Batista Frederico, Heurtebise Serge, Yu Ziniu, Boudry Pierre (2004). Evidence for the presence of the Portuguese oyster, Crassostrea angulata, in northern China . Journal of Shellfish Research , 23(3), 759-763 . Open Access version : https://archimer.ifremer.fr/doc/00000/3173/
Diaz Almela F, Boudry Pierre, Launey Sophie, Bonhomme Francois, Lapegue Sylvie (2004). Reduced female gene flow in the European flat oyster Ostrea edulis . Journal of Heredity , 95(6), 510-516 . Publisher's official version : https://doi.org/10.1093/jhered/esh073 , Open Access version : https://archimer.ifremer.fr/doc/00000/680/
Cornette Florence, Grouhel Stephanie, Sharbel Tim, Boudry Pierre, Goulletquer Philippe, Lapegue Sylvie (2004). Niveau de ploïdie des huîtres des bassins de captage de Marennes-Oléron et Arcachon . R.INT.DRV/RA/LGP . https://archimer.ifremer.fr/doc/00043/15445/
Boudry Pierre, Saavedra Carlos (2004). Overwiew on molecular tools in bivalve shellfish aquaculture . IVth EFARO Workshop Genetics tools for fisheries and aquaculture development. 28-31 October 2004, Lisbon, Portugal .
Boudry Pierre (2004). Overwiew on selective breeding and genetic improvement in bivalve shellfish . IVth EFARO Workshop Genetics tools for fisheries and aquaculture development. 28-31 October 2004, Lisbon, Portugal .
Taris Nicolas, Sauvage Christopher, Boudry Pierre (2004). Genetic impact of intensive rearing practices in oyster hatcheries: selective processes and loss of genetic variability . Workshop Franco-Américain "Domestication of Bivalve Mollusks". 11-13 October 2004 , , Tacoma, Washington State, USA .
Brizard Raphael, Bernardi Maud, Boudry Pierre, Haffray Pierrick, Labbe Catherine, Maisse Gérard, Maurouard Elise, Robert Rene, Roger Jean-Luc (2004). Projet CRYOYSTER: Optimisation, standardisation et validation de la congélation de laitance d'huître creuse Crassostrea gigas à des fins de conservation et de diffusion génétique - Appel d'offre de l'OFIMER du 8 Novembre 2001 - Rapport final . Convention OFIMER n°009/03/C - Convention de partenariat Ifremer/INRA/SYSAAF n° 03:5 210 093 . https://archimer.ifremer.fr/doc/00049/16056/
Leitao Alexandra, Chaves R., Santos S., Guedes Pinto H., Boudry Pierre (2004). Restriction enzyme digestion chromosome banding in Crassostrea and Ostrea species: comparative karyological analysis within Ostreidae . Mammalian Genome , 47(5), 781-788 . https://doi.org/10.1139/G04-035
Lopez Flores Inmaculada, de La Herran R, Garrido Ramos M, Boudry Pierre, Ruiz Rejon C, Ruiz Rejon M (2004). The molecular phylogeny of oysters based on a satellite DNA related to transposons . Gene , 339, 181-188 . Publisher's official version : https://doi.org/10.1016/j.gene.2004.06.049 , Open Access version : https://archimer.ifremer.fr/doc/00000/761/
Taris Nicolas, Sauvage Christopher, Boudry Pierre (2004). Impact génétique de la production intensive d'huîtres en écloserie : processus de dérive et de sélection liés aux pratiques d'élevage larvaire . XXIIème Réunion annuelle du Groupe de Biologie et Génétique des Populations. 24-27 août 2004, Paris .
Arnaud-Haond Sophie, Vonau Vincent, Bonhomme Francois, Boudry Pierre, Blanc F., Prou Jean, Seaman Terii, Goyard Emmanuel (2004). Spatio-temporal variation in the genetic composition of wild populations of pearl oyster (Pinctada margaritifera cumingii) in French Polynesia following 10 years of juvenile translocation . Molecular Ecology , 13(7), 2001-2007 . https://doi.org/10.1111/j.1365-294X.2004.02188.x
Bouilly Karine, Leitao Alexandra, McCombie Helen, Chaves R., Guedes Pinto H, Boudry Pierre, Lapegue Sylvie (2004). Impact of atrazine on somatic aneuploidy in cupped oysters, Crassostrea gigas . Second B Chromosome Conference . https://archimer.ifremer.fr/doc/00000/3489/
Boudry Pierre, Degremont Lionel, Taris Nicolas, McCombie Helen, Haffray Pierrick, Ernande Bruno (2004). Genetic variability and selective breeding for traits of aquacultural interest in the Pacific oyster (Crassostrea gigas) . Aquaculture Biotechnology Workshop. 2004 May 11-12, St Andrews, New Brunswick, Canada .
Boudry Pierre, Degremont Lionel, Bedier Edouard, Samain Jean-Francois (2004). Selective breeding to improve resistance against summer mortality in the Pacific oyster Crassostrea gigas : results after 3 generations . International triennial Meeting "Aquaculture 2004". Honolulu, Hawaii, USA .
Lopez-Flores I., de La Herran R., Garrido-Ramos M. A., Boudry Pierre, Ruiz-Rejon C., Ruiz-Rejon M. (2004). Using a satellite DNA family for species identification of commercial oysters . International Triennial Meeting Aquaculture 2004 . https://archimer.ifremer.fr/doc/00000/3484/
Ernande Bruno, Boudry Pierre, Clobert J., Haure Joel (2004). Plasticity in resource allocation based life history traits in the Pacific oyster, Crassostrea gigas. I. Spatial variation in food abundance . Journal of Evolutionary Biology , 17(2), 342-356 . https://doi.org/10.1046/j.1420-9101.2003.00674.x
Lapegue Sylvie, Taris Nicolas, Lallias Delphine, Bonhomme Francois, Boudry Pierre (2004). Genetic Impact Of The Reproduction Dynamics In The European Flat Oyster Ostrea edulis . 96th Annual Meeting of the National Shell Fisheries Association. March 1-5, 2004, Honolulu, Hawaii, USA.
Lapegue Sylvie, Taris Nicolas, Lallias Delphine, Bonhomme Francois, Boudry Pierre (2004). Genetic impact of the reproduction dynamics in the European flat oyster Ostrea edulis . International triennial Meeting "Aquaculture 2004". Honolulu, Hawaii, USA .
Boudry Pierre, Degremont Lionel, Taris Nicolas, McCombie Helen, Haffray Pierrick, Ernande Bruno (2004). Genetic variability and selective breeding for traits of aquacultural interest in the Pacific oyster (Crassostrea gigas) . Bulletin of the Aquaculture Association of Canada , 104(2), 12-18 . Open Access version : https://archimer.ifremer.fr/doc/00000/2861/
Huvet Arnaud, Fabioux Caroline, McCombie Helen, Lapegue Sylvie, Boudry Pierre (2004). Natural hybridization between genetically differentiated populations of Crassostrea gigas and C-angulata highlighted by sequence variation in flanking regions of a microsatellite locus . Marine Ecology Progress Series , 272, 141-152 . Open Access version : https://archimer.ifremer.fr/doc/00000/3355/
Haffray Pierric, Boudry Pierre, Lapegue Sylvie (2004). Morest 2004. Sortie de crise génétique. Projet collectif de sélection de l'huître creuse Crassostrea gigas .
Degremont Lionel, Fortin Adeline, Boudry Pierre (2004). Base génétique des mortalités estivales: caractérisation sur estran et en laboratoire de familles en troisième génération . Contrat Region Poitou-Charentes 2000-2006. Convention 2003- RPG-A.114 "Genetique". Programme 3 : Gestion durable des productions ostreicoles : les apports de la genetique .
Lapegue Sylvie, Bedier Edouard, Goyard Emmanuel, Degremont Lionel, Baud Jean-Pierre, Gerard Andre, Goulletquer Philippe, Boudry Pierre (2004). Apport d'un programme de génétique à une filière de production aquacole : l'exemple de l'ostréiculture . Styli 2003. Trente ans de crevetticulture en Nouvelle-Calédonie. Nouméa - Koné, 2-6 juin 2003. 2004. Gorarant C, Harache Y, Herbland A, Mugnier C. Ed. Ifremer, Actes de Colloque, n°38, pp.113-120 . https://archimer.ifremer.fr/doc/00000/3491/

