Cambon Marie-Anne, Cormier Alexandre, Aube Johanne, Cueff-Gauchard Valerie (2024). Genome of hydrothermal shrimp Rimicaris exoculata. IFREMER. https://sextant.ifremer.fr/record/e2ae7d37-cee5-4a00-b9c2-96e00099ca00/

Cueff-Gauchard Valerie, Aube Johanne, Lagadec Jean Romain, Bignon Laurent, Lafontaine Jean-Pierre, Hernandez-Avila I., Marsaud N., Shillito B., Amand L., Roussel Erwan, Cambon Marie-Anne . FISH, a new tool for in situ preservation of RNA in tissues of deep-sea mobile fauna . BioRxiv IN PRESS . Publisher's official version : https://doi.org/10.1101/2024.07.23.604794 , Open Access version : https://archimer.ifremer.fr/doc/00902/101364/

Guéganton Marion, Methou Pierre, Aubé Johanne, Noël Cyril, Rouxel Ouafae, Cueff-Gauchard Valerie, Gayet Nicolas, Durand Lucile, Pradillon Florence, Cambon Marie-Anne . Symbiont acquisition strategies in post-settlement stages of two co-occurring deep-sea Rimicaris shrimp. Advance IN PRESS . Publisher's official version : https://doi.org/10.22541/au.171309964.46362343/v1 , Open Access version : https://archimer.ifremer.fr/doc/00887/99898/

McTeer Logan, Moalic Yann, Cueff-Gauchard Valerie, Catchpole Ryan, Hogrel Gaëlle, Lu Yang, Laurent Sebastien, Hemon Marie, Aubé Johanne, Leroy Elodie, Roussel Erwan, Oberto Jacques, Flament Didier, Dulermo Remi (2024). Cooperation between two modes for DNA replication initiation in the archaeon Thermococcus barophilus . Mbio , 15(4), 15p. Publisher's official version : https://doi.org/10.1128/mbio.03200-23 , Open Access version : https://archimer.ifremer.fr/doc/00883/99483/

Cambon Marie-Anne, Cathalot Cecile, Giunta Thomas, Pelleter Ewan, Pradillon Florence, Rospabé Mathieu, Roussel Erwan, Rouxel Olivier, Ybert Sebastien (2024). Rapport annuel sur les activités menées par l’Ifremer dans le cadre du contrat d'exploration des sulfures polymétalliques conclu, au nom de la France, avec l'Autorité Internationale des Fonds Marins (AIFM) – Période du 1er janvier au 31 décembre 2023 . REM/2024- 006 .

Allioux Maxime, Yvenou Steven, Merkel Alexander, Cozannet Marc, Aubé Johanne, Pommellec Jolann, Le Romancer Marc, Lavastre Véronique, Guillaume Damien, Alain Karine (2022). A metagenomic insight into the microbiomes of geothermal springs in the Subantarctic Kerguelen Islands . Scientific Reports , 12(1), 22243 (12p.) . Publisher's official version : https://doi.org/10.1038/s41598-022-26299-4 , Open Access version : https://archimer.ifremer.fr/doc/00813/92516/

Aubé Johanne, Cambon-Bonavita Marie-Anne, Velo-Suárez Lourdes, Cueff-Gauchard Valerie, Lesongeur Francoise, Guéganton Marion, Durand Lucile, Reveillaud Julie (2022). A novel and dual digestive symbiosis scales up the nutrition and immune system of the holobiont Rimicaris exoculata . Microbiome , 10(1), 189 (17p.) . Publisher's official version : https://doi.org/10.1186/s40168-022-01380-2 , Open Access version : https://archimer.ifremer.fr/doc/00768/87957/

Allioux Maxime, Yvenou Steven, Merkel Alexander, Cozannet Marc, Aube Johanne, Romancer Marc Le, Lavastre Véronique, Guillaume Damien, Alain Karine (2022). Metagenome-assembled genomes reveal many novel microbial lineages in the geothermal springs of the subantarctic Kerguelen Islands . Under review Scientific Reports , Version 1 (15p.) . Publisher's official version : https://doi.org/10.21203/rs.3.rs-1525368/v1 , Open Access version : https://archimer.ifremer.fr/doc/00767/87881/

