L'Haridon Stephane, Haroun Hani, Corre Erwan, Roussel Erwan, Chalopin Morgane, Pignet Patricia, Balière Charlotte, La Cono Violetta, Jebbar Mohamed, Yakimov Michail, Toffin Laurent (2020). Methanohalophilus profundi sp. nov., a methylotrophic halophilic piezophilic methanogen isolated from a deep hypersaline anoxic basin . Systematic And Applied Microbiology , 43(5), 126107 (8p.) . Publisher's official version : https://doi.org/10.1016/j.syapm.2020.126107 , Open Access version : https://archimer.ifremer.fr/doc/00635/74744/

Brandily Christophe, Hubert Morgane, Bellec Laure, Pignet Patricia (2019). Analyses chimiques des eaux porales de la campagne Pioneer Naples 2017 - Golfe de Naples. CH4, H2S, Ions Majeurs . REM/EEP/LEP2019.06 .

Cruaud Perrine, Decker Carole, Olu Karine, Arnaud-Haond Sophie, Papot Claire, Le Baut Jocelyn, Vigneron Adrien, Khripounoff Alexis, Gayet Nicolas, Cathalot Cecile, Caprais Jean-Claude, Pignet Patricia, Godfroy Anne, Cambon Bonavita Marie-Anne (2019). Ecophysiological differences between vesicomyid species and metabolic capabilities of their symbionts influence distribution patterns of the deep‐sea clams . Marine Ecology-an Evolutionary Perspective , 40(3), e12541 (16p.) . Publisher's official version : https://doi.org/10.1111/maec.12541 , Open Access version : https://archimer.ifremer.fr/doc/00493/60426/

Boulais Myrina, Suquet Marc, Arsenault-Pernet Marie Eve Julie, Malo Florent, Queau Isabelle, Pignet Patricia, Ratiskol Dominique, Le Grand Jacqueline, Huber Matthias, Cosson Jacky (2018). pH controls spermatozoa motility in the Pacific oyster ( Crassostrea gigas ) . Biology Open , 7(3), bio031427 (8p.) . Publisher's official version : https://doi.org/10.1242/bio.031427 , Open Access version : https://archimer.ifremer.fr/doc/00428/53976/

Rabouille C., Olu Karine, Baudin F., Khripounoff Alexis, Dennielou Bernard, Arnaud-Haond Sophie, Babonneau Nathalie, Bayle Christophe, Beckler J., Bessette Sandrine, Bombled B., Bourgeois S., Brandily Christophe, Caprais Jean-Claude, Cathalot Cecile, Charlier K., Corvaisier R., Croguennec Chantal, Cruaud Perrine, Decker Carole, Droz L., Gayet Nicolas, Godfroy Anne, Hourdez S., Le Bruchec J., Saout Johan, Le Saout Marie-Helene, Lesongeur Francoise, Martinez P., Mejanelle L., Michalopoulos P., Mouchel Olivier, Noel Philippe, Pastor Lucie, Picot M., Pignet Patricia, Pozzato L., Pruski A. M., Rabiller Manuella, Raimonet M., Ragueneau O., Reyss J. L., Rodier Philippe, Ruesch Blandine, Ruffine Livio, Savignac F., Senyarich C., Schnyder J., Sen Arunima, Stetten E., Sun Ming Yi, Taillefert M., Teixeira S., Tisnerat-Laborde N., Toffin Laurent, Tourolle Julie, Toussaint F., Vetion G., Jouanneau J. M., Bez M. (2017). The Congolobe project, a multidisciplinary study of Congo deep-sea fan lobe complex: Overview of methods, strategies, observations and sampling . Deep-sea Research Part Ii-topical Studies In Oceanography , 142, 7-24 . Publisher's official version : https://doi.org/10.1016/j.dsr2.2016.05.006 , Open Access version : https://archimer.ifremer.fr/doc/00335/44580/