2003

Boudry Pierre (2003). Diversité génétique chez les huîtres creuses du genre Crassostrea : quelles ressources pour quelle amélioration des productions de C; gigas? HDR. https://archimer.ifremer.fr/doc/00000/3354/
Goyard Emmanuel, Arnaud-Haond Sophie, Vonau Vincent, Bishoff Vincent, Mouchel Olivier, Pham Dominique, Wyban Jim, Boudry Pierre (2003). Residual genetic variability in domesticated populations of the Pacific blue shrimp (Litopenaeus stylirostris) of New Caledonia, French Polynesia and Hawaii and some management recommendations . Aquatic Living Resources , 16(6), 501-508 . Publisher's official version : https://doi.org/10.1016/j.aquliv.2003.07.001 , Open Access version : https://archimer.ifremer.fr/doc/00000/596/
Boudry Pierre, Heurtebise Serge, Lapegue Sylvie (2003). Mitochondrial and nuclear DNA sequence variation of presumed Crassostrea gigas and Crassostrea angulata specimens: a new oyster species in Hong Kong? Aquaculture , 228(1-4), 15-25 . https://doi.org/10.1016/S0044-8486(03)00443-5
Degremont Lionel, Bedier Edouard, Soletchnik Patrick, Ropert Michel, Samain Jean-Francois, Boudry Pierre (2003). Summer mortality in juvenile cupped oysters : response to selection in the field and in laboratory . Conference Genetics in Aquaculture VIII . https://archimer.ifremer.fr/doc/00000/3439/
McCombie Helen, Lapegue Sylvie, Cornette Florence, Ledu Christophe, Boudry Pierre (2003). Chromosome loss in tetraploid families of the Pacific oyster Crassostrea gigas . Symposium Genetic in Aquaculture VIII. 2003 November 9-15 , Puerto Varas, Chile .
Degremont Lionel, Fortin Adeline, Boudry Pierre (2003). Caractérisation sur estran et en laboratoire des 3 séries produites en troisième génération : G3SD - G3C1 - G3C2 . MOREST 2003 . https://archimer.ifremer.fr/doc/00035/14668/
Boudry Pierre, Collet B, McCombie Helen, Ernande Bruno, Morand B, Heurtebise Serge, Gerard Andre (2003). Individual growth variation and its relationship with survival in juvenile Pacific oysters, Crassostrea gigas (Thunberg) . Aquaculture International , 11(5), 429-448 . Publisher's official version : https://doi.org/10.1023/B:AQUI.0000004189.49517.c0 , Open Access version : https://archimer.ifremer.fr/doc/00000/467/
Tanguy Aurelie, Boutet Isabelle, Riso Ricardo, Boudry Pierre, Auffret Michel, Moraga Dario (2003). Metallothionein genes in the European flat oyster Ostrea edulis: a potential ecological tool for environmental monitoring? Marine Ecology Progress Series , 257, 87-97 . Open Access version : https://archimer.ifremer.fr/doc/00000/2850/
Sellos D., Moal Jeanne, Degremont Lionel, Huvet Arnaud, Daniel Jean-Yves, Nicoulaud S., Boudry Pierre, Samain Jean-Francois, Van Wormhoudt A. (2003). Structure of amylase genes in populations of pacific cupped oyster (Crassostrea gigas): Tissue expression and allelic polymorphism . Marine Biotechnology , 5(4), 360-372 . https://doi.org/10.1007/s10126-002-0089-7
Boudry Pierre, Launey Sophie, Diaz-Almela A., Naciri-Graven Yamama, Ledu Christophe, Mira S., Taris Nicolas, Bonhomme Francois, Lapegue Sylvie (2003). Diversité et différentiation génétique chez l'huître plate européenne : de la population à l'individu (Actes) . III Congrès International des Sociétés Européennes de Malacologie, La Rochelle, 24-27 huin 2003, 101-102 (Richard G. ed.) . https://archimer.ifremer.fr/doc/00000/2851/
Ernande Bruno, Clobert J., McCombie Helen, Boudry Pierre (2003). Genetic polymorphism and trade-offs in the early life-history strategy of the Pacific oyster, Crassostrea gigas (Thunberg, 1795): a quantitative genetic study . Journal of Evolutionary Biology , 16(3), 399-414 .
Moal Jeanne, Bedier Edouard, Fleury Pierre-Gildas, Langlade Aime, Le Coguic Yvette, Degremont Lionel, Boudry Pierre, Le Coz Jean-Rene, Pouvreau Stephane, Enriquez-Diaz M., Lambert Christophe, Quere Christele, Soudant Philippe, Samain Jean-Francois (2003). Genetic and reproduction strategy in Crassostrea gigas mortality . 95. Annual Meeting of the National Shellfisheries Association. 13-17 Apr 2003, New Orleans, LA, USA .
Degremont Lionel, Boudry Pierre, Bedier Edouard, Ropert Michel, Soletchnik Patrick, Huvet Arnaud, Moal Jeanne, Samain Jean-Francois (2003). Genetic basis of summer mortality in juvenile cupped oysters . 95. Annual Meeting of the National Shellfisheries Association. 13-17 Apr 2003, New Orleans, LA, USA .
Arnaud-Haond Sophie, Vonau Vincent, Bonhomme François, Boudry Pierre, Prou Jean, Seaman Terii, Veyret Melanie, Goyard Emmanuel (2003). Spat collection of the pearl oyster (Pinctada margaritifera cumingii) in French Polynesia: an evaluation of the potential impact on genetic variability of wild and farmed populations after 20 years of commercial exploitation . Aquaculture , 219(1-4), 181-192 . https://doi.org/10.1016/S0044-8486(02)00568-9
Degremont Lionel, Boudry Pierre, Bedier Edouard, Ropert Michel, Soletchnik Patrick, Huvet Arnaud, Moal Jeanne, Samain Jean-Francois (2003). Mortalités estivales et croissance du naissain de l'huître creuse Crassostrea gigas : étude de familles sélectionnées . Présentation - Journées Conchylicoles Ifremer, Nantes, 12-13 mars 2003 . https://archimer.ifremer.fr/doc/00000/3490/
Boudry Pierre, Lapegue Sylvie, Guyomard R. (2003). Review and practical use of genome mapping in aquacultured organisms. Position paper by the Working Group on the Application of Genetics in Fisheries and Mariculture (WGAGFM) . Report of the Working Group on the Application of Genetics in Fisheries and Mariculture, La Rochelle, France, Ref. ICES CM 2003/F:01, 21 p. https://archimer.ifremer.fr/doc/00000/3301/
Haure Joel, Huvet Arnaud, Palvadeau Hubert, Nourry Max, Penisson Christian, Martin Jean-Louis, Boudry Pierre (2003). Feeding and respiratory time activities in the cupped oysters Crassostrea gigas, Crassostrea angulata and their hybrids . Aquaculture , 218(1-4), 539-551 . https://doi.org/10.1016/S0044-8486(02)00493-3
Lapegue Sylvie, Taris Nicolas, Boudry Pierre, Langlade Aime, Bonhomme Francois (2003). Diversité génétique et dynamique du recrutement chez l'huître plate Ostrea edulis L. (2003) . LGP/La Tremblade . https://archimer.ifremer.fr/doc/00044/15478/
Lam Katherine, Morton Brian, Boudry Pierre, Heurtebise Serge (2003). Morphological and mitochondrial DNA characteristics of two cultured species of cupped-oysters (Bivalvia : Ostreidae) in Hong Kong : towards a significant taxonomic name change . Proceedings of an Internation Workshop, Reunion conference, Hong Kong 21626 October 2001 . https://archimer.ifremer.fr/doc/00000/2844/
Arnaud Sophie, Prou Jean, Boudry Pierre, Vonau Vincent, Goyard Emmanuel (2003). Ressources génétiques de l'huître perlière de Polynésie Française, Pinctada margaritifera. Recherche de populations locales origninales et aide à la définition d'une stratégie de conservation . Rapport final. Contrat de développement Etat-Territoire 2000-2003 .
Samain Jean-Francois, Boudry Pierre, Degremont Lionel, Soletchnik Patrick, Pouvreau Stephane, Ropert Michel, Bedier Edouard, Thouard Emmanuel, Martin J.L., Haure Joel, Moal J., Huvet Arnaud, Van Wormhoudt A., Boulo Viviane, Mathieu M., Costil K., Kellner K., Heude C., Lambert Christophe, Soudant Philippe, Nicolas Jean-Louis, Le Roux F., Renault Tristan, Thomas H., Burgeot Thierry, Quiniou Francoise, Knoery Joel, Lelong C., Moraga Dario, Tanguy A., Bacher Cedric, Lefèbvre Sebastien, Mille D., Blin J.L., Pajot R., Haffray P., Dupé Francoise (2003). MOREST. MORtalités ESTivales de l'huître creuse Crassostrea gigas. Rapport 2003. Synthèse intermédiaire des résultats 2001-2002-2003 .

