Bibliography
2011
Birrien Jean-Louis, Zeng Xiang, Jebbar Mohamed, Cambon-Bonavita Marie-Anne, Querellou Joel, Oger Philippe, Bienvenu Nadege, Xiao Xiang, Prieur Daniel (2011). Pyrococcus yayanosii sp nov., an obligate piezophilic hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent . International Journal Of Systematic And Evolutionary Microbiology , 61, 2827-2831 . https://doi.org/10.1099/ijs.0.024653-0
Roussel Erwan, Konn Cecile, Charlou Jean-Luc, Donval Jean-Pierre, Fouquet Yves, Querellou Joel, Prieur Daniel, Cambon-Bonavita Marie-Anne (2011). Comparison of microbial communities associated with three Atlantic ultramafic hydrothermal systems . Fems Microbiology Ecology , 77(3), 647-665 . Publisher's official version : https://doi.org/10.1111/j.1574-6941.2011.01161.x , Open Access version : https://archimer.ifremer.fr/doc/00067/17836/
Konn Cecile, Testemale D., Querellou Joel, Holm N. G., Charlou Jean-Luc (2011). New insight into the contributions of thermogenic processes and biogenic sources to the generation of organic compounds in hydrothermal fluids . Geobiology , 9(1), 79-93 . Publisher's official version : https://doi.org/10.1111/j.1472-4669.2010.00260.x , Open Access version : https://archimer.ifremer.fr/doc/00023/13416/
2010
Joint Ian, Mühling Martin, Querellou Joel (2010). Culturing marine bacteria - an essential prerequisite for biodiscovery . Microbial Biotechnology , 3(5), 564-575 . Publisher's official version : https://doi.org/10.1111/j.1751-7915.2010.00188.x , Open Access version : https://archimer.ifremer.fr/doc/00035/14631/
Querellou Joel (2010). Biotechnologie des archées . Biofutur , 29(310), 45-48 . Open Access version : https://archimer.ifremer.fr/doc/00004/11488/
Querellou Joel, Cadoret Jean-Paul, Allen Michael J., Collen Jonas (2010). Marine Biotechnology . In Introduction to marine genomics (Springer) .
2009
Slobodkina G. B., Kolganova T. V., Querellou Joel, Bonch-Osmolovskaya E. A., Slobodkin A. I. (2009). Geoglobus acetivorans sp nov., an iron(III)-reducing archaeon from a deep-sea hydrothermal vent . International journal of systematic and evolutionary microbiology , 59, 2880-2883 . Publisher's official version : https://doi.org/10.1099/ijs.0.011080-0 , Open Access version : https://archimer.ifremer.fr/doc/00000/6977/
Castrec Benoit, Rouillon Christophe, Henneke Ghislaine, Flament Didier, Querellou Joel, Raffin Jean-Paul (2009). Binding to PCNA in Euryarchaeal DNA Replication Requires Two PIP Motifs for DNA Polymerase D and One PIP Motif for DNA Polymerase B . Journal of Molecular Biology , 394(2), 209-218 . Publisher's official version : https://doi.org/10.1016/j.jmb.2009.09.044 , Open Access version : https://archimer.ifremer.fr/doc/00000/7317/
Takai Ken, Miyazaki Masayuki, Hirayama Hisako, Nakagawa Satoshi, Querellou Joel, Godfroy Anne (2009). Isolation and physiological characterization of two novel, piezophilic, thermophilic chemolithoautotrophs from a deep-sea hydrothermal vent chimney . Environmental Microbiology , 11(8), 1983-1997 . Publisher's official version : https://doi.org/10.1111/j.1462-2920.2009.01921.x , Open Access version : https://archimer.ifremer.fr/doc/00000/6652/
Zeng Xiang, Birrien Jean-Louis, Fouquet Yves, Cherkashov Georgy, Jebbar Mohamed, Querellou Joel, Oger Philippe, Cambon-Bonavita Marie-Anne, Xiao Xiang, Prieur Daniel (2009). Pyrococcus CH1, an obligate piezophilic hyperthermophile: extending the upper pressure-temperature limits for life . The ISME journal (Multidisciplinary Journal of Microbial Ecology) , 3(7), 873-876 . Publisher's official version : https://doi.org/10.1038/ismej.2009.21 , Open Access version : https://archimer.ifremer.fr/doc/00000/6812/
