Mouret Aurélia, Choquel Constance, Thibault De Chanvalon Aubin, Cesbron Florian, Jauffrais Thierry, Jézéquel Didier, Launeau Patrick, Barbe Anthony, Levrard Romain, Nicol Alan, Charbonnier Céline, Metzger Edouard (2024). Two-dimensional determination of dissolved manganese in sediment porewaters . Marine Chemistry , 267, 104454 (10p.) . Publisher's official version : https://doi.org/10.1016/j.marchem.2024.104454 , Open Access version : https://archimer.ifremer.fr/doc/00908/102034/

Plouviez Maxence, Guieysse Benoit, Wolmarans Karla, Matinong Andrea Marie E., Buwalda Olivia, Thånell Karina, Beinik Igor, Tuyishime J. R. Marius, Mitchell Valerie, Kappen Peter, Flynn David, Jauffrais Thierry, Haverkamp Richard G. . Microalgae for the Extraction and Separation of Rare Earths: An STXM Study of Ce, Gd, and P . ACS Sustainable Resource Management IN PRESS . Publisher's official version : https://doi.org/10.1021/acssusresmgt.4c00237 , Open Access version : https://archimer.ifremer.fr/doc/00915/102712/

Denis Hugo, Selmoni Oliver, Gossuin Hugues, Jauffrais Thierry, Butler Caleb C., Lecellier Gaël, Berteaux-Lecellier Véronique (2024). Climate adaptive loci revealed by seascape genomics correlate with phenotypic variation in heat tolerance of the coral Acropora millepora . Scientific Reports , 14(1), 22179 (15p.) . Publisher's official version : https://doi.org/10.1038/s41598-024-67971-1 , Open Access version : https://archimer.ifremer.fr/doc/00911/102329/

Lasalo Malia, Jauffrais Thierry, Georgel Philippe, Matsui Mariko (2024). Marine Microorganism Molecules as Potential Anti-Inflammatory Therapeutics . Marine Drugs , 22(9), 405 (35p.) . Publisher's official version : https://doi.org/10.3390/md22090405 , Open Access version : https://archimer.ifremer.fr/doc/00906/101787/

Van Wynsberge Simon, Antypas Florence, Brisset Maele, Desnues Anne, Jamet Léocadie, Lagourgue Laura, Payri Claude, Jauffrais Thierry, Lemonnier Hugues (2024). A new set of N isotopic reference values for monitoring Ulva green tides in coral reef ecosystems . Marine Pollution Bulletin , 200, 116152 (10p.) . Publisher's official version : https://doi.org/10.1016/j.marpolbul.2024.116152 , Open Access version : https://archimer.ifremer.fr/doc/00878/98966/

Meriot V., Roussel Amelie, Brunet N., Chomerat Nicolas, Bilien Gwenael, Le Déan Loic, Berteaux-Lecellier V., Coulombier N., Lebouvier N., Jauffrais Thierry (2024). Heterocapsa cf. bohaiensis (dinoflagellate): identification and response to nickel and iron stress revealed through chlorophyll a fluorescence . Photosynthetica , 62(1), 27-39 . Publisher's official version : https://doi.org/10.32615/ps.2023.038 , Open Access version : https://archimer.ifremer.fr/doc/00869/98122/

Jesus Bruno, Jauffrais Thierry, Trampe Erik, Méléder Vona, Ribeiro Lourenço, Bernhard Joan M., Geslin Emmanuelle, Kühl Michael (2023). Microscale imaging sheds light on species‐specific strategies for photo‐regulation and photo‐acclimation of microphytobenthic diatoms . Environmental Microbiology , 25(12), 3087-3103 . Publisher's official version : https://doi.org/10.1111/1462-2920.16499 , Open Access version : https://archimer.ifremer.fr/doc/00853/96459/

Sibat Manoella, Mai Tepoerau, Tanniou Simon, Biegala Isabelle, Hess Philipp, Jauffrais Thierry (2023). Seasonal Single-Site Sampling Reveals Large Diversity of Marine Algal Toxins in Coastal Waters and Shellfish of New Caledonia (Southwestern Pacific) . Toxins , 15(11), 642 (16p.) . Publisher's official version : https://doi.org/10.3390/toxins15110642 , Open Access version : https://archimer.ifremer.fr/doc/00859/97050/