2002

Leitao Alexandra, Chaves Raquel, Santos Sara, Boudry Pierre, Guedes Pinto Henrique, Thiriot Quievreux Catherine (2002). Cytogenetic study of Ostrea conchaphila (Mollusca : Bivalvia) and comparative karyological analysis within Ostreinae . Journal of Shellfish Research , 21(2), 685-690 . Open Access version : https://archimer.ifremer.fr/doc/00000/2792/
Tanguy Arnaud, Boutet Isabelle, Bonhomme François, Boudry Pierre, Moraga Dario (2002). Polymorphism of metallothionein genes in the Pacific oyster Crassostrea gigas as a biomarker of response to metal exposure . Biomarkers , 7(6), 439-450 . https://doi.org/10.1080/13547500210157531
Boudry Pierre, Launey Sophie, Diaz-Almela E., Naciri-Graven Yamama, Ledu Christophe, Mira Sara, Taris Nicolas, Bonhomme Francois, Lapegue Sylvie (2002). Population genetics of the European flat oyster (Ostrea edulis) : from larvae to populations . ICES CM 2002 / Theme session U: New Developments and Applications of Genetics in Fisheries Management and Aquaculture. 31p. https://archimer.ifremer.fr/doc/00000/3493/
Launey Sophie, Ledu Christophe, Boudry Pierre, Bonhomme François, Naciri-Graven Yamama (2002). Geographic structure in the European flat oyster (Ostrea edulis L.) as revealed by microsatellite polymorphism . Journal of Heredity , 93(5), 331-338 .
Soletchnik Patrick, Huvet Arnaud, Le Moine Olivier, Razet Daniel, Geairon Philippe, Faury Nicole, Goulletquer Philippe, Boudry Pierre (2002). A comparative field study of growth, survival and reproduction of Crassostrea gigas, C-angulata and their hybrids . Aquatic Living Resources , 15(4), 243-250 . Publisher's official version : https://doi.org/10.1016/S0990-7440(02)01175-0 , Open Access version : https://archimer.ifremer.fr/doc/00000/560/
Arnaud-Haond Sophie, Boudry Pierre, Saulnier Denis, Seaman T, Bonhomme F, Goyard Emmanuel (2002). New anonymous nuclear DNA markers for the pearl oyster Pinctada margaritifera and other Pinctada species . Molecular Ecology Notes , 2(3), 220-222 .
Lapegue Sylvie, Boudry Pierre, Mira Sara, Taris Nicolas, Bonhomme Francois (2002). Diversité génétique et dynamique du recrutement chez l'huître plate Ostrea edulis L. 23ème Colloque de Biologie et Génétique des Populations . https://archimer.ifremer.fr/doc/00000/3494/
Boudry Pierre, McCombie H, Van Dijk H (2002). Vernalization requirement of wild beet Beta vulgaris ssp maritima: among population variation and its adaptive significance . Journal Of Ecology , 90(4), 693-703 . https://doi.org/10.1046/j.1365-2745.2002.00704.x
Lapegue Sylvie, Boutet Isabelle, Leitao Alexandra, Heurtebise Serge, Garcia P, Thiriot Quievreux C, Boudry Pierre (2002). Trans-Atlantic distribution of a mangrove oyster species revealed by 16S mtDNA and karyological analyses . Biological Bulletin , 202(3), 232-242 . Open Access version : https://archimer.ifremer.fr/doc/00000/2790/
Ernande Bruno, Haure Joel, Degremont Lionel, Bedier Edouard, Boudry Pierre (2002). Genetical basis of the plasticity of resource allocation in the Pacific oyster (Crassostrea gigas) . 94th Annual Meeting of the National Shellfisheries Assocation. 2002 April 14-18 , Mystic, Connecticut, USA .
Huvet Arnaud, Gerard Andre, Ledu Christophe, Phelipot Pascal, Heurtebise Serge, Boudry Pierre (2002). Is fertility of hybrids enough to conclude that the two oysters Crassostrea gigas and Crassostrea angulata are the same species? Aquatic Living Resources , 15(1), 45-52 . Publisher's official version : https://doi.org/10.1016/S0990-7440(01)01148-2 , Open Access version : https://archimer.ifremer.fr/doc/00000/1395/
Boudry Pierre, Collet B, Cornette Florence, Hervouet V, Bonhomme F (2002). High variance in reproductive success of the Pacific oyster (Crassostrea gigas, Thunberg) revealed by microsatellite-based parentage analysis of multifactorial crosses . Aquaculture , 204(3-4), 283-296 . https://doi.org/10.1016/S0044-8486(01)00841-9
Bierne Nicolas, David Pierre, Boudry Pierre, Bonhomme F (2002). Assortative fertilization and selection at larval stage in the mussels Mytilus edulis and M-galloprovincialis . Evolution , 56(2), 292-298 . Open Access version : https://archimer.ifremer.fr/doc/00000/2781/
Boudry Pierre, Heurtebise Serge, Lapegue Sylvie, Lam Katherine, McCombie Helen, Leitao Alexandra, Gerard Andre (2002). Etude des ressources génétiques chez les huîtres creuses . https://archimer.ifremer.fr/doc/00199/31008/
Lapegue Sylvie, McCombie Helen, Leitao Alexandra, Bouilly Karine, Sabatier Sebastien, Heurtebise Serge, Boudry Pierre, Thiriot Catherine, Gerard Andre (2002). Etude des anomalies chromosomiques chez Crassostrea gigas . https://archimer.ifremer.fr/doc/00199/31013/
Fabioux Caroline, Huvet Arnaud, Lapegue Sylvie, Heurtebise Serge, Boudry Pierre (2002). Past and present geographical distribution of populations of Portuguese (Crassostrea angulata) and Pacific (C. gigas) oysters along the European and north African Atlantic coats . Haliotis , 31, 33-44 . Open Access version : https://archimer.ifremer.fr/doc/00000/2785/