Alain Karine, Querellou Joel (2009). Cultivating the uncultured: limits, advances and future challenges . Extremophiles , 13(4), 583-594 . Publisher's official version : https://doi.org/10.1007/s00792-009-0261-3 , Open Access version : https://archimer.ifremer.fr/doc/00000/6820/
Alain Karine, Callac Nolwenn, Guegan Marianne, Lesongeur Francoise, Crassous Philippe, Cambon-Bonavita Marie-Anne, Querellou Joel, Prieur Daniel (2009). Nautilia abyssi sp nov., a thermophilic, chemolithoautotrophic, sulfur-reducing bacterium isolated from an East Pacific Rise hydrothermal vent . International journal of systematic and evolutionary microbiology , 59, 1310-1315 . Publisher's official version : https://doi.org/10.1099/ijs.0.005454-0 , Open Access version : https://archimer.ifremer.fr/doc/00000/6585/
Slobodkina G. B., Kolganova T. V., Chernyh N. A., Querellou Joel, Bonch-Osmolovskaya E. A., Slobodkin A. I. (2009). Deferribacter autotrophicus sp nov., an iron(III)-reducing bacterium from a deep-sea hydrothermal vent . International journal of systematic and evolutionary microbiology , 59, 1508-1512 . Publisher's official version : https://doi.org/10.1099/ijs.0.006767-0 , Open Access version : https://archimer.ifremer.fr/doc/00000/6598/
2008
Palud Adeline, Villani Giuseppe, L'Haridon Stephane, Querellou Joel, Raffin Jean-Paul, Henneke Ghislaine (2008). Intrinsic properties of the two replicative DNA polymerases of Pyrococcus abyssi in replicating abasic sites: possible role in DNA damage tolerance? Molecular Microbiology , 70(3), 746-761 . Publisher's official version : https://doi.org/10.1111/j.1365-2958.2008.06446.x , Open Access version : https://archimer.ifremer.fr/doc/00000/6113/
Roussel Erwan, Cambon-Bonavita Marie-Anne, Querellou Joel, Cragg B, Webster G, Prieur D, Parkes R (2008). Extending the sub-sea-floor biosphere . Science , 320(5879), 1046 . Publisher's official version : https://doi.org/10.1126/science.1154545 , Open Access version : https://archimer.ifremer.fr/doc/00000/4209/
2007
Le Breton Magali, Henneke Ghislaine, Norais C, Flament Didier, Myllykallio H, Querellou Joel, Raffin Jean-Paul (2007). The heterodimeric primase from the euryarchaeon Pyrococcus abyssi: A multifunctional enzyme for initiation and repair? Journal of Molecular Biology , 374(5), 1172-1185 . Publisher's official version : https://doi.org/10.1016/j.jmb.2007.10.015 , Open Access version : https://archimer.ifremer.fr/doc/00000/3520/
Postec Anne, Lesongeur Francoise, Pignet Patricia, Ollivier B, Querellou Joel, Godfroy Anne (2007). Continuous enrichment cultures: insights into prokaryotic diversity and metabolic interactions in deep-sea vent chimneys . Extremophiles , 11(6), 747-757 . Publisher's official version : https://doi.org/10.1007/s00792-007-0092-z , Open Access version : https://archimer.ifremer.fr/doc/00000/3885/
Rouillon Christophe, Henneke Ghislaine, Flament Didier, Querellou Joel, Raffin Jean-Paul (2007). DNA polymerase switching on homotrimeric PCNA at the replication fork of the euryarchaea Pyrococcus abyssi . Journal of Molecular Biology , 369(2), 343-355 . Publisher's official version : https://doi.org/10.1016/j.jmb.2007.03.054 , Open Access version : https://archimer.ifremer.fr/doc/00000/2638/
Desbruyere D, Arnaud-Haond Sophie, Fabri Marie-Claire, Guezennec Jean, Querellou Joel (2007). Deep-sea genetic resources . 02 2007 - DEEP/BIOMAR/2007-03 . https://archimer.ifremer.fr/doc/00153/26452/
2006
Ishibashi Jun-Ichiro, Lupton John E., Yamaguchi Toshiyuki, Querellou Joel, Nunoura Takuro, Takai Ken (2006). Expedition reveals changes in Lau Basin Hydrothermal System . Eos, Transactions American Geophysical Union , 87(2), 13-17 . Publisher's official version : https://doi.org/10.1029/2006EO020001 , Open Access version : https://archimer.ifremer.fr/doc/00451/56261/