Roussel Alice, Mériot Vincent, Jauffrais Thierry, Berteaux-Lecellier Véronique, Lebouvier Nicolas (2023). OMICS Approaches to Assess Dinoflagellate Responses to Chemical Stressors . Biology-basel , 12(9), 1234 (11p.) . Publisher's official version : https://doi.org/10.3390/biology12091234 , Open Access version : https://archimer.ifremer.fr/doc/00853/96531/

Evrard Andréa, Schaefer Anne-Lou, Bruyère Oriane, Van Wynsberge Simon, Soulard Benoit, Lemonnier Hugues, Jauffrais Thierry, Le Gendre Romain (2023). Découpage de l'espace marin en masses d'eau homogènes : une analyse de sensibilité aux paramètres de découpage, appliquée au Parc Naturel de la Mer de Corail, Nouvelle-Calédonie . Projet PRESENCE . https://archimer.ifremer.fr/doc/00834/94553/

Brisset Maele, Lagourgue Laura, Antypas Florence, Chauveau Mathilde, Schaefer Anne-Lou, Lalau Noemie, Lopez Etienne, Gobin Siloë, Vandenberghe Sylvette, Bourassin Emmanuel, Bruyère Oriane, Majorel Clarisse, Bonneville Claire, Brouquier Armelle, Millet Laurent, Desnues Anne, Gérard Philippe, Jamet Léocadie, Andréfouët Serge, Coutures Emmanuel, Tessier Emmanuel, Soulard Benoit, Petton Sébastien, Jauffrais Thierry, Mardhel Vincent, Le Gendre Romain, Lemonnier Hugues, Payri Claude, Van Wynsberge Simon (2023). Echouages d'algues vertes à Poé-Gouaro-Déva: Identification des causes et développement d'outils d'aide à la décision . Rapport final du projet ELADE, Ifremer-IRD-BRGM-La Province Sud, Nouméa, 239 pp. https://doi.org/10.13155/93985

Collectif CRESICA (Consortium pour la recherche, l’enseignement supérieur et l’innovation en Nouvelle-Calédonie) (2023). Au fil de l'eau. Quel bilan après 3 années supplémentaires de recherche sur la thématique de l'eau en Nouvelle-Calédonie ? Phase 2 . Brochure .

Meriot Vincent, Herbette Gaetan, Garayev Elnur, Coulombier Noémie, Le Dean Loic, Jauffrais Thierry, Lebouvier Nicolas (2023). Targeted and non-targeted metabolomic analyses of Heterocapsa cf. bohaiensis under nickel and iron high concentration and its photophysiology . EPC 2023 - 8th European Phycological Congress /8ème Congrès Phycologique Européen “Opportunités scientifiques pour une révolution globale dans le domaine des Algues”. 20-26 August 2023, Brest, France . https://archimer.ifremer.fr/doc/00854/96619/

Schweizer Magali, Jauffrais Thierry, Choquel Constance, Méléder Vona, Quinchard Sophie, Geslin Emmanuelle (2022). Trophic strategies of intertidal foraminifera explored with single-cell microbiome metabarcoding and morphological methods: What is on the menu? Ecology And Evolution , 12(11), e9437 (28p.) . Publisher's official version : https://doi.org/10.1002/ece3.9437 , Open Access version : https://archimer.ifremer.fr/doc/00804/91624/

Scherrer Romane, Quiniou Thomas, Jauffrais Thierry, Lemonnier Hugues, Bonnet Sophie, Selmaoui-Folcher Nazha (2022). Holographic reconstruction enhancement via unpaired image-to-image translation . Applied Optics , 61(33), 9807-9816 . Publisher's official version : https://doi.org/10.1364/AO.471131 , Open Access version : https://archimer.ifremer.fr/doc/00804/91576/

Denis Hugo, Selmoni Oliver, Gossuin Hugues, Jauffrais Thierry, Lecellier Gaël, Berteaux-Lecellier Véronique (2022). Screening for climate adaptative loci using seascape genomics resolves phenotypic variation in heat tolerance of the coral Acropora millepora. Preprint , (Version 1) . Publisher's official version : https://doi.org/10.21203/rs.3.rs-2173184/v1 , Open Access version : https://archimer.ifremer.fr/doc/00800/91230/

