Marie-Anne Cambon Bonavita

Marie-Anne Cambon Bonavita

Laboratoire de Microbiologie des Environnements Extrêmes (PDG-REM-EEP-LMEE)

Contact par courriel

02 98 22 47 56

Fax : 02 98 22 47 57

Employeur : Ifremer

Site : Brest

Adresse postale : Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané

URL : https://annuaire.ifremer.fr/cv/15841/

En quelques mots

Marie-Anne Cambon-Bonavita, ingénieur Agronome INA-PG 91 a réalisé sa thèse à Ifremer en microbiologie générale et appliquée (Paris7) portant sur la recherche et la mise au point d’ADN polymérases thermostables pour des applications biotechnologiques (réplication in vitro de l’ADN). Recrutée en 1997 à Ifremer de Brest au laboratoire de microbiologie des environnements extrêmes, elle développe alors les techniques de biologie moléculaires appliquées à l’identification des espèces marines et aux études de diversité des communautés microbiennes. Attirée tant par la géologie que la biologie, dès 2000, elle met en place au laboratoire un projet de recherche portant sur les symbioses dans les milieux extrêmes. Ses principaux centres d’intérêts sont les études pluridisciplinaires en milieux profonds, portant sur les interactions entre la faune, les communautés microbiennes et leur environnement minéral ainsi que sur les développements technologiques nécessaires pour ces études. Ces études lui ont permis de soutenir son HDR (Habilitation à Diriger les Recherches) en 2007. Chef de mission de la campagne BICOSE en 2014, elle est impliquée dans des études portant sur la pérennité et la résilience des écosystèmes profonds, leur fonctionnement, l’étude des cycles de vie, la protection de ces écosystèmes et la diffusion des connaissances au plus grand nombre.

Le blog BICOSE : http://blogs.ifremer.fr/bicose/


Direction de campagnes océanographiques

MissionNavireDateZone
BICOSE 2Pourquoi Pas?2018Océan Atlantique Nord
ESSNAUT 2017Pourquoi Pas?2017Zonex 20 ; 4 et 64
BICOSEPourquoi Pas?2014Ride médio Atlantique, sites TAG et Snake Pit


Jeux de données

2019

Cambon-Bonavita Marie-Anne (2019). Rimicaris exoculata gut microbiome genomes. IFREMER. https://doi.org/10.12770/437f34c4-aba3-4962-9f6f-4c469defc483

2018

Aube Johanne, Cambon-Bonavita Marie-Anne (2018). Metagenomic and metatranscriptomic analyses of the hydrothermal shrimp Rimicaris exoculata symbiosis. IFREMER. https://doi.org/10.12770/4186eeef-32b1-4ffb-9a40-61a02a3852b7


Bibliographie

2019

Zeppilli Daniela, Bellec Laure, Cambon-Bonavita Marie-Anne, Decraemer Wilfrida, Fontaneto Diego, Fuchs Sandra, Gayet Nicolas, Mandon Perrine, Michel Loic, Portail Marie, Smol Nic, Sørensen Martin V., Vanreusel Ann, Sarrazin Jozee (2019). Ecology and trophic role of Oncholaimus dyvae sp. nov. (Nematoda: Oncholaimidae) from the lucky strike hydrothermal vent field (Mid-Atlantic Ridge) . Bmc Zoology , 4(1), 6 (15p.) . Publisher's official version : https://doi.org/10.1186/s40850-019-0044-y , Open Access version : https://archimer.ifremer.fr/doc/00508/61985/
Alix Anne-Sophie, Besson Florian, Cambon Bonavita Marie-Anne, Chu Nan-Chin, Fouquet Yves, Lacroix Denis, Le Gall Morgane, Menot Lenaick, Pelleter Ewan, Sarradin Pierre-Marie, Ybert Sebastien (2019). Rapport de veille scientifique et technologique relative aux ressources minérales non énergétiques des grands fonds . Convention référence 19/1000 085 entre le Ministère de la Transition Ecologique et Solidaire – Direction de l’Eau et de la Biodiversité et l’Institut français de recherche pour l’exploitation de la mer – Action 5. 2. REM/2019-008. Rapport n°8 .
Bellec Laure, Cambon Bonavita Marie-Anne, Hourdez Stéphane, Jebbar Mohamed, Tasiemski Aurélie, Durand Lucile, Gayet Nicolas, Zeppilli Daniela (2019). Chemosynthetic ectosymbionts associated with a shallow-water marine nematode . Scientific Reports , 9(1), 7019 (14p.) . Publisher's official version : https://doi.org/10.1038/s41598-019-43517-8 , Open Access version : https://archimer.ifremer.fr/doc/00494/60614/
Methou Pierre, Hernández-Ávila Ivan, Aube Johanne, Cueff-Gauchard Valerie, Gayet Nicolas, Amand Louis, Shillito Bruce, Pradillon Florence, Cambon-Bonavita Marie-Anne (2019). Is It First the Egg or the Shrimp? – Diversity and Variation in Microbial Communities Colonizing Broods of the Vent Shrimp Rimicaris exoculata During Embryonic Development . Frontiers In Microbiology , 10(808), 19p. Publisher's official version : https://doi.org/10.3389/fmicb.2019.00808 , Open Access version : https://archimer.ifremer.fr/doc/00489/60067/
Besson Florian, Alix Anne-Sophie, Cathalot Cecile, Fouquet Yves, Pelleter Ewan, Cambon Bonavita Marie-Anne, Menot Lenaick, Pradillon Florence, Roussel Erwan, Cueff-Gauchard Valerie, Ybert Sebastien (2019). Rapport annuel sur les activités menées par l’Ifremer dans le cadre du contrat d'exploration des sulfures polymétalliques conclu, au nom de la France, avec l'Autorité Internationale des Fonds Marins (AIFM). Période du 1er janvier au 31 décembre 2018 . REM/2019-002 .