Cruaud Perrine, Vigneron Adrien, Pignet Patricia, Caprais Jean-Claude, Lesongeur Francoise, Toffin Laurent, Godfroy Anne, Cambon-Bonavita Marie-Anne (2017). Comparative Study of Guaymas Basin Microbiomes: Cold Seeps vs. Hydrothermal Vents Sediments . Frontiers In Marine Science , 4(417), 1-15 . Publisher's official version : https://doi.org/10.3389/fmars.2017.00417 , Open Access version : https://archimer.ifremer.fr/doc/00415/52640/

Callac Nolwenn, Rouxel Olivier, Lesongeur Francoise, Liorzou Celine, Bollinger Claire, Pignet Patricia, Cheron Sandrine, Fouquet Yves, Rommevaux-Jestin Celine, Godfroy Anne (2015). Biogeochemical insights into microbe-mineral-fluid interactions in hydrothermal chimneys using enrichment culture . Extremophiles , 19(3), 597-617 . https://doi.org/10.1007/s00792-015-0742-5

Cruaud Perrine, Vigneron Adrien, Pignet Patricia, Caprais Jean-Claude, Lesongeur Francoise, Toffin Laurent, Godfroy Anne, Cambon-Bonavita Marie-Anne (2015). Microbial communities associated with benthic faunal assemblages at cold seep sediments of the Sonora Margin, Guaymas Basin . Frontiers In Marine Science , 2(53), 1-16 . Publisher's official version : https://doi.org/10.3389/fmars.2015.00053 , Open Access version : https://archimer.ifremer.fr/doc/00288/39889/

Vigneron Adrien, Cruaud Perrine, Pignet Patricia, Caprais Jean-Claude, Gayet Nicolas, Cambon-Bonavita Marie-Anne, Godfroy Anne, Toffin Laurent (2014). Bacterial communities and syntrophic associations involved in anaerobic oxidation of methane process of the Sonora Margin cold seeps, Guaymas Basin . Environmental Microbiology , 16(9), 2777-2790 . Publisher's official version : https://doi.org/10.1111/1462-2920.12324 , Open Access version : https://archimer.ifremer.fr/doc/00168/27921/

Vigneron Adrien, Cruaud Perrine, Roussel Erwan, Pignet Patricia, Caprais Jean-Claude, Callac Nolwenn, Ciobanu Maria Cristina, Godfroy Anne, Cragg Barry A., Parkes John R., Van Nostrand Joy D., He Zhili, Zhou Jizhong, Toffin Laurent, Callac Nolwenn (2014). Phylogenetic and Functional Diversity of Microbial Communities Associated with Subsurface Sediments of the Sonora Margin, Guaymas Basin . Plos One , 9(8), e104427 . Publisher's official version : https://doi.org/10.1371/journal.pone.0104427 , Open Access version : https://archimer.ifremer.fr/doc/00203/31408/

Vigneron Adrien, Cruaud Perrine, Pignet Patricia, Caprais Jean-Claude, Cambon-Bonavita Marie-Anne, Godfroy Anne, Toffin Laurent (2013). Archaeal and anaerobic methane oxidizer communities in the Sonora Margin cold seeps, Guaymas Basin (Gulf of California) . Isme Journal , 7(8), 1595-1608 . Publisher's official version : https://doi.org/10.1038/ismej.2013.18 , Open Access version : https://archimer.ifremer.fr/doc/00152/26295/

Ruffine Livio, Caprais Jean-Claude, Bayon Germain, Riboulot Vincent, Donval Jean-Pierre, Etoubleau Joel, Birot Dominique, Pignet Patricia, Rongemaille Emmanuelle, Chazallon Bertrand, Grimaud Sylvie, Adamy Jerome, Charlou Jean-Luc, Voisset Michel (2013). Investigation on the geochemical dynamics of a hydrate-bearing pockmark in the Niger Delta . Marine And Petroleum Geology , 43, 297-309 . Publisher's official version : https://doi.org/10.1016/j.marpetgeo.2013.01.008 , Open Access version : https://archimer.ifremer.fr/doc/00139/24981/