2001

Huvet Arnaud, Balabaud K, Bierne Nicolas, Boudry Pierre (2001). Microsatellite analysis of 6-hour-old embryos reveals no preferential intraspecific fertilization between cupped oysters Crassostrea gigas and Crassostrea angulata . Marine Biotechnology , 3(5), 448-453 . Publisher's official version : https://doi.org/10.1007/s10126-001-0017-2 , Open Access version : https://archimer.ifremer.fr/doc/00000/436/
Leitao Alexandra, Boudry Pierre, Thiriot Quievreux Catherine (2001). Evidence of differential chromosome loss in aneuploid karyotypes of the Pacific oyster, Crassostrea gigas . Génome , 44(4), 735-737 . Open Access version : https://archimer.ifremer.fr/doc/00000/742/
Haure Joel, Huvet Arnaud, Palvadeau Hubert, Nourry Max, Martin Jean-Louis, Boudry Pierre, Penisson Christian (2001). Etude de la croissance et de l'activité écophysiologique des huîtres creuses Crassostrea gigas, Crassostrea angulata et de leurs hybrides en système contrôlé . DRV/RST/RA/LCPL/-2001 -09 . https://archimer.ifremer.fr/doc/00000/1636/
Lapegue Sylvie, Diaz-Almela E., Launey Sophie, Ledu Christophe, Boudry Pierre, Naciri-Graven Yamama, Bonhomme Francois (2001). Différenciation génétique des populations d'huître plate européenne, Ostrea edulis, à l'aide de marqueurs des génomes mitochondrial et nucléaire . Actes Journées Conchylicoles, Ifremer Nantes, 3-4 avril 2001 . https://archimer.ifremer.fr/doc/00000/3273/
Huvet Arnaud, Fabioux Caroline, Lapegue Sylvie, Boudry Pierre (2001). Hybridation naturelle entre les deux sous-espèces d'huîtres creuses Crassostrea gigas et Crassostrea angulata au sud de l'Europe . Actes Journées Conchylicoles, Ifremer Nantes, 3-4 avril 2001 . https://archimer.ifremer.fr/doc/00000/3282/
Haure Joel, Huvet Arnaud, Palvadeau Hubert, Nourry Max, Penisson Christian, Boudry Pierre, Martin Jean-Louis (2001). Etude comparative de la croissance et de l'activité écophysiologique des huîtres creuses Crassostrea gigas, Crassostrea angulata et des hybrides . Actes Journées Conchylicoles, Ifremer Nantes, 3-4 avril 2001 . https://archimer.ifremer.fr/doc/00000/3281/
Leitao Alexandra, Boudry Pierre, McCombie Helen, Lapegue Sylvie, Gerard Andre, Thiriot-Quievreux Catherine (2001). Le phénomène de l'anauploïdie et sa relation avec la croissance chez l'huître creuse Crassostrea gigas . Actes Journées Conchylicoles, Ifremer Nantes, 3-4 avril 2001 . https://archimer.ifremer.fr/doc/00000/3280/
Degremont Lionel, Moal Jeanne, Daniel Jean-Yves, Boudry Pierre, Van Vormhoudt A., Sellos D., Samain Jean-Francois (2001). Etude du polymorphisme des gènes de l'amylase chez Crassostrea gigas : relation avec les paramètres physiologiques de l'assimilation et croissance . Actes Journées Conchylicoles, Ifremer Nantes, 3-4 avril 2001 . https://archimer.ifremer.fr/doc/00000/3269/
Heurtebise Serge, Boutet Isabelle, Verden B., Lapegue Sylvie, Leitao Alexandra, Thiriot-Quievreux Catherine, Garica P., Boudry Pierre (2001). Phylogéographie des huîtres de mangrove de l'Océan Atlantique Sud : C. gasar et C. rhisophorae . Actes Journées Conchylicoles, Ifremer Nantes, 3-4 avril 2001 . https://archimer.ifremer.fr/doc/00000/3278/
Ernande Bruno, Boudry Pierre, Heurtebise Serge, Haure Joel, Martin Jean-Louis (2001). Bases génétiques et plasticité de la croissance et de la survie chez l'huître creuse, Crassostrea gigas . Actes Journées Conchylicoles, Ifremer Nantes, 3-4 avril 2001 . https://archimer.ifremer.fr/doc/00000/3279/
Leitao Alexandra, Boudry Pierre, McCombie Helen, Gerard Andre, Thiriot-Quievreux Catherine (2001). Experimental evidence for a genetic basis to differences in aneuploidy in the Pacific oyster (Crassostrea gigas) . Aquatic Living Resources , 14(4), 233-237 . Open Access version : https://archimer.ifremer.fr/doc/00000/2700/
Leitao Alexandra, Boudry Pierre, Thiriot-Quievreux C (2001). Negative correlation between aneuploidy and growth in the Pacific oyster, Crassostrea gigas: ten years of evidence . Aquaculture , 193(1-2), 39-48 .
Boudry Pierre, Huvet Arnaud, Fabioux Caroline, Lapegue Sylvie (2001). Evidence for natural hybrtidisation between the two oyster sub-species Crassostrea gigas and Crassostrea angulata in Southern Europe . 34th Annual Meeting of the Populations Genetics Group. 2001 3-6 janvier, Sheffields, UK .