2018

Alix Anne-Sophie, Besson Florian, Cambon Bonavita Marie-Anne, Chu Nan-Chin, Fouquet Yves, Lacroix Denis, Le Gall Morgane, Menot Lenaick, Pelleter Ewan, Sarradin Pierre-Marie, Ybert Sebastien (2018). Rapport de veille scientifique et technologique relative aux ressources minérales non énergétiques des grands fonds . Convention référence 18/2102427980 entre le Ministère de la Transition Ecologique et Solidaire – Direction de l’Eau et de la Biodiversité et l’Institut français de recherche pour l’exploitation de la mer – Action 6.2. REM/2018-035. Rapport n°7 .
Apremont Vincent, Cambon-Bonavita Marie-Anne, Cueff-Gauchard Valerie, Francois David, Pradillon Florence, Corbari Laure, Zbinden Magali (2018). Gill chamber and gut microbial communities of the hydrothermal shrimp Rimicaris chacei Williams and Rona 1986: A possible symbiosis . Plos One , 13(11), e0206084 (22p.) . Publisher's official version : https://doi.org/10.1371/journal.pone.0206084 , Open Access version : https://archimer.ifremer.fr/doc/00465/57680/
Cambon Bonavita Marie-Anne (2018). BICOSE 2. Biodiversité, Interactions, Connectivité et Symbioses en milieux Extrêmes 2 . Rapport de Campagne. Tome II : rapports scientifiques .
Cambon Bonavita Marie-Anne (2018). BICOSE 2. Biodiversité, Interactions, Connectivité et Symbioses en milieux Extrêmes 2. Rapport de Campagne. Tome I .
Methou Pierre, Hernandez Ivan, Shillito Bruce, Aube Johanne, Cueff-Gauchard Valerie, Cambon Bonavita Marie-Anne, Pradillon Florence (2018). Is it the Egg first or the Shrimp? Diversity and evolution of the microbial communities colonizing broods of the vent shrimp Rimicaris exoculata throughout embryonic development . DSBS 2018 - 15th Deep-Sea Biology Symposium. 09 au 14/09/2018, Monterey (Californie) .
Zeppilli Daniela, Bellec Laure, Cueff-Gauchard Valerie, Durand Lucile, Portail Marie, Michel Loic, Sarrazin Jozee, Vanreusel Anne, Cambon Bonavita Marie-Anne (2018). Nematode-prokaryote interactions in deep-sea hydrothermal vents . DSBS 2018 - 15th Deep-Sea Biology Symposium. 09 au 14/09/2018, Monterey (Californie) .
Bellec Laure, Cambon-Bonavita Marie-Anne, Cueff-Gauchard Valerie, Durand Lucile, Gayet Nicolas, Zeppilli Daniela (2018). A Nematode of the Mid-Atlantic Ridge Hydrothermal Vents Harbors a Possible Symbiotic Relationship . Frontiers In Microbiology , 9(2246), 12p. Publisher's official version : https://doi.org/10.3389/fmicb.2018.02246 , Open Access version : https://archimer.ifremer.fr/doc/00457/56846/
Cambon-Bonavita Marie-Anne, Fouquet Yves, Pelleter Ewan, Menot Lenaick, Alix Anne-Sophie, Cathalot Cecile, Pradillon Florence, Roussel Erwan, Ybert Sebastien (2018). Rapport annuel sur les activités menées par l’Ifremer dans le cadre du contrat d'exploration des sulfures polymétalliques conclu, au nom de la France, avec l'Autorité Internationale des Fonds Marins (AIFM). Période du 1er janvier au 31 décembre 2017 . REM/2018-006 .