Lagourgue L., Gobin S., Brisset Maele, Vandenberghe Sylvette, Bonneville C., Jauffrais Thierry, Van Wynsberge Simon, Payri C.E. (2022). Ten new species of Ulva (Ulvophyceae, Chlorophyta) discovered in New Caledonia: genetic and morphological diversity, and bloom potential . European Journal Of Phycology , 57(4), 458-478 . Publisher's official version : https://doi.org/10.1080/09670262.2022.2027023 , Open Access version : https://archimer.ifremer.fr/doc/00752/86394/

Lekieffre Charlotte, Jauffrais Thierry, Bernhard Joan M., Filipsson Helena L., Schmidt Christiane, Roberge Hélène, Maire Olivier, Panieri Giuliana, Geslin Emmanuelle, Meibom Anders (2022). Ammonium and Sulfate Assimilation Is Widespread in Benthic Foraminifera . Frontiers In Marine Science , 9, 861945 (10p.) . Publisher's official version : https://doi.org/10.3389/fmars.2022.861945 , Open Access version : https://archimer.ifremer.fr/doc/00785/89736/

Jauffrais Thierry, Brisset Maele, Lagourgue Laura, Payri Claude E., Gobin Siloë, Le Gendre Romain, Van Wynsberge Simon (2022). Seasonal changes in the photophysiology of Ulva batuffolosa in a coastal barrier reef . Aquatic Botany , 179, 103515 (9p.) . Publisher's official version : https://doi.org/10.1016/j.aquabot.2022.103515 , Open Access version : https://archimer.ifremer.fr/doc/00755/86661/

Jesus Bruno, Jauffrais Thierry, Trampe Erik C. L., Goessling Johannes W., Lekieffre Charlotte, Meibom Anders, Kühl Michael, Geslin Emmanuelle (2022). Kleptoplast distribution, photosynthetic efficiency and sequestration mechanisms in intertidal benthic foraminifera . Isme Journal , 16(3), 822-832 . Publisher's official version : https://doi.org/10.1038/s41396-021-01128-0 , Open Access version : https://archimer.ifremer.fr/doc/00728/83992/

Scherrer Romane, Govan Rodrigue, Quiniou Thomas, Jauffrais Thierry, Lemonnier Hugues, Bonnet Sophie, Selmaoui-Folcher Nazha (2022). Real-Time Automatic Plankton Detection, Tracking and Classification on Raw Hologram . CIBB 2021: Computational Intelligence Methods for Bioinformatics and Biostatistics proceedings. Part of the Lecture Notes in Computer Science book series (LNBI,volume 13483). Springer, Cham. pp 25–39 . https://archimer.ifremer.fr/doc/00807/91900/

Coulombier Noémie, Jauffrais Thierry, Lebouvier Nicolas (2021). Antioxidant Compounds from Microalgae: A Review . Marine Drugs , 19(10), 549 (30p.) . Publisher's official version : https://doi.org/10.3390/md19100549 , Open Access version : https://archimer.ifremer.fr/doc/00725/83671/

Choquel Constance, Geslin Emmanuelle, Metzger Edouard, Filipsson Helena L., Risgaard-Petersen Nils, Launeau Patrick, Giraud Manuel, Jauffrais Thierry, Jesus Bruno, Mouret Aurélia (2021). Denitrification by benthic foraminifera and their contribution to N-loss from a fjord environment . Biogeosciences , 18(1), 327-341 . Publisher's official version : https://doi.org/10.5194/bg-18-327-2021 , Open Access version : https://archimer.ifremer.fr/doc/00643/75482/

Coulombier Noémie, Blanchier Paul, Le Dean Loic, Barthelemy Vanille, Lebouvier Nicolas, Jauffrais Thierry (2021). The effects of CO2-induced acidification on Tetraselmis biomass production, photophysiology and antioxidant activity: a comparison using batch and continuous culture . Journal Of Biotechnology , 325, 312-324 . Publisher's official version : https://doi.org/10.1016/j.jbiotec.2020.10.005 , Open Access version : https://archimer.ifremer.fr/doc/00653/76555/

Scherrer Romane, Govan Rodrigue, Quiniou Thomas, Jauffrais Thierry, Lemonnier Hugues, Bonnet Sophie, Selmaoui-Folcher Nazha (2021). Automatic Plankton Detection and Classification on Raw Hologram with a Single Deep Learning Architecture . Proceedings of the CIBB 2021.In press .