Lapegue Sylvie, McCombie Helen, Leitao Alexandra, Bouilly Karine, Sabatier Sebastien, Heurtebise Serge, Boudry Pierre, Thiriot Quievreux Catherine, Gerard Andre (2001). Etude des anomalies chromosomiques chez Crassostrea gigas - Contrat de Plan Région Poitou-Charentes 2000-2006. Convention 2000 . https://archimer.ifremer.fr/doc/00043/15474/

2000

Huvet Arnaud, Lapegue Sylvie, Magoulas A, Boudry Pierre (2000). Mitochondrial and nuclear DNA phylogeography of Crassostrea angulata, the Portuguese oyster endangered in Europe . Conservation Genetics , 1(3), 251-262 . Publisher's official version : https://doi.org/10.1023/A:1011505805923 , Open Access version : https://archimer.ifremer.fr/doc/00000/707/
Boudry Pierre, Leitao Alexandra, McCombie Helen, Thiriot-Quievreux Catherine (2000). Aneuploidy and its relationship with growth in different populations of the Pacific oyster (Crassostrea gigas, Thunberg) . Genetics in Aquaculture VII. 15-22 July 2000, Townsville, Australia .
Berthe Franck, Goarant Cyrille, Saulnier Denis, Burgeot Thierry, Boudry Pierre, Thebault Anne, Goulletquer Philippe, Gerard Andre (2000). Département Ressources Aquacoles. Journées "Pathologie". Ile de Berder - 21 et 22 juin 2000 . Journées "Pathologie", Département Ressources Aquacoles, 21-22 juin 2000, Ile de Berder, France .
Mitta Guillaume, Hubert Francoise, Dyrynda Ea, Boudry Pierre, Roch Philippe (2000). Mytilin B and MGD2, two antimicrobial peptides of marine mussels: gene structure and expression analysis . Developmental And Comparative Immunology , 24(4), 381-393 .
Lapegue Sylvie, Boutet Isabelle, Leitao Alexandra, Thiriot-Quievreux Catherine, Heurtebise Serge, Garcia P., Boudry Pierre (2000). Phylogeography of mangrove oysters from the Southern Atlantic ocean : Crassostrea gasar and Crassostre rhizophorae . World Aquaculture Society . https://archimer.ifremer.fr/doc/00000/3496/
Ernande Bruno, Boudry Pierre, Heurtebise Serge, Haure Joel, Martin Jean-Louis (2000). Genetic basis for the plasticity of growth and survival in Crassostrea gigas . Aqua 2000 - European Aquaculture Society and the World Aquaculture Society Conference. 2-6 mai 2000, Nice .
Lapegue Sylvie, Diaz-Almela E., Launey Sophie, Ledu Christophe, Boudry Pierre, Naciri-Graven Yamama, Bonhomme Francois (2000). Mitochondrial and microsatellite genetic differentiation of the flat oyster Ostrea edulis along the european coasts, and comparison with allozyme data . Aqua 2000 - European Aquaculture Society and the World Aquaculture Society Conference. 2-6 mai 2000, Nice .
Boudry Pierre, Collet Bertrand, Cornette Florence, Hervouet Veronique, Bonhomme Francois (2000). Microsatellite markers as a tool to study reproductive success in the Pacific oyster, Crassostrea gigas (Thunberg), under controlled hatchery conditions . 92nd Annual Meeting of the National Shellfisheries Association. March 19th – 23rd 2000, Seattle .
Huvet Arnaud, Boudry Pierre, Ohresser M, Delsert Claude, Bonhomme F (2000). Variable microsatellites in the Pacific Oyster Crassostrea gigas and other cupped oyster species . Animal Genetics , 31(1), 71-72 . Publisher's official version : https://doi.org/10.1111/j.1365-2052.2000.579-5.x , Open Access version : https://archimer.ifremer.fr/doc/00000/703/
Boudry Pierre, Huvet Arnaud, Fabioux Caroline, Lapegue Sylvie, Heurtebise Serge, Ledu Christophe, Blouin Frederic, Phelipot Pascal, Gerard Andre (2000). Programme 3 : Gestion durable des productions ostréicoles : les apports de la génétique. Convention 2000 RPC-A-530 Ifremer - Région Poitou-Charentes . Rapport Contrat Région Poitou-Charentes . https://archimer.ifremer.fr/doc/00044/15564/
Lapegue Sylvie, McCombie Helen, Leitao Alexandra, Heurtebise Serge, Boudry Pierre, Thiriot Quievreux Catherine, Gerard Andre (2000). Etude des anomalies chromosomiques chez Crassostrea gigas. Contrat Région Poitou-Charentes 2000-2006. Convention 99 . Rapport Contrat Région Poitou-Charentes . https://archimer.ifremer.fr/doc/00043/15473/