2017

Methou Pierre, Hernandez Ivan, Cueff-Gauchard Valerie, Cambon-Bonavita Marie-Anne, Pradillon Florence (2017). Quel type d’association microbienne sur les oeufs de la crevette Rimicaris exoculata ? AFEM2017 - VIIIe Colloque de l'Association Francophone d'Ecologie Microbienne "Microbiomes : des Environnements Naturels à l'Homme Les micro-organismes, pionniers de la vie ". 17-20 oct. 2017 Camaret-sur-Mer, France .
Alix Anne-Sophie, Besson Florian, Cambon-Bonavita Marie-Anne, Chu Nan-Chin, Fouquet Yves, Lacroix Denis, Le Gall Morgane, Menot Lenaick, Pelleter Ewan, Sarradin Pierre-Marie, Ybert Sebastien (2017). Ressources Minérales Marines. Rapport de Veille. Convention référence 17/1212982 entre le Ministère de l’Environnement, de l’Energie et de la Mer et l’Institut français de recherche pour l’exploitation de la mer – Action 5.2 . REM/2017-023 .
Le Bloa Simon, Durand Lucile, Cueff-Gauchard Valerie, Le Bars Josiane, Taupin Laure, Marteau Charlotte, Bazire Alexis, Cambon-Bonavita Marie-Anne (2017). Highlighting of quorum sensing lux genes and their expression in the hydrothermal vent shrimp Rimicaris exoculata ectosymbiontic community. Possible use as biogeographic markers . Plos One , 12(3), e0174338 (1-19) . Publisher's official version : https://doi.org/10.1371/journal.pone.0174338 , Open Access version : https://archimer.ifremer.fr/doc/00377/48841/
Cowart Dominique, Durand Lucile, Cambon-Bonavita Marie-Anne, Arnaud-Haond Sophie (2017). Investigation of bacterial communities within the digestive organs of the hydrothermal vent shrimp Rimicaris exoculata provide insights into holobiont geographic clustering . Plos One , 12(3), e0172543 (1-22) . Publisher's official version : https://doi.org/10.1371/journal.pone.0172543 , Open Access version : https://archimer.ifremer.fr/doc/00376/48705/
Cambon-Bonavita Marie-Anne, Pelleter Ewan, Fouquet Yves, Alix Anne-Sophie, Besson Florian, Roussel Erwan, Ybert Sebastien (2017). Rapport annuel sur les activités menées par l’Ifremer dans le cadre du contrat d'exploration des sulfures polymétalliques conclu, au nom de la France, avec l'Autorité Internationale des Fonds Marins (AIFM) - Période du 1er janvier au 31 décembre 2016. REM/2017-008 .
Ifremer (2017). Interface terre solide, océan profond et écosystèmes associés . Rapport du groupe 1a - Réflexion stratégique 2017-2018 .
Cruaud Perrine, Vigneron Adrien, Pignet Patricia, Caprais Jean-Claude, Lesongeur Francoise, Toffin Laurent, Godfroy Anne, Cambon-Bonavita Marie-Anne (2017). Comparative Study of Guaymas Basin Microbiomes: Cold Seeps vs. Hydrothermal Vents Sediments . Frontiers In Marine Science , 4(417), 1-15 . Publisher's official version : https://doi.org/10.3389/fmars.2017.00417 , Open Access version : https://archimer.ifremer.fr/doc/00415/52640/

2016

Brulport Jean-Pierre, Ybert Sebastien, Cambon-Bonavita Marie-Anne (2016). Cahier des charges - Modification et aménagement de conteneur pour un laboratoire de microbiologie . REM/EEP/LM2E 16-05 .
Auguste M., Mestre N. C., Rocha T. L., Cardoso C., Cueff-Gauchard Valerie, Le Bloa Simon, Cambon-Bonavita Marie-Anne, Shillito B., Zbinden M., Ravaux J., Bebianno M. J. (2016). Development of an ecotoxicological protocol for the deep-sea fauna using the hydrothermal vent shrimp Rimicaris exoculata . Aquatic Toxicology , 175, 277-285 . Publisher's official version : https://doi.org/10.1016/j.aquatox.2016.03.024 , Open Access version : https://archimer.ifremer.fr/doc/00323/43465/

2015

Hernandez-Avila Ivan, Cambon-Bonavita Marie-Anne, Pradillon Florence (2015). Morphology of First Zoeal Stage of Four Genera of Alvinocaridid Shrimps from Hydrothermal Vents and Cold Seeps: Implications for Ecology, Larval Biology and Phylogeny . Plos One , 10(12), - . Publisher's official version : https://doi.org/10.1371/journal.pone.0144657 , Open Access version : https://archimer.ifremer.fr/doc/00309/42011/
Durand Lucile, Roumagnac Marie, Cueff-Gauchard Valerie, Jan Cyrielle, Guri Mathieu, Tessier Claire, Haond Marine, Crassous Philippe, Zbinden Magali, Arnaud-Haond Sophie, Cambon-Bonavita Marie-Anne (2015). Biogeographical distribution of Rimicaris exoculata resident gut epibiont communities along the Mid-Atlantic Ridge hydrothermal vent sites . Fems Microbiology Ecology , 91(10), 1-15 . Publisher's official version : https://doi.org/10.1093/femsec/fiv101 , Open Access version : https://archimer.ifremer.fr/doc/00288/39890/
Cruaud Perrine, Vigneron Adrien, Pignet Patricia, Caprais Jean-Claude, Lesongeur Francoise, Toffin Laurent, Godfroy Anne, Cambon-Bonavita Marie-Anne (2015). Microbial communities associated with benthic faunal assemblages at cold seep sediments of the Sonora Margin, Guaymas Basin . Frontiers in Marine Science , 2(53), 1-16 . Publisher's official version : https://doi.org/10.3389/fmars.2015.00053 , Open Access version : https://archimer.ifremer.fr/doc/00288/39889/
Alcaide Maria, Tchigvintsev Anatoli, Martinez-Martinez Monica, Popovic Ana, Reva Oleg N., Lafraya Alvaro, Bargiela Rafael, Nechitaylo Taras Y., Matesanz Ruth, Cambon-Bonavita Marie-Anne, Jebbar Mohamed, Yakimov Michail M., Savchenko Alexei, Golyshina Olga V., Yakunin Alexander F., Golyshin Peter N., Ferrer Manuel (2015). Identification and Characterization of Carboxyl Esterases of Gill Chamber-Associated Microbiota in the Deep-Sea Shrimp Rimicaris exoculata by Using Functional Metagenomics . Applied And Environmental Microbiology , 81(6), 2125-2136 . Publisher's official version : https://doi.org/10.1128/AEM.03387-14 , Open Access version : https://archimer.ifremer.fr/doc/00256/36721/
Fouquet Yves, Alix Anne-Sophie, Birot Dominique, Cheron Sandrine, Charlou Jean-Luc, Donval Jean-Pierre, Etoubleau Joel, Germain Yoan, Guillou Martin, Guerin Charline, Guyader Vivien, Konn Cecile, Labanieh Shasa, Pelleter Ewan, Pierre Delphine, Dupre Stephanie, Scalabrin Carla, Cambon Marie-Anne, Menot Lenaick, Pradillon Florence, Chazot Gilles, Dyment Jerome, Szitkar Florent, Gouin Jerôme (2015). Discovery of Extensive Hydrothermal Fields in the Wallis and Futuna Back-Arc Environment (SW Pacific) . André-Mayer AS, Cathelineau M, Muchez Ph, Pirard E, Sindern S (eds) Mineral resources in a sustainable world. Proceedings of the 13th Biennial SGA Meeting, 24-27 August 2015, Nancy, France. Volume ? pp.1223-1226 .