Bird Clare, Lekieffre Charlotte, Jauffrais Thierry, Meibom Anders, Geslin Emmanuelle, Filipsson Helena L., Maire Olivier, Russell Ann D., Fehrenbacher Jennifer S. (2020). Heterotrophic Foraminifera Capable of Inorganic Nitrogen Assimilation . Frontiers In Microbiology , 11, 604979 (13p.) . Publisher's official version : https://doi.org/10.3389/fmicb.2020.604979 , Open Access version : https://archimer.ifremer.fr/doc/00662/77421/

Coulombier Noémie, Nicolau Elodie, Le Déan Loic, Barthelemy Vanille, Schreiber Nathalie, Brun Pierre, Lebouvier Nicolas, Jauffrais Thierry (2020). Effects of Nitrogen Availability on the Antioxidant Activity and Carotenoid Content of the Microalgae Nephroselmis sp . Marine Drugs , 18(9), 453 (22p.) . Publisher's official version : https://doi.org/10.3390/md18090453 , Open Access version : https://archimer.ifremer.fr/doc/00645/75699/

Coulombier Noémie, Nicolau Elodie, Le Déan Loic, Antheaume Cyril, Jauffrais Thierry, Lebouvier Nicolas (2020). Impact of Light Intensity on Antioxidant Activity of Tropical Microalgae . Marine Drugs , 18(2), 122 (18p.) . Publisher's official version : https://doi.org/10.3390/md18020122 , Open Access version : https://archimer.ifremer.fr/doc/00609/72152/

Menguy Eva, Dumontet Vincent, Coulombier Noémie, Meriot Vincent, Le Dean Loic, Barthelemy Vanille, Jauffrais Thierry (2020). A method to assess algicidal activity of microalgal extracts coupling microalgae produced in stirred closed photobioreactor operating in continuous with pulse amplitude modulated (PAM) fluorometry . Methodsx , 7, 101037 (8p.) . Publisher's official version : https://doi.org/10.1016/j.mex.2020.101037 , Open Access version : https://archimer.ifremer.fr/doc/00643/75524/

Jauffrais Thierry, Lekieffre Charlotte, Schweizer Magali, Jesus Bruno, Metzger Edouard, Geslin Emmanuelle (2019). Response of a kleptoplastidic foraminifer to heterotrophic starvation: photosynthesis and lipid droplet biogenesis . Fems Microbiology Ecology , 95(5), fiz046 (14p.) . Publisher's official version : https://doi.org/10.1093/femsec/fiz046 , Open Access version : https://archimer.ifremer.fr/doc/00487/59894/

Metzger Edouard, Barbe Anthony, Cesbron Florian, Thibault De Chanvalon Aubin, Jauffrais Thierry, Jézéquel Didier, Mouret Aurélia (2019). Two-dimensional ammonium distribution in sediment pore waters using a new colorimetric diffusive equilibration in thin-film technique . Water Research X , 2, 100023 (10p.) . Publisher's official version : https://doi.org/10.1016/j.wroa.2018.100023 , Open Access version : https://archimer.ifremer.fr/doc/00474/58557/

Jauffrais Thierry, Lekieffre Charlotte, Schweizer Magali, Geslin Emmanuelle, Metzger Edouard, Bernhard Joan M., Jesus Bruno, Filipsson Helena L., Maire Olivier, Meibom Anders (2019). Kleptoplastidic benthic foraminifera from aphotic habitats: Insights into assimilation of inorganic C, N, and S studied with sub-cellular resolution . Environmental Microbiology , 21(1), 125-141 . Publisher's official version : https://doi.org/10.1111/1462-2920.14433 , Open Access version : https://archimer.ifremer.fr/doc/00460/57188/

Payri Claude E., Vidal Eric, (dir.) (2019). Biodiversité en Océanie, un besoin urgent d’action, Nouméa 2019 . Presses universitaires de la Nouvelle‑Calédonie (PUNC).