1999

Berthe Franck, Boudry Pierre (1999). Pister les huîtres et leurs pathogènes . Biofutur , 1999(195), 38-42 . https://doi.org/10.1016/S0294-3506(00)87174-4
Boudry Pierre, Huvet Arnaud (1999). Mitochondrial and nuclear DNA phylogeography of two cupped oysters Crassostrea gigas and Crassostrea angulata . Biology & Evolution of the Bivalvia Conference. 14-17 september 1999, Cambridge .
Boudry Pierre, Collet Bertrand, Cornette Florence, Hervouet Veronique, Kotoulas G., Bonhomme Francois (1999). Mise en évidence expérimentale de la variance du succès reproducteur chez l'huître creuse Crassostrea gigas (Thunberg) . XXIème Réunion Annuelle du Groupe de Biologie et Génétique des Populations. 5-9 septembre 1999, Rennes .
Leitao Alexandra, Thiriot-Quievreux Catherine, Malheiro Isabel, Boudry Pierre (1999). A "G" chromosome banding study of three cupped oyster species : Crassostrea gigas, Crassostrea angulata and Crassostrea virginica (Mollusca : Bivalvia) . Genetics Selection Evolution , 31, 519-527 . Open Access version : https://archimer.ifremer.fr/doc/00000/2736/
Leitao Alexandra, Thiriot Quievreux Catherine, Boudry Pierre, Malheiro Isabel (1999). A 'G' chromosome banding study of three cupped oyster species: Crassostrea gigas, Crassostrea angulata and Crassostrea virginica (Mallusca : Bivalvia) . Genetics Selection Evolution , 31(5-6), 519-527 . https://doi.org/10.1051/gse:19990507
Goulletquer Philippe, Wolowicz Maciej, Latala Adam, Geairon Philippe, Huvet Arnaud, Boudry Pierre (1999). Comparative analysis of oxygen consumption rates between cupped oyster spat of Crassostrea gigas of French, Japanese, Spanish and Taiwanese origins . Aquatic Living Resources , 12(4), 271-277 . Publisher's official version : https://doi.org/10.1016/S0990-7440(00)86638-3 , Open Access version : https://archimer.ifremer.fr/doc/00000/859/
Boudry Pierre (1999). Molecular markers as a tool to study genetic resources in oysters . Workshop on Farm Animal Biodiversity, Utrecht Unviersity, The Netherlands, 4 june 1999, pp. 19-20 . https://archimer.ifremer.fr/doc/00000/3212/
Desplanque B, Boudry Pierre, Broomberg K, Saumitou-Laprade P, Cuguen J, Van Dijk H (1999). Genetic diversity and gene flow between wild, cultivated and weedy forms of Beta vulgaris L-(Chenopodiaceae), assessed by RFLP and microsatellite markers . Theoretical And Applied Genetics , 98(8), 1194-1201 . https://doi.org/10.1007/s001220051184
Collet Bertrand, Boudry Pierre, Thebault Anne, Heurtebise Serge, Morand Berenice, Gerard Andre (1999). Relationship between pre- and post-metamorphic growth in the Pacific oyster Crassostrea gigas (Thunberg) . Aquaculture , 175(3-4), 215-226 . Publisher's official version : https://doi.org/10.1016/S0044-8486(99)00042-3 , Open Access version : https://archimer.ifremer.fr/doc/00000/468/
Boudry Pierre, Collet Bertrand, Kotoulas G., Hervouet Veronique, Cornette Florence, Bonhomme Francois, Gerard Andre (1999). Utilisation des marqueurs microsatellites pour l'étude des contributions parentales chez l'huître creuse Crassostrea gigas . Présentation Journées Conchylicoles, Ifremer Nantes, 24-25 mars 1999 . https://archimer.ifremer.fr/doc/00000/3452/
Boudry Pierre, Heurtebise Serge, Lapegue Sylvie, Ledu Christophe, Phelipot Pascal, Gerard Andre (1999). Acclimatation de nouvelles espèces d'huîtres creuses du genre Crassostrea : hybridation et conservatoire de souches. Contrat Région Poitou-Charentes 1999 - Convention 99 RPC-A-203 "Génétique" . Contrat Région Poitou-Charentes 1999 . https://archimer.ifremer.fr/doc/00044/15514/
Leitao Alexandra, Boudry Pierre, Labat Jp, Thiriot-Quievreux C (1999). Comparative karyological study of cupped oyster species . Malacologia , 41(1), 175-186 . Open Access version : https://archimer.ifremer.fr/doc/00000/2737/
Lapegue Sylvie, Thiriot Quievreux Catherine, McCombie Helen, Heurtebise Serge, Boudry Pierre, Robert Stephane, Soletchnik Patrick, Goulletquer Philippe, Gerard Andre (1999). Etude du niveau d'aneuploïdie dans les populations des zones de captage du bassin de Marennes-Oléron - Contrat Plan Etat Région Poitou-Charentes 1999 - Rapport 1999 . Convention 99 RPC-A-201 "Génétique" . https://archimer.ifremer.fr/doc/00044/15522/

