Jean-Baptiste Romagnan

Unit of Fisheries Ecology and Modelling (PDG-RBE-EMH)

Contact form

+33 (0)2 40 37 41 62

Employer : Ifremer

Site : Nantes

Postal address : Centre Atlantique - Rue de l'Ile d'Yeu - BP 21105 - 44311 Nantes Cedex 03

URL : https://annuaire.ifremer.fr/cv/23483/en/

Photos

Tutoriel vidéo campagne halieutique - bathysonde [...]
Tutoriel vidéo campagne halieutique - CUFES et [...]
Tutoriel vidéo campagne halieutique - filet WP2
Tutoriel vidéo campagne halieutique - dosage des [...]


Dataset

2018

Elineau Amanda, Desnos Corinne, Jalabert Laetitia, Olivier Marion, Romagnan Jean-Baptiste, Costa Brandao Manoela, Lombard Fabien, Llopis Natalia, Courboulès Justine, Caray-Counil Louis, Serranito Bruno, Irisson Jean-Olivier, Picheral Marc, Gorsky Gaby, Stemmann Lars (2018). ZooScanNet: plankton images captured with the ZooScan . SEANOE . https://doi.org/10.17882/55741
Doray Mathieu, Huret Martin, Authier Matthieu, Duhamel Erwan, Romagnan Jean-Baptiste, Dupuy Christine, Spitz Jérôme, Sanchez Florence, Berger Laurent, Dorémus Ghislain, Bourriau Paul, Grellier Patrick, Pennors Laurence, Masse Jacques, Petitgas Pierre (2018). Gridded maps of pelagic ecosystem parameters collected in the Bay of Biscay during the PELGAS integrated survey . SEANOE . https://doi.org/10.17882/53389

2016

Blanluet Arthur, Doray Mathieu, Berger Laurent, Romagnan Jean-Baptiste, Le Bouffant Naig, Lehuta Sigrid, Petitgas Pierre (2016). "Characterization of sound scattering layers in the Bay of Biscay using broadband acoustics, nets and video" acoustics and biological Data . SEANOE . https://doi.org/10.17882/62440


Bibliography

2021

Costa Brandao Manoela, Benedetti Fabio, Martini Séverine, Dodji Soviadan Yawouvi, Irisson Jean-Olivier, Romagnan Jean-Baptiste, Elineau Amanda, Desnos Corinne, Jalabert Laetitia, Freire Andrea S, Picheral Marc, Guidi Lionel, Gorsky Gabriel, Bowler Chris, Karp-Boss Lee, Henry Nicolas, de Vargas Colomban, Sullivan Matthew B, Tara Oceans Consortium Coordinators , Stemmann Lars, Lombard Fabien, Tara Oceans Consortium Coordinators : , Acinas Silvia G, Babin Marcel, Bork Peer, Boss Emmanuel, Bowler Chris, Cochrane Guy, de Vargas Colomban, Gorsky Gabriel, Guidi Lionel, Grimsley Nigel, Hingamp Pascal, Ludicone Daniele, Jaillon Olivier, Kandels Stefanie, Karp-Boss Lee, Karsenti Eric, Not Fabrice, Ogata Hiroyuki, Poultron Nicole, Pesant Stephane, Raes Jeroen, Sardet Christian, Speich Sabrina, Stemmann Lars, Sullivan Matthew B, Sunagawa Shinichi, Winckler Patrick (2021). Macroscale patterns of oceanic zooplankton composition and size structure . Scientific Reports , 11(1), 19p. Publisher's official version : https://doi.org/10.1038/s41598-021-94615-5 , Open Access version : https://archimer.ifremer.fr/doc/00718/83001/

2020

Petitgas Pierre, Renard Didier, Desassis Nicolas, Huret Martin, Romagnan Jean-Baptiste, Doray Mathieu, Woillez Mathieu, Rivoirard Jacques (2020). Analysing Temporal Variability in Spatial Distributions Using Min–Max Autocorrelation Factors: Sardine Eggs in the Bay of Biscay . Mathematical Geosciences , 52(3), 337-354 . Publisher's official version : https://doi.org/10.1007/s11004-019-09845-1 , Open Access version : https://archimer.ifremer.fr/doc/00599/71157/