Lekieffre Charlotte, Jauffrais Thierry, Geslin Emmanuelle, Jesus Bruno, Bernhard Joan M., Giovani Maria-Evangelia, Meibom Anders (2018). Inorganic carbon and nitrogen assimilation in cellular compartments of a benthic kleptoplastic foraminifer . Scientific Reports , 8(10140), 12p. Publisher's official version : https://doi.org/10.1038/s41598-018-28455-1 , Open Access version : https://archimer.ifremer.fr/doc/00457/56887/

Jauffrais Thierry, Lekieffre Charlotte, Koho Karoliina A., Tsuchiya Masashi, Schweizer Magali, Bernhard Joan M., Meibom Anders, Geslin Emmanuelle (2018). Ultrastructure and distribution of kleptoplasts in benthic foraminifera from shallow-water (photic) habitats . Marine Micropaleontology , 138, 46-62 . Publisher's official version : https://doi.org/10.1016/j.marmicro.2017.10.003 , Open Access version : https://archimer.ifremer.fr/doc/00457/56889/

Jauffrais Thierry, Agogue Helene, Gemin Marin-Pierre, Beaugeard Laureen, Martin-Jezequel Veronique (2017). Effect of bacteria on growth and biochemical composition of two benthic diatoms Halamphora coffeaeformis and Entomoneis paludosa . Journal Of Experimental Marine Biology And Ecology , 495, 65-74 . https://doi.org/10.1016/j.jembe.2017.06.004

Cesbron Florian, Geslin Emmanuelle, Le Kieffre Charlotte, Jauffrais Thierry, Nardelli Maria P., Langlet Dewi, Mabilleau Guillaume, Jorissen Frans J., Jezequel Didier, Metzger Edouard (2017). Sequestered chloroplasts in the benthic foraminifer haynesina germanica: cellular organization, oxygen fluxes and potential ecological implications . Journal Of Foraminiferal Research , 47(3), 268-278 .

Jauffrais Thierry, Jesus Bruno, Meleder Vona, Geslin Emmanuelle (2017). Functional xanthophyll cycle and pigment content of a kleptoplastic benthic foraminifer: Haynesina germanica . Plos One , 12(2), 15p. Publisher's official version : https://doi.org/10.1371/journal.pone.0172678 , Open Access version : https://archimer.ifremer.fr/doc/00457/56895/

Jauffrais Thierry, Jesus Bruno, Geslin Emmanuelle, Briand Floriane, Martin-Jezequel Veronique (2016). Locomotion speed of the benthic foraminifer Ammonia tepida exposed to different nitrogen and carbon sources . Journal Of Sea Research , 118, 52-58 . https://doi.org/10.1016/j.seares.2016.07.001

Jauffrais Thierry, Jesus Bruno, Meleder Vona, Turpin Vincent, D'Amaral P. G. Russo Arnaldo, Raimbault Patrick, Martin-Jezequel Veronique (2016). Physiological and photophysiological responses of the benthic diatom Entomoneis paludosa (Bacillariophyceae) to dissolved inorganic and organic nitrogen in culture . Marine Biology , 163(5), - . https://doi.org/10.1007/s00227-016-2888-9

Jauffrais Thierry, Jesus Bruno, Metzger Edouard, Mouget Jean-Luc, Jorissen Frans, Geslin Emmanuelle (2016). Effect of light on photosynthetic efficiency of sequestered chloroplasts in intertidal benthic foraminifera (Haynesina germanica and Ammonia tepida) . Biogeosciences , 13(9), 2715-2726 . Publisher's official version : https://doi.org/10.5194/bg-13-2715-2016 , Open Access version : https://archimer.ifremer.fr/doc/00457/56899/

Martin-Jezequel Veronique, Calu Guillaume, Candela Leo, Amzil Zouher, Jauffrais Thierry, Sechet Veronique, Weigel Pierre (2015). Effects of Organic and Inorganic Nitrogen on the Growth and Production of Domoic Acid by Pseudo-nitzschia multiseries and P. australis (Bacillariophyceae) in Culture . Marine Drugs , 13(12), 7067-7086 . Publisher's official version : https://doi.org/10.3390/md13127055 , Open Access version : https://archimer.ifremer.fr/doc/00308/41912/