2005
Henneke Ghislaine, Flament Didier, Hubscher Ulrich, Querellou Joel, Raffin Jean-Paul (2005). The hyperthermophilic euryarchaeota Pyrococcus abyssi likely requires the two DNA polymerases D and B for DNA replication . Journal of Molecular Biology , 350(1), 53-64 . Publisher's official version : https://doi.org/10.1016/j.jmb.2005.04.042 , Open Access version : https://archimer.ifremer.fr/doc/00000/423/
Postec Anne, Le Breton Claire, Fardeau Marie-Laure, Lesongeur Francoise, Pignet Patricia, Querellou Joel, Ollivier Bernard, Godfroy Anne (2005). Marinitoga hydrogenitolerans sp nov., a novel member of the order Thermotogales isolated from a black smoker chimney on the Mid-Atlantic Ridge . International journal of systematic and evolutionary microbiology , 55(2005), 1217-1221 . Publisher's official version : https://doi.org/10.1099/ijs.0.63550-0 , Open Access version : https://archimer.ifremer.fr/doc/00000/363/
Postec Anne, Urios Laurent, Lesongeur Francoise, Ollivier Bernard, Querellou Joel, Godfroy Anne (2005). Continuous enrichment culture and molecular monitoring to investigate the microbial diversity of thermophiles inhabiting deep-sea hydrothermal ecosystems . Current Microbiology , 50(3), 138-144 . Publisher's official version : https://doi.org/10.1007/s00284-004-4443-z , Open Access version : https://archimer.ifremer.fr/doc/00000/364/
Postec Anne, Pignet Patricia, Cueff-Gauchard Valerie, Schmitt Anne, Querellou Joel, Godfroy Anne (2005). Optimisation of growth conditions for continuous culture of the hyperthermophilic archaeon Thermococcus hydrothermalis and development of sulphur-free defined and minimal media . Research in Microbiology , 156(1), 82-87 . Publisher's official version : https://doi.org/10.1016/j.resmic.2004.08.001 , Open Access version : https://archimer.ifremer.fr/doc/00000/365/
2004
Alain Karine, Zbinden M, Le Bris Nadine, Lesongeur Francoise, Querellou Joel, Gaill F, Cambon-Bonavita Marie-Anne (2004). Early steps in microbial colonization processes at deep-sea hydrothermal vents . Environmental Microbiology , 6(3), 227-241 . https://doi.org/10.1111/j.1462-2920.2003.00557.x
2003
Alain Karine, Rolland Sophie, Crassous Philippe, Lesongeur Francoise, Zbinden Magali, Le Gall Christian, Godfroy Anne, Page Antoine, Juniper S Kim, Cambon-Bonavita Marie-Anne, Duchiron Francis, Querellou Joel (2003). Desulfurobacterium crinifex sp.nov., a novel thermophilic, pinkish-streamer forming, chemolithoautotrophic bacterium isolated from a Juan de Fuca Ridge hydrothermal vent and amendment of the genus Desulfurobacterium . Extremophiles , 7(5), 361-370 . Publisher's official version : https://doi.org/10.1007/s00792-003-0329-4 , Open Access version : https://archimer.ifremer.fr/doc/00000/663/
Cambon-Bonavita Marie-Anne, Lesongeur Francoise, Pignet Patricia, Wery Nathalie, Lambert Christian, Godfroy Anne, Querellou Joel, Barbier Georges (2003). Thermococcus atlanticus sp. nov., a hyperthermophilic Archaeon isolated from a deep-sea hydrothermal vent in the Mid-Atlantic Ridge (vol 7, pg 101, 2003) . Extremophiles , 7(4), 339-339 . https://doi.org/10.1007/s00792-003-0343-6
Cambon-Bonavita Marie-Anne, Lesongeur Francoise, Pignet Patricia, Wery Nathalie, Lambert Christian, Godfroy Anne, Querellou Joel, Barbier Georges (2003). Extremophiles, Thermophily section, species description Thermococcus atlanticas sp nov., a hyperthermophilic Archaeon isolated from a deep-sea hydrothermal vent in the Mid-Atlantic Ridge . Extremophiles , 7(2), 101-109 . https://doi.org/10.1007/s00792-002-0301-8
Cohen Gn, Barbe V, Flament Didier, Galperin M, Heilig R, Lecompte O, Poch O, Prieur D, Querellou Joel, Ripp R, Thierry Jc, Van Der Oost J, Weissenbach J, Zivanovic Y, Forterre P (2003). An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi . Molecular Microbiology , 47(6), 1495-1512 . https://doi.org/10.1046/j.1365-2958.2003.03381.x