2019

Blanluet Arthur, Doray Mathieu, Berger Laurent, Romagnan Jean-Baptiste, Le Bouffant Naig, Lehuta Sigrid, Petitgas Pierre (2019). Characterization of sound scattering layers in the Bay of Biscay using broadband acoustics, nets and video . Plos One , 14(10), e0223618 (19p.) . Publisher's official version : https://doi.org/10.1371/journal.pone.0223618 , Open Access version : https://archimer.ifremer.fr/doc/00588/70035/
Petitgas Pierre, Renard Didier, Desassis Nicolas, Huret Martin, Romagnan Jean-Baptiste, Doray Mathieu, Woillez Mathieu, Rivoirard Jacques (2019). Application des MAFs à l'analyse de la variabilité spatio-temporelle des frayères de sardine . XIVèmes Journées de Géostatistique 2019. 19-20 septembre 2019, Fontainebleau, France .
Thomas Amandine, Baudrier Jerome, Gauthier Emilie (2019). Bancarisation des données planctoniques des campagnes halieutiques . Proposition de structuration des données planctoniques des campagnes optimisées pour une intégration dans le SI Quadrige². ODE/VIGIES/19/06 . https://doi.org/10.13155/62496
Lomnard Fabien, Boss Emmanuel, Waite Anya M., Vogt Meike, Uitz Julia, Stemman Lars, Sosik Heidi M., Schulz Jan, Romagnan Jean-Baptiste, Picheral Marc, Pearlman Jay, Ohman Mark D, Niehoff Barbara, Möller Klas O, Miloslavich Patricia, Lara-Lpez Ana, Kudela Raphael, Lopes Ribens M, Kiko Rainer, Karp-Boss Lee, Jaffe Jules S, Iversen Morten H, Irisson Jean-Olivier, Fennel Katja, Hauss Helena, Guidi Lionel, Gorsky Gaby, Giering Sarah L.C., Gaube Peter, Gallager Scott, Dubelaar George, Cowen Robert K, Carlotti François, Briseno-Avena Christian, Berline Léo, Benoit-Bird Kelly, Bax Nicholas, Batten Sonia, Ayata Sakina Dorothée, Artigas Luis Felipe, Appeltans Ward (2019). Globally Consistent Quantitative Observations of Planktonic Ecosystems . Frontiers In Marine Science , 6(196), 21p. Publisher's official version : https://doi.org/10.3389/fmars.2019.00196 , Open Access version : https://archimer.ifremer.fr/doc/00490/60217/
Caputi Luigi, Carradec Quentin, Eveillard Damien, Kirilovsky Amos, Pelletier Eric, Karlusich Juan J. Pierella, Vieira Fabio Rocha Jimenez, Villar Emilie, Chaffron Samuel, Malviya Shruti, Scalco Eleonora, Acinas Silvia G., Alberti Adriana, Aury Jean-Marc, Benoiston Anne-Sophie, Bertrand Arnaud, Biard Tristan, Bittner Lucie, Boccara Martine, Brum Jennifer R., Brunet Cedric, Busseni Greta, Carratala Anna, Claustre Herve, Coelho Luis Pedro, Colin Sbastien, D'Aniello Salvatore, Da Silva Corinne, Del Core Marianna, Dore Hugo, Gasparini Stephane, Kokoszka Florian, Jamet Jean-Louis, Lejeusne Christophe, Lepoivre Cyrille, Lescot Magali, Lima-Mendez Gipsi, Lombard Fabien, Lukes Julius, Maillet Nicolas, Madoui Mohammed-Amin, Martinez Elodie, Mazzocchi Maria Grazia, Neou Mario B., Paz-Yepes Javier, Poulain Julie, Ramondenc Simon, Romagnan Jean-Baptiste, Roux Simon, Manta Daniela Salvagio, Sanges Remo, Speich Sabrina, Sprovieri Mario, Sunagawa Shinichi, Taillandier Vincent, Tanaka Atsuko, Tirichine Leila, Trottier Camille, Uitz Julia, Veluchamy Alaguraj, Vesela Jana, Vincent Flora, Yau Sheree, Kandels-Lewis Stefanie, Searson Sarah, Dimier Cline, Picheral Marc, Bork Peer, Boss Emmanuel, de Vargas Colomban, Follows Michael J., Grimsley Nigel, Guidi Lionel, Hingamp Pascal, Karsenti Eric, Sordino Paolo, Stemmann Lars, Sullivan Matthew B., Tagliabue Alessandro, Zingone Adriana, Garczarek Laurence, D'Ortenzio Fabrizio, Testor Pierre, Not Fabrice, D'Alcala Maurizio Ribera, Wincker Patrick, Bowler Chris, Iudicone Daniele, Gorsky Gabriel, Jaillon Olivier, Karp-Boss Lee, Krzic Uros, Ogata Hiroyuki, Pesant Stephane, Raes Jeroen, Reynaud Emmanuel G., Sardet Christian, Sieracki Mike, Velayoudon Didier, Weissenbach Jean (2019). Community-Level Responses to Iron Availability in Open Ocean Planktonic Ecosystems . Global Biogeochemical Cycles , 33(3), 391-419 . Publisher's official version : https://doi.org/10.1029/2018GB006022 , Open Access version : https://archimer.ifremer.fr/doc/00475/58680/
Trenkel Verena, Vaz Sandrine, Albouy Camille, Brind'Amour Anik, Duhamel Erwan, Laffargue Pascal, Romagnan Jean-Baptiste, Simon Julien, Lorance Pascal (2019). We can reduce the impact of scientific trawling on marine ecosystems . Marine Ecology Progress Series , 609, 277-282 . Publisher's official version : https://doi.org/10.3354/meps12834 , Open Access version : https://archimer.ifremer.fr/doc/00470/58161/
Petitgas Pierre, Renard Didier, Desassis Nicolas, Romagnan Jean-Baptiste, Huret Martin, Doray Mathieu, Woillez Mathieu, Rivoirard Jacques (2019). Inter-annual variability in fish spatial distributions as revealed by survey data and their space-time modelling . ACS 2019 - ICES Annual Science Conference 2019. 9-12 September 2019 Gothenburg, Sweden. ICES CM 2019/A:329 .