2014

Vigneron Adrien, Cruaud Perrine, Pignet Patricia, Caprais Jean-Claude, Gayet Nicolas, Cambon-Bonavita Marie-Anne, Godfroy Anne, Toffin Laurent (2014). Bacterial communities and syntrophic associations involved in anaerobic oxidation of methane process of the Sonora Margin cold seeps, Guaymas Basin . Environmental Microbiology , 16(9), 2777-2790 . Publisher's official version : https://doi.org/10.1111/1462-2920.12324 , Open Access version : https://archimer.ifremer.fr/doc/00168/27921/
Jan Cyrielle, Petersen Jillian M., Werner Johannes, Teeling Hanno, Huang Sixing, Gloeckner Frank Oliver, Golyshina Olga V., Dubilier Nicole, Golyshin Peter N., Jebbar Mohamed, Cambon-Bonavita Marie-Anne (2014). The gill chamber epibiosis of deep-sea shrimp Rimicaris exoculata: an in-depth metagenomic investigation and discovery of Zetaproteobacteria . Environmental Microbiology , 16(9), 2723-2738 . Publisher's official version : https://doi.org/10.1111/1462-2920.12406 , Open Access version : https://archimer.ifremer.fr/doc/00177/28874/
Cruaud Perrine, Vigneron Adrien, Lucchetti-Miganeh Celine, Ciron Pierre Emmanuel, Godfroy Anne, Cambon-Bonavita Marie-Anne (2014). Influence of DNA Extraction Method, 16S rRNA Targeted Hypervariable Regions, and Sample Origin on Microbial Diversity Detected by 454 Pyrosequencing in Marine Chemosynthetic Ecosystems . Applied And Environmental Microbiology , 80(15), 4626-4639 . Publisher's official version : https://doi.org/10.1128/AEM.00592-14 , Open Access version : https://archimer.ifremer.fr/doc/00204/31495/

2013

Vigneron Adrien, Cruaud Perrine, Pignet Patricia, Caprais Jean-Claude, Cambon-Bonavita Marie-Anne, Godfroy Anne, Toffin Laurent (2013). Archaeal and anaerobic methane oxidizer communities in the Sonora Margin cold seeps, Guaymas Basin (Gulf of California) . Isme Journal , 7(8), 1595-1608 . https://doi.org/10.1038/ismej.2013.18
Ponsard Julie, Cambon-Bonavita Marie-Anne, Zbinden Magali, Lepoint Gilles, Joassin Andre, Corbari Laure, Shillito Bruce, Durand Lucile, Cueff-Gauchard Valerie, Compere Philippe (2013). Inorganic carbon fixation by chemosynthetic ectosymbionts and nutritional transfers to the hydrothermal vent host-shrimp Rimicaris exoculata . Isme Journal , 7(1), 96-109 . https://doi.org/10.1038/ismej.2012.87

2012

Guri Mathieu, Durand Lucile, Cueff-Gauchard Valerie, Zbinden Magali, Crassous Philippe, Shillito Bruce, Cambon-Bonavita Marie-Anne (2012). Acquisition of epibiotic bacteria along the life cycle of the hydrothermal shrimp Rimicaris exoculata . The ISME journal (Multidisciplinary Journal of Microbial Ecology) , 6(3), 597-609 . Publisher's official version : https://doi.org/10.1038/ismej.2011.133 , Open Access version : https://archimer.ifremer.fr/doc/00072/18318/
Corbari Laure, Durand Lucile, Cambon-Bonavita Marie-Anne, Gaill Francoise, Compere Philippe (2012). New digestive symbiosis in the hydrothermal vent amphipoda Ventiella sulfuris . Comptes Rendus Biologies , 335(2), 142-154 . https://doi.org/10.1016/j.crvi.2011.12.005