1998

Cochennec Nathalie, Renault Tristan, Boudry Pierre, Chollet Bruno, Gerard Andre (1998). Bonamia-like parasite found in the Suminoe oyster Crassostea rivularis reared in France . Diseases of aquatic organisms , 34(3), 1936-197 . Open Access version : https://archimer.ifremer.fr/doc/00000/2904/
Cochennec Nathalie, Renault Tristan, Boudry Pierre, Chollet Bruno, Gerard Andre (1998). Bonamia-like parasite found in the Suminoe oyster Crassostrea rivularis reared in France . Diseases Of Aquatic Organisms , 34(3), 193-197 . Publisher's official version : https://doi.org/10.3354/dao034193 , Open Access version : https://archimer.ifremer.fr/doc/00446/55795/
Boudry Pierre, Collet Bertrand, Kotoulas Georgios, Magoulas Antonio, Hervouet Veronique, Bonhomme Francois, Gerard Andre (1998). The use of microsatellite markers for parentage analysis in the Pacific cupped oyster, Crassostrea gigas (Thunberg) . Actes du colloque, Cascais, Portugal, 16-19 septembre 1998, K: 7 . https://archimer.ifremer.fr/doc/00000/2739/
Boudry Pierre, Heurtebise Serge, Collet Bertrand, Cornette Florence, Gerard Andre (1998). Differentiation between populations of the Portuguese oyster, Crassostrea angulata (Lamark) and the Pacific oyster, Crassostrea gigas (Thunberg), revealed by mtDNA RFLP analysis . Journal Of Experimental Marine Biology And Ecology , 226(2), 279-291 . https://doi.org/http://dx.doi.org/10.1016/S0022-0981(97)00250-5
Boudry Pierre, Barre Marc, Gerard Andre (1998). Genetic improvement and selection in shellfish : a review based on oyster research and production . Cahiers Options Méditerranéennes , 34, 61-75 . Open Access version : https://archimer.ifremer.fr/doc/00000/2740/
Boudry Pierre, Launey Sophie, Huvet Arnaud (1998). Variabilité et structuration génétique chez deux espèces d'huitres cultivées Crassostrea gigas et Ostrea edulis : tentative d'approche comparative . Wokshop Dispersion larvaire et conséquences sur la variabilité génétique spatiale et temporelle du recrutement en milieu marin. Table Ronde PNDR. 8-9 Janvier 1998, Perpignan .
Boudry Pierre, Collet Bertrand, Goyard Emmanuel, Lapegue Sylvie, Heurtebise Serge, Ledu Christophe, Phelipot Pascal, Cornette Florence, Bougrier Serge, Gerard Andre (1998). Amélioration de la qualité chez l'huître creuse Crassostrea gigas par la sélection de souches performantes. Synthèse Finale . Contrat de plan Etat/Région Poitou Charentes 1994-1998. Convention 98 RPC-R-8 "Génétique". Action de Recheche 2 .
Gerard Andre, Boudry Pierre, Bougrier Serge, Buestel Dominique, Samain Jean-Francois, Hawkins A. J. S., Wilins N., Zouros Eleftherios, Bonhomme Francois, Thiriot Quievreux Catherine (1998). Genetic bases and variability of physiological traits involved in growth in Crassostrea gigas - Third Progress Report 1st January-31st December 1998 - Contract N°FAIR 95-421 Commission of the European Communities . Contract n° FAIR 95-421 . https://archimer.ifremer.fr/doc/00050/16151/
Goyard Emmanuel, Lapegue Sylvie, Gerard Andre, Boudry Pierre (1998). Point sur le programme huître plate - Complément au compte-rendu de réunion REGEMO sur l'Amélioration Génétique de l'huître plate du 11 mars 1998 . https://archimer.ifremer.fr/doc/00049/15980/
Baud Jean-Pierre, Palvadeau Hubert, Nourry Max, Haure Joel, Penisson Christian, Boudry Pierre (1998). Bases génétiques et variabilité des caractères physiologiques impliqués dans la croissance de Crassostrea gigas . Rapport convention annuelle SMIDAP n°97 05266 . https://archimer.ifremer.fr/doc/00048/15881/
Boudry Pierre, Heurtebise Serge, Huvet Arnaud, Chollet Bruno, Ledu Christophe, Phelipot Pascal, Gerard Andre (1998). Acclimatation de nouvelles espèces d'huîtres creuse du genre Crassostrea: hybridation et conservatoire de souches - Contrat de Plan Etat Région Poitou-Charentes 1994-1998 - Synthèse finale . Convention 98 RPC-R-8 "Génétique" . https://archimer.ifremer.fr/doc/00044/15520/
Huvet Arnaud, Boudry Pierre, Baud Jean-Pierre, Nourry Max, Phelipot Pascal, Gerard Andre, Ledu Christophe, Heurtebise Serge, Cornette Florence, Blouin Frederic, Bedier Edouard, Lapegue Sylvie (1998). Ressources génétiques chez l'huître creuse Crassostrea gigas : variabilité, différenciation et adaptation aux conditions de production en Charente Maritime . Contrat Conseil Général de la Charente-Maritime . https://archimer.ifremer.fr/doc/00044/15563/