Jauffrais Thierry, Drouet Sigrid, Turpin Vincent, Meleder Vona, Jesus Bruno, Cognie Bruno, Raimbault Patrick, Cosson Richard P., Decottignies Priscilla, Martin-Jezequel Veronique (2015). Growth and biochemical composition of a microphytobenthic diatom (Entomoneis paludosa) exposed to shorebird (Calidris alpina) droppings . Journal Of Experimental Marine Biology And Ecology , 469, 83-92 . https://doi.org/10.1016/j.jembe.2015.04.014

Kilcoyne Jane, Nulty Ciara, Jauffrais Thierry, McCarron Pearse, Herve Fabienne, Foley Barry, Rise Frode, Crain Sheila, Wilkins Alistair L., Twiner Michael J., Hess Philipp, Miles Christopher O. (2014). Isolation, Structure Elucidation, Relative LC-MS Response, and in Vitro Toxicity of Azaspiracids from the Dinoflagellate Azadinium spinosum . Journal Of Natural Products , 77(11), 2465-2474 . Publisher's official version : https://doi.org/10.1021/np500555k , Open Access version : https://archimer.ifremer.fr/doc/00245/35606/

Jauffrais Thierry, Sechet Veronique, Truquet Philippe, Amzil Zouher, Herrenknecht Christine, Hess Philipp (2014). Effect of Dilution Rate on Azadinium spinosum and Azaspiracid (AZA) Production in Pilot Scale Photobioreactors for the Harvest of AZA1 and -2 . In Molluscan Shellfish Safety : Proceedings of the 8th ICMSS, Charlottetown, PEI, Canada, June 12–17, 2011. Gilbert Sauvé (Ed.). ISBN: 978-94-007-6587-0. Chap.17, pp.197-204 (Springer Netherlands) . https://archimer.ifremer.fr/doc/00152/26349/

Kilcoyne Jane, Jauffrais Thierry, Twiner Michael J., Doucette Gregory J., Aasen Bunaes John A, Sosa Sylvio, Krock Bernd, Sechet Veronique, Nulty Ciara, Salas Rafael, Clarke Dave, Geraghty Jennifer, Duffy Conor, Foley Barry, John Uwe, Quiliam Michael A, McCarron Pearse, Miles Christopher O., Silke Joe, Cembella Allan, Tilmann Urban, Hess Philipp (2014). AZASPIRACIDS – Toxicological Evaluation, Test Methods and Identifcation of the Source Organisms (ASTOX II) . Marine Research Sub-Programme (NDP 2007-2013) Series .

Jauffrais Thierry, Sechet Veronique, Herrenknecht Christine, Truquet Philippe, Savar Veronique, Tillmann Urban, Hess Philipp (2013). Effect of environmental and nutritional factors on growth and azaspiracid production of the dinoflagellate Azadinium spinosum . Harmful Algae , 27, 138-148 . Publisher's official version : https://doi.org/10.1016/j.hal.2013.05.009 , Open Access version : https://archimer.ifremer.fr/doc/00149/26054/

Jauffrais Thierry, Kilcoyne Jane, Herrenknecht Christine, Truquet Philippe, Sechet Veronique, Miles Christopher O., Hess Philipp (2013). Dissolved azaspiracids are absorbed and metabolized by blue mussels (Mytilus edulis) . Toxicon , 65, 81-89 . Publisher's official version : https://doi.org/10.1016/j.toxicon.2013.01.010 , Open Access version : https://archimer.ifremer.fr/doc/00136/24757/

Marchetti Julie, Bougaran Gael, Jauffrais Thierry, Lefebvre Sebastien, Rouxel Catherine, Saint-Jean Bruno, Lukomska Ewa, Robert Rene, Cadoret Jean-Paul (2013). Effects of blue light on the biochemical composition and photosynthetic activity of Isochrysis sp. (T-iso) . Journal Of Applied Phycology , 25(1), 109-119 . Publisher's official version : https://doi.org/10.1007/s10811-012-9844-y , Open Access version : https://archimer.ifremer.fr/doc/00085/19599/