2011

Birrien Jean-Louis, Zeng Xiang, Jebbar Mohamed, Cambon-Bonavita Marie-Anne, Querellou Joel, Oger Philippe, Bienvenu Nadege, Xiao Xiang, Prieur Daniel (2011). Pyrococcus yayanosii sp nov., an obligate piezophilic hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent . International Journal Of Systematic And Evolutionary Microbiology , 61, 2827-2831 . https://doi.org/10.1099/ijs.0.024653-0
Roussel Erwan, Konn Cecile, Charlou Jean-Luc, Donval Jean-Pierre, Fouquet Yves, Querellou Joel, Prieur Daniel, Cambon-Bonavita Marie-Anne (2011). Comparison of microbial communities associated with three Atlantic ultramafic hydrothermal systems . Fems Microbiology Ecology , 77(3), 647-665 . Publisher's official version : https://doi.org/10.1111/j.1574-6941.2011.01161.x , Open Access version : https://archimer.ifremer.fr/doc/00067/17836/
Crepeau Valentin, Cambon-Bonavita Marie-Anne, Lesongeur Francoise, Randrianalivelo Henintsoa, Sarradin Pierre-Marie, Sarrazin Jozee, Godfroy Anne (2011). Diversity and function in microbial mats from the Lucky Strike hydrothermal vent field . Fems Microbiology Ecology , 76(3), 524-540 . https://doi.org/10.1111/j.1574-6941.2011.01070.x
Teixeira Sara, Cambon-Bonavita Marie-Anne, Serrao Ester A., Desbruyeres Daniel, Arnaud-Haond Sophie (2011). Recent population expansion and connectivity in the hydrothermal shrimp Rimicaris exoculata along the Mid-Atlantic Ridge . Journal Of Biogeography , 38(3), 564-574 . Publisher's official version : https://doi.org/10.1111/j.1365-2699.2010.02408.x , Open Access version : https://archimer.ifremer.fr/doc/00033/14394/

2010

Petersen Jillian M., Ramette Alban, Lott Christian, Cambon-Bonavita Marie-Anne, Zbinden Magali, Dubilier Nicole (2010). Dual symbiosis of the vent shrimp Rimicaris exoculata with filamentous gamma- and epsilonproteobacteria at four Mid-Atlantic Ridge hydrothermal vent fields . Environmental Microbiology , 12(8), 2204-2218 . https://doi.org/10.1111/j.1462-2920.2009.02129.x
Burgaud Gaetan, Arzur Danielle, Durand Lucile, Cambon-Bonavita Marie-Anne, Barbier Georges (2010). Marine culturable yeasts in deep-sea hydrothermal vents: species richness and association with fauna . Fems Microbiology Ecology , 73(1), 121-133 . Publisher's official version : https://doi.org/10.1111/j.1574-6941.2010.00881.x , Open Access version : https://archimer.ifremer.fr/doc/00006/11704/
Durand Lucile, Zbinden Magali, Cueff-Gauchard Valerie, Duperron Sebastien, Roussel Erwan, Shillito Bruce, Cambon-Bonavita Marie-Anne (2010). Microbial diversity associated with the hydrothermal shrimp Rimicaris exoculata gut and occurrence of a resident microbial community . Fems Microbiology Ecology , 71(2), 291-303 . Publisher's official version : https://doi.org/10.1111/j.1574-6941.2009.00806.x , Open Access version : https://archimer.ifremer.fr/doc/00000/11142/

2009

Cambon-Bonavita Marie-Anne, Nadalig Thierry, Roussel Erwan, Delage Eloise, Duperron Sebastien, Caprais Jean-Claude, Boetius A., Sibuet Myriam (2009). Diversity and distribution of methane-oxidizing microbial communities associated with different faunal assemblages in a giant pockmark of the Gabon continental margin . Deep Sea Research Part II: Topical Studies in Oceanography , 56(23), 2248-2258 . Publisher's official version : https://doi.org/10.1016/j.dsr2.2009.04.007 , Open Access version : https://archimer.ifremer.fr/doc/00000/7298/
Roussel Erwan, Sauvadet Anne-Laure, Chaduteau Carine, Fouquet Yves, Charlou Jean-Luc, Prieur Daniel, Cambon Marie-Anne (2009). Archaeal communities associated with shallow to deep subseafloor sediments of the New Caledonia Basin . Environmental Microbiology , 11(9), 2446-2462 . Publisher's official version : https://doi.org/10.1111/j.1462-2920.2009.01976.x , Open Access version : https://archimer.ifremer.fr/doc/00000/6801/
Zeng Xiang, Birrien Jean-Louis, Fouquet Yves, Cherkashov Georgy, Jebbar Mohamed, Querellou Joel, Oger Philippe, Cambon-Bonavita Marie-Anne, Xiao Xiang, Prieur Daniel (2009). Pyrococcus CH1, an obligate piezophilic hyperthermophile: extending the upper pressure-temperature limits for life . The ISME journal (Multidisciplinary Journal of Microbial Ecology) , 3(7), 873-876 . Publisher's official version : https://doi.org/10.1038/ismej.2009.21 , Open Access version : https://archimer.ifremer.fr/doc/00000/6812/
Alain Karine, Callac Nolwenn, Guegan Marianne, Lesongeur Francoise, Crassous Philippe, Cambon-Bonavita Marie-Anne, Querellou Joel, Prieur Daniel (2009). Nautilia abyssi sp nov., a thermophilic, chemolithoautotrophic, sulfur-reducing bacterium isolated from an East Pacific Rise hydrothermal vent . International journal of systematic and evolutionary microbiology , 59, 1310-1315 . Publisher's official version : https://doi.org/10.1099/ijs.0.005454-0 , Open Access version : https://archimer.ifremer.fr/doc/00000/6585/
Roussel Erwan, Sauvadet Anne Laure, Allard Jonathan, Chaduteau Carine, Richard Pierre, Cambon Bonavita Marie-Anne, Chaumillon Eric (2009). Archaeal Methane Cycling Communities Associated with Gassy Subsurface Sediments of Marennes-Oleron Bay (France) . Geomicrobiology Journal , 26(1), 31-43 . Publisher's official version : https://doi.org/10.1080/01490450802599284 , Open Access version : https://archimer.ifremer.fr/doc/00000/6165/