1997

Boudry Pierre, Barre Marc, Gerard Andre (1997). Genetic improvement and selection in shellfish : a review based on oyster research and production . Proceeding TECAM Seminar on Genetics and Breeding in the Mediterranean Aquaculture Species CIHEAM-FAO, Zaragoza (Spain) 28-20 april 1997 . https://archimer.ifremer.fr/doc/00000/3499/
Collet Bertrand, Boudry Pierre, Bougrier Serge, Heurtebise Serge, Phelipot Pascal, Ledu Christophe, Morand Berenice, Heral Maurice, Gerard Andre (1997). Etudes des bases génétiques et de la varibailité des caractères physiologiques impliqués dans la croissance chez l'huître creuse Crassostrea gigas . Actes Journées Conchylicoles, Ifremer Nantes, 18-19 mars 1997 . https://archimer.ifremer.fr/doc/00000/3243/
Barre Marc, Naciri Yamama, Boudry Pierre, Goyard Emmanuel, Launey Sophie, Cochennec Nathalie, Heurtebise Serge, Ledu Christophe, Phelipot Pascal, Gerard Andre (1997). Historique, expériences en cours et perspectives du programme de sélection de l'huître plate Ostrea edulis pour la résistance à la bonamiose . Actes Journées Conchylicoles, Ifremer Nantes, 18-19 mars 1997 . https://archimer.ifremer.fr/doc/00000/3244/
Boudry Pierre, Heurtebise Serge, Collet Bertrand, Cornette Florence, Ledu Christophe, Phelipot Pascal, Gerard Andre (1997). Ressources génétiques chez les huîtres creuses : conservatoire de souche et marqueurs moléculaires . Actes Journées Conchylicoles, Ifremer Nantes, 18-19 mars 1997 . https://archimer.ifremer.fr/doc/00000/3242/
Vandijk H, Boudry Pierre, McCombie H, Vernet P (1997). Flowering time in wild beet (Beta vulgaris ssp. maritima) along a latitudinal cline . Acta Oecologica-international Journal Of Ecology , 18(1), 47-60 . https://doi.org/10.1016/S1146-609X(97)80080-X
Boudry Pierre, Lapegue Sylvie, Goyard Emmanuel, Heurtebise Serge, Ledu Christophe, Phelipot Pascal, Gerard Andre (1997). Acclimatation de nouvelles espèces d'huîtres creuses du genre Crassostrea: hybridation et conservatoire de souches. Amélioration de la qualité chez l'huîtres creuses Crassostrea gigas par sélection de souches performantes - Contrat de Plan Etat Région Poitou-Charentes 1994-1998 - Convention 97 RPC-R-54 "Génétique" - Rapport année 1997 . Convention 97 RPC-R-54 "Génétique" . https://archimer.ifremer.fr/doc/00044/15519/
Gerard Andre, Boudry Pierre, Bougrier Serge, Hawkins A. J. S., Thiriot Quievreux Catherine, Wilkins N. P., Zouros Eleftherios, Bonhomme Francois, Buestel Dominique, Samain Jean-Francois (1997). Genetic bases and variability of physiological traits involved in growth in Crassostrea gigas - Second Progress Report 1st January-31st December 1997 - Contract n° FAIR 95-421 Commission of the European Communities . Contract n° FAIR 95-421 . https://archimer.ifremer.fr/doc/00050/16150/

1996

Boudry Pierre, Chatain Beatrice, Naciri-Graven Yamama, Lemaire Christophe, Gerard Andre (1996). Genetical improvement of marine fish and shellfish : a french perspective . International Marine Biotechnology Conference, June 7-12, St John's, Newfoundland and Labrador, Canada . https://archimer.ifremer.fr/doc/00000/3206/
Gerard Andre, Boudry Pierre, Bougrier Serge, Hawkins A. J. S., Thiriot Quievreux Catherine, Wilkinns N. P., Zouros Eleftherios, Bonhomme Francois (1996). Genetic bases and variability of physiological traits involved in growth in Crassostrea gigas - First Progress Report 1st January-31st December 1996 - Contract n° FAIR 95-421 Commission of the European Communities . Contract n° FAIR 95-421 . https://archimer.ifremer.fr/doc/00050/16149/
Boudry Pierre, Naciri Yamama, Collet Bertrand, Cornette Florence, Heurtebise Serge, Ledu Christophe, Chollet Bruno, Phelipot Pascal, Gerard Andre (1996). Acclimatation de nouvelles espèces d'huîtres creuses du genre Crassostrea: hybridation et conservatoire de souches. Amélioration de la qualité chez l'huître creuse Crassostrea gigas par sélection de souches performantes - Rapport année 1996 . Convention 96 RPC-R-65 "Génétique" . https://archimer.ifremer.fr/doc/00044/15516/

1995

Gerard Andre, Naciri-Graven Yamama, Boudry Pierre, Launey Sophie, Heurtebise Serge, Ledu Christophe, Phelipot Pascal (1995). Contrôle de la gamétogénèse des huîtres creuses et plates. Relations "reproduction" et "génétique" . Rapport due groupe de travail La Reproduction naturelle et contrôlée des bivalves cultivés en France - Ifremer-Nantes, 14 et 15 novembre 1995, pp 99-111 . https://archimer.ifremer.fr/doc/00000/3210/
Boudry Pierre, Naciri Yamama, Heral Maurice, Collet Bertrand, Bougrier Serge, Geffard Olivier, Ledu Christophe, Phelipot Pascal, Heurtebise Serge, Gerard Andre (1995). Amélioration de la qualité chez l'huître creuse Crassostrea gigas par sélection de souches performantes - Contrat de Plan Etat Région Poitou-Charentes 1994-1998 - Rapport année 1995 . Convention 95/RPC-R-57 "Génétique" . https://archimer.ifremer.fr/doc/00044/15518/
Boudry Pierre, Naciri Yamama, Heurtebise Serge, Delsert Claude, Ledu Christophe, Phelipot Pascal, Chollet Bruno, Cochennec Nathalie, Gerard Andre (1995). Acclimatation de nouvelles espèces d'huîtres creuses du genre Crassostrea: hybridations et conservatoire de souches. Contrat de Plan Etat Région Poitou- Charentes 1994-1998 - Convention 95/RPC-R-57 "Génétique" - Rapport année 1995 . Rapport Contrat Région Poitou-Charentes . https://archimer.ifremer.fr/doc/00044/15515/

1994

Boudry Pierre, Wieber R, Saumitoulaprade P, Pillen K, Vandijk H, Jung C (1994). Identification of RFLP markers closely linked to the bolting gene B and their significance for the study of the annual habit in beets (Beta vulgaris L.). Theoretical And Applied Genetics , 88(6-7), 852-858 . https://doi.org/10.1007/BF01253996
Boudry Pierre, Naciri Yamama, Launey Sophie, Ledu Christophe, Phelipot Pascal, Heurtebise Serge, Gerard Andre (1994). Acclimatation de nouvelles espèces d'huîtres creuses du genre Crassostrea: hybridation et conservatoire de souches. Contrat Région Poitou-Charentes 1994-1998 - 1ère partie : rapport année 1994 . https://archimer.ifremer.fr/doc/00044/15517/

1993

Boudry Pierre, Morchen M, Saumitoulaprade P, Vernet P, Vandijk H (1993). The origin and evolution of weed beets: consequences for the breeding and release of herbicide resistant transgenic sugar beets . Theoretical And Applied Genetics , 87(4), 471-478 . https://doi.org/10.1007/BF00215093


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