2018

Petitgas Pierre, Huret Martin, Dupuy Christine, Spitz Jerome, Authier Matthieu, Romagnan Jean-Baptiste, Doray Mathieu (2018). Ecosystem spatial structure revealed by integrated survey data . Progress In Oceanography , 166, 189-198 . Publisher's official version : https://doi.org/10.1016/j.pocean.2017.09.012 , Open Access version : https://archimer.ifremer.fr/doc/00403/51402/
Doray Mathieu, Petitgas Pierre, Romagnan Jean-Baptiste, Huret Martin, Duhamel Erwan, Dupuy Christine, Spitz Jerome, Authier Matthieu, Sanchez Florence, Berger Laurent, Doremus Ghislain, Bourriau Paul, Grellier Patrick, Masse Jacques (2018). The PELGAS survey: ship-based integrated monitoring of the Bay of Biscay pelagic ecosystem . Progress In Oceanography , 166, 15-29 . Publisher's official version : https://doi.org/10.1016/j.pocean.2017.09.015 , Open Access version : https://archimer.ifremer.fr/doc/00407/51801/
Colas Florent, Tardivel Morgan, Perchoc Jonathan, Lunven Michel, Forest Bertrand, Guyader Gerard, Danielou Marie-Madeleine, Le Mestre Sophie, Bourriau Paul, Antajan Elvire, Sourisseau Marc, Huret Martin, Petitgas Pierre, Romagnan Jean-Baptiste (2018). The ZooCAM, a new in-flow imaging system for fast onboard counting, sizing and classification of fish eggs and metazooplankton . Progress In Oceanography , 166, 54-65 . Publisher's official version : https://doi.org/10.1016/j.pocean.2017.10.014 , Open Access version : https://archimer.ifremer.fr/doc/00407/51833/
Doray Mathieu, Petitgas Pierre, Huret Martin, Duhamel Erwan, Romagnan Jean-Baptiste, Authier Matthieu, Dupuy Christine, Spitz Jerome (2018). Monitoring small pelagic fish in the Bay of Biscay ecosystem, using indicators from an integrated survey . Progress In Oceanography , 166, 168-188 . Publisher's official version : https://doi.org/10.1016/j.pocean.2017.12.004 , Open Access version : https://archimer.ifremer.fr/doc/00414/52552/
Doray Mathieu, Petitgas Pierre, Romagnan Jean-Baptiste, Huret Martin, Duhamel Erwan, Dupuy Christine, Spitz Jérôme, Berger Laurent, Dorémus Ghislain, Bourriau Paul, Grellier Patrick, Massé Jacques, Sanchez Florence (2018). Data products for fish stocks and ecosystem assessment:the PELGAS survey example . ASC 2018 - ICES Annual Science Conference 2018. 24-27 september 2018, Hamburg . https://archimer.ifremer.fr/doc/00457/56844/
Doray Mathieu, Petitgas Pierre, Romagnan Jean-Baptiste, Huret Martin, Duhamel Erwan, Dupuy Christine, Spitz Jérôme, Authier Matthieu, Berger Laurent, Doremus Ghislain, Bourriau Paul, Grellier Patrick, Masse Jacques, Sanchez Florence (2018). Fifteen years of data from the PELGAS integrated survey (2000-2015): what have we learned on the Bay of Biscay pelagic ecosystem? ISOBAY 16 - XVIth International Symposium of Oceanography of the Bay of Biscay. 5-7 June 2018, Anglet, France . https://archimer.ifremer.fr/doc/00445/55665/
ICES (2018). Report of the Working Group on Acoustic and Egg Surveys for Sardine and Anchovy in ICES Areas 7, 8 and 9 (WGACEGG). 19-23 November. Nantes, France . ICES CM 2018/EOSG:03. 355pp. https://archimer.ifremer.fr/doc/00585/69750/
ICES (2018). Report of the Workshop on Machine Learning in Marine Science (WKM-LEARN), 16-20 April 2018, ICES Headquarters, Copenhagen, Denmark . ICES CM 2018/EOSG. 28. pp. https://archimer.ifremer.fr/doc/00586/69780/