2008

Corbari L, Cambon-Bonavita Marie-Anne, Long G, Grandjean F, Zbinden M, Gaill F, Compere P (2008). Iron oxide deposits associated with the ectosymbiotic bacteria in the hydrothermal vent shrimp Rimicaris exoculata . Biogeosciences , 5(5), 1295-1310 . Publisher's official version : https://doi.org/10.5194/bg-5-1295-2008 , Open Access version : https://archimer.ifremer.fr/doc/00000/4702/
Roussel Erwan, Cambon-Bonavita Marie-Anne, Querellou Joel, Cragg B, Webster G, Prieur D, Parkes R (2008). Extending the sub-sea-floor biosphere . Science , 320(5879), 1046 . Publisher's official version : https://doi.org/10.1126/science.1154545 , Open Access version : https://archimer.ifremer.fr/doc/00000/4209/
Zbinden M, Shillito B, Le Bris Nadine, De Montlaur C, Roussel Erwan, Guyot F, Gaill F, Cambon-Bonavita Marie-Anne (2008). New insigths on the metabolic diversity among the epibiotic microbial communitiy of the hydrothermal shrimp Rimicaris exoculata . Journal of Experimental Marine Biology and Ecology , 359(2), 131-140 . Publisher's official version : https://doi.org/10.1016/j.jembe.2008.03.009 , Open Access version : https://archimer.ifremer.fr/doc/00000/4563/
Corbari Laure, Zbinden Magali, Cambon-Bonavita Marie-Anne, Gaill Françoise, Compere Philippe (2008). Bacterial symbionts and mineral deposits in the branchial chamber of the hydrothermal vent shrimp Rimicaris exoculata: relationship to moult cycle . Aquatic Biology , 1, 225-238 . Publisher's official version : https://doi.org/10.3354/ab00024 , Open Access version : https://archimer.ifremer.fr/doc/00000/4626/

2007

Gaill Françoise, Ballu V., Cannat M., Crawford W., Dyment J., Escartin J., Fouquet Yves, Goslin J., Reverdin G., Sarradin Pierre-Marie, Tarits P., Andreani M., Bonnivard E., Bucas Karenn, Burgaud G., Cambon-Bonavita Marie-Anne, Cueff Valerie, Durand C., Gros O., Hamel G., Henriques M., Hois E., Ildefonse B., Konn Cecile, Le Bris Nadine, Le Guyader H., Ravaux J., Shilito B., Toullec J.Y., Zbinden M. (2007). Cruise MoMARDREAM-Naut and other MoMAR experiments at Rainbow and Lucky Strike in Summer 2007 . InterRidge News , 16, 15-16 . Open Access version : https://archimer.ifremer.fr/doc/00385/49650/

2006

Moussard Hélène, Corre Erwan, Cambon-Bonavita Marie-Anne, Fouquet Yves, Jeanthon Christian (2006). Novel uncultured Epsilonproteobacteria dominate a filamentous sulphur mat from the 13 degrees N hydrothermal vent field, East Pacific Rise . FEMS Microbiology Ecology , 58(3), 449-463 . Publisher's official version : https://doi.org/10.1111/j.1574-6941.2006.00192.x , Open Access version : https://archimer.ifremer.fr/doc/00000/2110/
Moussard Helene, Moreira David, Cambon-Bonavita Marie-Anne, Lopez Garcia Purificacion, Jeanthon Christian (2006). Uncultured Archaea in a hydrothermal microbial assemblage: phylogenetic diversity and characterization of a genome fragment from a euryarchaeote . FEMS Microbiology Ecology , 57(3), 452-469 . https://doi.org/10.1111/j.1574-6941.2006.00128.x