Vigneron Adrien, Cruaud Perrine, Aube Johanne, Guyoneaud Remy, Goni-Urriza Marisol (2021). Transcriptomic evidence for versatile metabolic activities of mercury cycling microorganisms in brackish microbial mats . Npj Biofilms And Microbiomes , 7(1), 83 (11p.) . Publisher's official version : https://doi.org/10.1038/s41522-021-00255-y , Open Access version : https://archimer.ifremer.fr/doc/00738/84954/

Cambon-Bonavita Marie-Anne, Aubé Johanne, Cueff-Gauchard Valerie, Reveillaud Julie (2021). Niche partitioning in the Rimicaris exoculata holobiont: the case of the first symbiotic Zetaproteobacteria . Microbiome , 9(1), 87 (16p.) . Publisher's official version : https://doi.org/10.1186/s40168-021-01045-6 , Open Access version : https://archimer.ifremer.fr/doc/00689/80089/

François David, Godfroy Anne, Mathien Clémentine, Aubé Johanne, Cathalot Cecile, Lesongeur Francoise, L'Haridon Stephane, Philippon Xavier, Roussel Erwan (2021). Persephonella atlantica sp. nov.: How to adapt to physico-chemical gradients in high temperature hydrothermal habitats . Systematic And Applied Microbiology , 44(1), 126176 (10p.) . Publisher's official version : https://doi.org/10.1016/j.syapm.2020.126176 , Open Access version : https://archimer.ifremer.fr/doc/00665/77688/

Aubé Johanne, Senin Pavel, Bonin Patricia, Pringault Olivier, Jeziorski Céline, Bouchez Olivier, Klopp Christophe, Guyoneaud Rémy, Goñi-Urriza Marisol (2020). Meta-omics Provides Insights into the Impact of Hydrocarbon Contamination on Microbial Mat Functioning . Microbial Ecology , 80(2), 286-295 . https://doi.org/10.1007/s00248-020-01493-x

Bellec Laure, Cambon-Bonavita Marie-Anne, Durand Lucile, Aube Johanne, Gayet Nicolas, Sandulli Roberto, Brandily Christophe, Zeppilli Daniela (2020). Microbial Communities of the Shallow-Water Hydrothermal Vent Near Naples, Italy, and Chemosynthetic Symbionts Associated With a Free-Living Marine Nematode . Frontiers In Microbiology , 11, 2023 (16p.) . Publisher's official version : https://doi.org/10.3389/fmicb.2020.02023 , Open Access version : https://archimer.ifremer.fr/doc/00643/75544/

Pérez-Bernal Maria Fernanda, Brito Elcia M. S., Bartoli Manon, Aubé Johanne, Ollivier Bernard, Guyoneaud Rémy, Hirschler-Réa Agnès (2020). Desulfobotulus mexicanus sp. nov., a novel sulfate-reducing bacterium isolated from the sediment of an alkaline crater lake in Mexico . International Journal Of Systematic And Evolutionary Microbiology , 70(5), 3219-3225 . Publisher's official version : https://doi.org/10.1099/ijsem.0.004159 , Open Access version : https://archimer.ifremer.fr/doc/00622/73396/

Methou Pierre, Hernández-Ávila Ivan, Aube Johanne, Cueff-Gauchard Valerie, Gayet Nicolas, Amand Louis, Shillito Bruce, Pradillon Florence, Cambon-Bonavita Marie-Anne (2019). Is It First the Egg or the Shrimp? – Diversity and Variation in Microbial Communities Colonizing Broods of the Vent Shrimp Rimicaris exoculata During Embryonic Development . Frontiers In Microbiology , 10(808), 19p. Publisher's official version : https://doi.org/10.3389/fmicb.2019.00808 , Open Access version : https://archimer.ifremer.fr/doc/00489/60067/

Methou Pierre, Hernandez Ivan, Shillito Bruce, Aube Johanne, Cueff-Gauchard Valerie, Cambon Bonavita Marie-Anne, Pradillon Florence (2018). Is it the Egg first or the Shrimp? Diversity and evolution of the microbial communities colonizing broods of the vent shrimp Rimicaris exoculata throughout embryonic development . DSBS 2018 - 15th Deep-Sea Biology Symposium. 09 au 14/09/2018, Monterey (Californie) .