2016

Romagnan Jean-Baptiste, Aldamman Lama, Gasparini Stephane, Nival Paul, Aubert Anais, Jamet Jean Louis, Stemmann Lars (2016). High frequency mesozooplankton monitoring: Can imaging systems and automated sample analysis help us describe and interpret changes in zooplankton community composition and size structure — An example from a coastal site . Journal Of Marine Systems , 162, 18-28 . Publisher's official version : https://doi.org/10.1016/j.jmarsys.2016.03.013 , Open Access version : https://archimer.ifremer.fr/doc/00323/43464/

2015

Villar Emilie, Farrant Gregory K., Follows Michael, Garczarek Laurence, Speich Sabrina, Audic Stephane, Bittner Lucie, Blanke Bruno, Brum Jennifer R., Brunet Christophe, Casotti Raffaella, Chase Alison, Dolan John R., D'Ortenzio Fabrizio, Gattuso Jean-Pierre, Grima Nicolas, Guidi Lionel, Hill Christopher N., Jahn Oliver, Jamet Jean-Louis, Le Goff Herve, Lepoivre Cyrille, Malviya Shruti, Pelletier Eric, Romagnan Jean-Baptiste, Roux Simon, Santini Sebastien, Scalco Eleonora, Schwenck Sarah M., Tanaka Atsuko, Testor Pierre, Vannier Thomas, Vincent Flora, Zingone Adriana, Dimier Celine, Picheral Marc, Searson Sarah, Kandels-Lewis Stefanie, Acinas Silvia G., Bork Peer, Boss Emmanuel, de Vargas Colomban, Gorsky Gabriel, Ogata Hiroyuki, Pesant Stephane, Sullivan Matthew B., Sunagawa Shinichi, Wincker Patrick, Karsenti Eric, Bowler Chris, Not Fabrice, Hingamp Pascal, Iudicone Daniele (2015). Environmental characteristics of Agulhas rings affect interocean plankton transport . Science , 348(6237), 1-12 . https://doi.org/10.1126/science.1261447
Romagnan Jean-Baptiste, Legendre Louis, Guidi Lionel, Jamet Jean-Louis, Jamet Dominique, Mousseau Laure, Pedrotti Maria-Luiza, Picheral Marc, Gorsky Gabriel, Sardet Christian, Stemmann Lars (2015). Comprehensive Model of Annual Plankton Succession Based on the Whole-Plankton Time Series Approach . Plos One , 10(3), e0119219 . https://doi.org/10.1371/journal.pone.0119219

2013

Rossi Vincent, Garcon Veronique, Tassel Joelle, Romagnan Jean-Baptiste, Stemmann Lars, Jourdin Frederic, Morin Pascal, Morel Yves (2013). Cross-shelf variability in the Iberian Peninsula Upwelling System: Impact of a mesoscale filament . Continental Shelf Research , 59, 97-114 . https://doi.org/10.1016/j.csr.2013.04.008

2010

Gorsky Gaby, Ohman Mark D., Picheral Marc, Gasparini Stephane, Stemmann Lars, Romagnan Jean-Baptiste, Cawood Alison, Pesant Stephane, Garcia-Comas Carmen, Prejger Franck (2010). Digital zooplankton image analysis using the ZooScan integrated system . Journal Of Plankton Research , 32(3), 285-303 . https://doi.org/10.1093/plankt/fbp124


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