Jauffrais Thierry, Contreras Andrea, Herrenknecht Christine, Truquet Philippe, Sechet Veronique, Tillmann Urban, Hess Philipp (2012). Effect of Azadinium spinosum on the feeding behaviour and azaspiracid accumulation of Mytilus edulis . Aquatic Toxicology , 124, 179-187 . Publisher's official version : https://doi.org/10.1016/j.aquatox.2012.08.016 , Open Access version : https://archimer.ifremer.fr/doc/00090/20174/

Jauffrais Thierry (2012). Écophysiologie des dinoflagellés du genre Azadinium, production toxinique et transfert trophique vers les mollusques bivalves . PhD Thesis , Université de Nantes . https://archimer.ifremer.fr/doc/00111/22217/

Jauffrais Thierry, Marcaillou-Le Baut Claire, Herrenknecht Christine, Truquet Philippe, Sechet Veronique, Nicolau Elodie, Tillmann Urban, Hess Philipp (2012). Azaspiracid accumulation, detoxification and biotransformation in blue mussels (Mytilus edulis) experimentally fed Azadinium spinosum . Toxicon , 60(4), 582-595 . Publisher's official version : https://doi.org/10.1016/j.toxicon.2012.04.351 , Open Access version : https://archimer.ifremer.fr/doc/00088/19877/

Jauffrais Thierry, Kilcoyne Jane, Sechet Veronique, Herrenknecht Christine, Truquet Philippe, Herve Fabienne, Berard Jean-Baptiste, Nulty Ciara, Taylor Sarah, Tillmann Urban, Miles Christopher O., Hess Philipp (2012). Production and Isolation of Azaspiracid-1 and -2 from Azadinium spinosum Culture in Pilot Scale Photobioreactors . Marine Drugs , 10(6), 1360-1382 . Publisher's official version : https://doi.org/10.3390/md10061360 , Open Access version : https://archimer.ifremer.fr/doc/00088/19875/

Sechet Veronique, Sibat Manoella, Chomerat Nicolas, Nezan Elisabeth, Grossel Hubert, Lehebel-Peron Jean-Brieuc, Jauffrais Thierry, Ganzin Nicolas, Marco-Miralles Francoise, Lemee Rodolphe, Amzil Zouher (2012). Ostreopsis cf. ovata in the French Mediterranean coast: molecular characterisation and toxin profile . Cryptogamie Algologie , 33(2), 89-98 .

Jauffrais Thierry, Herrenknecht Christine, Sechet Veronique, Sibat Manoella, Tillmann Urban, Krock Bernd, Kilcoyne Jane, Miles Christopher O., McCarron Pearse, Amzil Zouher, Hess Philipp (2012). Quantitative analysis of azaspiracids in Azadinium spinosum cultures . Analytical And Bioanalytical Chemistry , 403(3), 833-846 . Publisher's official version : https://doi.org/10.1007/s00216-012-5849-2 , Open Access version : https://archimer.ifremer.fr/doc/00077/18812/

Salas Rafael, Tillmann Urban, John Uwe, Kilcoyne Jane, Burson Amanda, Cantwell Caoimhe, Hess Philipp, Jauffrais Thierry, Silke Joe (2011). The role of Azadinium spinosum (Dinophyceae) in the production of azaspiracid shellfish poisoning in mussels . Harmful Algae , 10(6), 774-783 . Publisher's official version : https://doi.org/10.1016/j.hal.2011.06.010 , Open Access version : https://archimer.ifremer.fr/doc/00049/16049/

Jauffrais Thierry, Sechet Veronique, Herrenknecht Christine, Tillmann Urban, Krock Bernd, Amzil Zouher, Hess Philipp (2010). Growth and toxin production of Azadinium spinosum in batch and continuous culture . Proceedings of the 14th International Conference on Harmful Algae. International Society for the Study of Harmful Algae and Intergovernmental Oceanographic Commission of UNESCO 2012, Crete, pp. 90-92 . https://archimer.ifremer.fr/doc/00152/26348/

Marchetti Julie, Jauffrais Thierry, Bougaran Gael, Lefebvre Sebastien, Saint-Jean Bruno, Lukomska Ewa, Robert Rene, Cadoret Jean-Paul (2010). Effet de la lumière bleue sur la composition biochimique et la réponse photosynthétique d’Isochrysis affinis galbana . Colloque "ALGUES, Filières du Futur !", 17 au 19 nov. 2010, Parc Techno. Biocitech, Paris .