2004

Alain Karine, Zbinden M, Le Bris Nadine, Lesongeur Francoise, Querellou Joel, Gaill F, Cambon-Bonavita Marie-Anne (2004). Early steps in microbial colonization processes at deep-sea hydrothermal vents . Environmental Microbiology , 6(3), 227-241 . https://doi.org/10.1111/j.1462-2920.2003.00557.x
Jollivet D., Lallier F.-H., Barnay A.-S., Bienvenu N., Bonnivard E., Briand P., Cambon Bonavita Marie-Anne, Comtet T., Cosson R., Daguin C., Donval Jean-Pierre, Faure B., Gaillard M., Glippa V., Guillou L., Hourdez S., Le Bris N., Morand S., Pradillon F., Rees J.-F., Segonzac Michel, Shillito B., Thiebaut E., Viard F. (2004). The BIOSPEEDO cruise: a new survey of hydrothermal vents along the South East Pacific Rise from 7°24'S to 21°33'S . InterRidge News , (13), 20-26 .
Sarradin Pierre-Marie, Sarrazin Jozee, Cadiou Jean-Francois, Olu Karine, Desbruyeres Damien, Rigaud Vincent, Drogou Jean-Francois, Lecornu Fabrice, Rolin Jean-Francois, Vuillemin Renaud, Cambon-Bonavita Marie-Anne, Sauter E, Von Juterzenka K, Boetius A, Santos Rs, Colaco Ana, Pascoal A, Oliveira Paulo, Shillito Bruce, Zal F, Schultz A, Taylor P, Lane D, Loke Rob, Du Buf H, Waldmann C, Cormack A, Sanfilippo L, Masson M (2004). EXtreme ecosystem studies in the deep OCEan: Technological Developments. EXOCET/D . Proceedings Of The Fourteenth (2004) International Offshore And Polar Engineering Conference, Vol 1 , 738-745 . Open Access version : https://archimer.ifremer.fr/doc/00000/3600/

2003

Alain Karine, Rolland Sophie, Crassous Philippe, Lesongeur Francoise, Zbinden Magali, Le Gall Christian, Godfroy Anne, Page Antoine, Juniper S Kim, Cambon-Bonavita Marie-Anne, Duchiron Francis, Querellou Joel, Alain Karine, Rolland Sophie, Crassous Philippe, Lesongeur Francoise, Zbinden Magali, Le Gall Christian, Godfroy Anne, Page Antoine, Juniper S Kim, Cambon-Bonavita Marie-Anne, Duchiron Francis, Querellou Joel (2003). Desulfurobacterium crinifex sp.nov., a novel thermophilic, pinkish-streamer forming, chemolithoautotrophic bacterium isolated from a Juan de Fuca Ridge hydrothermal vent and amendment of the genus Desulfurobacterium . Extremophiles , 7(5), 361-370 . Publisher's official version : https://doi.org/10.1007/s00792-003-0329-4 , Open Access version : https://archimer.ifremer.fr/doc/00000/663/
Zbinden Magali, Cambon-Bonavita Marie-Anne (2003). Occurrence of Deferribacterales and Entomoplasmatales in the deep-sea Alvinocarid shrimp Rimicaris exoculata gut . FEMS Microbiology Ecology , 46(1), 23-30 . Publisher's official version : https://doi.org/10.1016/S0168-6496(03)00176-4 , Open Access version : https://archimer.ifremer.fr/doc/00000/778/
Cambon-Bonavita Marie-Anne, Lesongeur Francoise, Pignet Patricia, Wery Nathalie, Lambert Christian, Godfroy Anne, Querellou Joel, Barbier Georges (2003). Thermococcus atlanticus sp. nov., a hyperthermophilic Archaeon isolated from a deep-sea hydrothermal vent in the Mid-Atlantic Ridge (vol 7, pg 101, 2003) . Extremophiles , 7(4), 339-339 . https://doi.org/10.1007/s00792-003-0343-6
Raguenes Gerard, Cambon-Bonavita Marie-Anne, Lohier Jean-Francois, Boisset Claire, Guezennec Jean (2003). A novel, highly viscous polysaccharide excreted by an Alteromonas isolated from a deep-sea hydrothermal vent shrimp . Current Microbiology , 46(6), 448-452 . https://doi.org/10.1007/s00284-002-3922-3
Cambon-Bonavita Marie-Anne, Lesongeur Francoise, Pignet Patricia, Wery Nathalie, Lambert Christian, Godfroy Anne, Querellou Joel, Barbier Georges (2003). Extremophiles, Thermophily section, species description Thermococcus atlanticas sp nov., a hyperthermophilic Archaeon isolated from a deep-sea hydrothermal vent in the Mid-Atlantic Ridge . Extremophiles , 7(2), 101-109 . https://doi.org/10.1007/s00792-002-0301-8