2002
Alain Karine, Olagnon Michel, Desbruyeres Daniel, Page Antoine, Barbier Georges, Juniper Kim, Querellou Joel, Cambon-Bonavita Marie-Anne (2002). Phylogenetic characterization of the bacterial assemblage associated with mucous. secretions of the hydrothermal vent polychaete Paralvinella palmiformis . FEMS Microbiology Ecology , 42(3), 463-476 . Open Access version : https://archimer.ifremer.fr/doc/00000/661/
Henneke Ghislaine, Gueguen Yannick, Flament Didier, Azam Philippe, Querellou Joel, Dietrich Jacques, Hubscher Ulrich, Raffin Jean-Paul (2002). Replication factor C from the hyperthermophilic archaeon Pyrococcus abyssi does not need ATP hydrolysis for clamp-loading and contains a functionally conserved RFC PCNA-binding domain . Journal of Molecular Biology , 323(5), 795-810 . Publisher's official version : https://doi.org/10.1016/S0022-2836(02)01028-8 , Open Access version : https://archimer.ifremer.fr/doc/00000/675/
Alain Karine, Querellou Joel, Lesongeur Francoise, Pignet Patricia, Crassous Philippe, Raguenes Gerard, Cueff Valerie, Cambon-Bonavita Marie-Anne (2002). Caminibacter hydrogeniphilus gen. nov., sp nov., a novel thermophilic, hydrogen-oxidizing bacterium isolated from an East Pacific Rise hydrothermal vent . International Journal Of Systematic And Evolutionary Microbiology , 52, 1317-1323 . https://doi.org/10.1099/ijs.0.02195-0
Alain Karine, Pignet Patricia, Zbinden M, Quillevere M, Duchiron F, Donval Jean-Pierre, Lesongeur Francoise, Raguenes Gerard, Crassous Philippe, Querellou Joel, Cambon-Bonavita Marie-Anne (2002). Caminicella sporogenes gen. nov., sp nov., a novel thermophilic spore-forming bacterium isolated from an East-Pacific Rise hydrothermal vent . International journal of systematic and evolutionary microbiology , 52, 1621-1628 . Publisher's official version : https://doi.org/10.1099/ijs.0.02142-0 , Open Access version : https://archimer.ifremer.fr/doc/00000/528/
2001
Querellou Joel, Alain Karine, Cambon-Bonavita Marie-Anne (2001). Thermophiles from deep-sea hydrothermal vents . Vie Et Milieu Life And Environment , 51(4), 161-172 .
2000
Cambon-Bonavita Marie-Anne, Schmitt P, Zieger M, Flaman Jm, Lesongeur Francoise, Raguenes Gerard, Bindel D, Frisch N, Lakkis Z, Dupret D, Barbier Georges, Querellou Joel (2000). Cloning, expression, and characterization of DNA polymerase I from the hyperthermophilic archaea Thermococcus fumicolans . Extremophiles , 4(4), 215-225 . https://doi.org/10.1007/PL00010714
1999
Barbier Georges, Godfroy Anne, Meunier Jean-Roch, Querellou Joel, Cambon Marie-Anne, Lesongeur Francoise, Grimont Pad, Raguenes Gerard (1999). Pyrococcus glycovorans sp nov., a hyperthermophilic archaeon isolated from the East Pacific Rise . International Journal Of Systematic Bacteriology , 49, 1829-1837 .
Querellou Joel, Gueguen Yannick, Barbier Georges, Dietrich Jacques (1999). Des enzymes pour l'industrie . Recherche , (317), 87-88 . Open Access version : https://archimer.ifremer.fr/doc/00092/20334/
1997
Godfroy Anne, Lesongeur Francoise, Raguenes Gerard, Querellou Joel, Antoine Elisabeth, Meunier Jean-Roch, Guezennec Jean, Barbier Georges (1997). Thermococcus hydrothermalis sp. nov, a new hyperthermophilic Archaeon isolated from a deep-sea hydrothermal vent . International Journal Of Systematic Bacteriology , 47(3), 622-626 . https://doi.org/10.1099/00207713-47-3-622
1995
Bouyoub Ahmed, Barbier Georges, Querellou Joel, Forterre Patrick (1995). A putative SOS repair gene (dinF-like) in a hyperthermophilic archaeon . Gene , 167(1-2), 147-149 . https://doi.org/10.1016/0378-1119(95)00651-6