2002

Alain Karine, Olagnon Michel, Desbruyeres Daniel, Page Antoine, Barbier Georges, Juniper Kim, Querellou Joel, Cambon-Bonavita Marie-Anne, Alain Karine, Olagnon Michel, Desbruyeres Daniel, Page Antoine, Barbier Georges, Juniper Kim, Querellou Joel, Cambon-Bonavita Marie-Anne (2002). Phylogenetic characterization of the bacterial assemblage associated with mucous. secretions of the hydrothermal vent polychaete Paralvinella palmiformis . FEMS Microbiology Ecology , 42(3), 463-476 . Open Access version : https://archimer.ifremer.fr/doc/00000/661/
Guillou Laure, Nezan Elisabeth, Cueff Valerie, Erard-Le Denn Evelyne, Cambon-Bonavita Marie-Anne, Gentien Patrick, Barbier Georges (2002). Genetic diversity and molecular detection of three toxic dinoflagellate genera (Alexandrium, Dinophysis, and Karenia) from French coasts . Protist , 153(3), 223-238 . https://doi.org/10.1078/1434-4610-00100
Wery Nathalie, Cambon-Bonavita Marie-Anne, Lesongeur Francoise, Barbier Georges (2002). Diversity of anaerobic heterotrophic thermophiles isolated from deep-sea hydrothermal vents of the Mid-Atlantic Ridge . Fems Microbiology Ecology , 41(2), 105-114 . https://doi.org/10.1111/j.1574-6941.2002.tb00971.x
Alain Karine, Querellou Joel, Lesongeur Francoise, Pignet Patricia, Crassous Philippe, Raguenes Gerard, Cueff Valerie, Cambon-Bonavita Marie-Anne, Alain Karine, Querellou Joel, Lesongeur Francoise, Pignet Patricia, Crassous Philippe, Raguenes Gerard, Cueff Valerie, Cambon-Bonavita Marie-Anne (2002). Caminibacter hydrogeniphilus gen. nov., sp nov., a novel thermophilic, hydrogen-oxidizing bacterium isolated from an East Pacific Rise hydrothermal vent . International Journal Of Systematic And Evolutionary Microbiology , 52, 1317-1323 . https://doi.org/10.1099/ijs.0.02195-0
Nadalig Thierry, Caprais Jean-Claude, Lôsekann T, Cambon-Bonavita Marie-Anne, Knittel K, Olu Karine, Boetius A, Sibuet Myriam (2002). Structure and diversity of microbial communities at two methane seep sites (Gulf of Guinea) . Geochimica et Cosmochimica Acta , 66(Suppl.1), 543 .
Cambon-Bonavita Marie-Anne, Raguenes Gerard, Jean Joelle, Vincent Pascal, Guezennec Jean (2002). A novel polymer produced by a bacterium isolated from a deep-sea hydrothermal vent polychaete annelid . Journal Of Applied Microbiology , 93(2), 310-315 . https://doi.org/10.1046/j.1365-2672.2002.01689.x
Alain Karine, Pignet Patricia, Zbinden M, Quillevere M, Duchiron F, Donval Jean-Pierre, Lesongeur Francoise, Raguenes Gerard, Crassous Philippe, Querellou Joel, Cambon-Bonavita Marie-Anne (2002). Caminicella sporogenes gen. nov., sp nov., a novel thermophilic spore-forming bacterium isolated from an East-Pacific Rise hydrothermal vent . International journal of systematic and evolutionary microbiology , 52, 1621-1628 . Publisher's official version : https://doi.org/10.1099/ijs.0.02142-0 , Open Access version : https://archimer.ifremer.fr/doc/00000/528/

2001

Querellou Joel, Alain Karine, Cambon-Bonavita Marie-Anne (2001). Thermophiles from deep-sea hydrothermal vents . Vie Et Milieu Life And Environment , 51(4), 161-172 .
Cambon-Bonavita Marie-Anne, Lesongeur Francoise, Menoux S, Lebourg Arnaud, Barbier Georges (2001). Microbial diversity in smoked salmon examined by a culture-independent molecular approach - a preliminary study . International Journal Of Food Microbiology , 70(1-2), 179-187 . https://doi.org/10.1016/S0168-1605(01)00539-6
Wery Nathalie, Moricet Jean-Marc, Cueff Valerie, Jean Joelle, Pignet Patricia, Lesongeur Francoise, Cambon-Bonavita Marie-Anne, Barbier Georges (2001). Caloranaerobacter azorensis gen. nov., sp nov., an anaerobic thermophilic bacterium isolated from a deep-sea hydrothermal vent . International journal of systematic and evolutionary microbiology , 51, 1789-1796 . Open Access version : https://archimer.ifremer.fr/doc/00000/586/
Zbinden M, Martinez I, Guyot F, Cambon-Bonavita Marie-Anne, Gaill F, Zbinden M, Martinez I, Guyot F, Cambon-Bonavita Marie-Anne, Gaill F (2001). Zinc-iron sulphide mineralization in tubes of hydrothermal vent worms . European Journal Of Mineralogy , 13(4), 653-658 . https://doi.org/10.1127/0935-1221/2001/0013-0653
Wery Nathalie, Lesongeur Francoise, Pignet Patricia, Derennes Veronique, Cambon-Bonavita Marie-Anne, Godfroy Anne, Barbier Georges (2001). Marinitoga camini gen, nov., sp nov., a rod-shaped bacterium belonging to the order Thermotogales, isolated from a deep-sea hydrothermal vent . International journal of systematic and evolutionary microbiology , 51, 495-504 . Open Access version : https://archimer.ifremer.fr/doc/00000/587/

2000

Cambon-Bonavita Marie-Anne, Schmitt P, Zieger M, Flaman Jm, Lesongeur Francoise, Raguenes Gerard, Bindel D, Frisch N, Lakkis Z, Dupret D, Barbier Georges, Querellou Joel (2000). Cloning, expression, and characterization of DNA polymerase I from the hyperthermophilic archaea Thermococcus fumicolans . Extremophiles , 4(4), 215-225 . https://doi.org/10.1007/PL00010714
Roussot Odile, Cambon Bonavita Marie-Anne, Robert Rene, Barbier Georges (2000). Molecular characterisation of microalgae used as food in mariculture industry . IMBC'2000, 29/09-04/10/2000, Townsville, Australia .

1999

Barbier Georges, Godfroy Anne, Meunier Jean-Roch, Querellou Joel, Cambon Marie-Anne, Lesongeur Francoise, Grimont Pad, Raguenes Gerard (1999). Pyrococcus glycovorans sp nov., a hyperthermophilic archaeon isolated from the East Pacific Rise . International Journal Of Systematic Bacteriology , 49, 1829-1837 .


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