Ciobanu Maria Cristina, Rabineau Marina, Droz Laurence, Revillon Sidonie, Ghiglione J. -F., Dennielou Bernard, Jorry Stephan, Kallmeyer J., Etoubleau Joel, Pignet Patricia, Crassous Philippe, Vandenabeele-Trambouze Odile, Laugier J., Guegan Matthieu, Godfroy Anne, Alain Karine (2012). Sedimentological imprint on subseafloor microbial communities in Western Mediterranean Sea Quaternary sediments . Biogeosciences , 9(9), 3491-3512 . Publisher's official version : https://doi.org/10.5194/bg-9-3491-2012 , Open Access version : https://archimer.ifremer.fr/doc/00090/20171/

Lazar Cassandre Sara, Dinasquet Julie, L'Haridon Stephane, Pignet Patricia, Toffin Laurent (2011). Distribution of anaerobic methane-oxidizing and sulfate-reducing communities in the G11 Nyegga pockmark, Norwegian Sea . Antonie Van Leeuwenhoek International Journal Of General And Molecular Microbiology , 100(4), 639-653 . https://doi.org/10.1007/s10482-011-9620-z

Lazar Cassandre Sara, L'Haridon Stephane, Pignet Patricia, Toffin Laurent (2011). Archaeal Populations in Hypersaline Sediments Underlying Orange Microbial Mats in the Napoli Mud Volcano . Applied And Environmental Microbiology , 77(9), 3120-3131 . Publisher's official version : https://doi.org/10.1128/AEM.01296-10 , Open Access version : https://archimer.ifremer.fr/doc/00035/14589/

Ciobanu Maria Cristina, Ghiglione J.F., Kallmeyer J., Etoubleau Joel, Pignet Patricia, Crassous Philippe, Jorry Stephan, Dennielou Bernard, Godfroy Anne, Rabineau Marina, Droz Laurence, Alain Karine (2011). Do the chemo-lithostratigraphic constraints and paleoenvironmental conditions of sedimentary deposits have an effect on the structure or the composition of microbial communities? The example of the Western Mediterranean Sea . Debi Resarch Coordination Network Meeting, Deep Biosphere Sediment Microbiology, 7-9 March 2011, Chapel Hill, North Carolina .

Lazar Cassandre Sara, Dinasquet Julie, Pignet Patricia, Prieur Daniel, Toffin Laurent (2010). Active Archaeal Communities at Cold Seep Sediments Populated by Siboglinidae Tubeworms from the Storegga Slide . Microbial Ecology , 60(3), 516-527 . https://doi.org/10.1007/s00248-010-9654-1

Caprais Jean-Claude, Lanteri Nadine, Crassous Philippe, Noel Philippe, Bignon Laurent, Rousseaux Patrick, Pignet Patricia, Khripounoff Alexis (2010). A new CALMAR benthic chamber operating by submersible: First application in the cold-seep environment of Napoli mud volcano (Mediterranean Sea) . Limnology And Oceanography-methods , 8, 304-312 . https://doi.org/10.4319/lom.2010.8.304

Postec Anne, Lesongeur Francoise, Pignet Patricia, Ollivier B, Querellou Joel, Godfroy Anne (2007). Continuous enrichment cultures: insights into prokaryotic diversity and metabolic interactions in deep-sea vent chimneys . Extremophiles , 11(6), 747-757 . Publisher's official version : https://doi.org/10.1007/s00792-007-0092-z , Open Access version : https://archimer.ifremer.fr/doc/00000/3885/

Postec Anne, Le Breton Claire, Fardeau Marie-Laure, Lesongeur Francoise, Pignet Patricia, Querellou Joel, Ollivier Bernard, Godfroy Anne (2005). Marinitoga hydrogenitolerans sp nov., a novel member of the order Thermotogales isolated from a black smoker chimney on the Mid-Atlantic Ridge . International journal of systematic and evolutionary microbiology , 55(2005), 1217-1221 . Publisher's official version : https://doi.org/10.1099/ijs.0.63550-0 , Open Access version : https://archimer.ifremer.fr/doc/00000/363/

Toffin Laurent, Zink Klaus, Kato Chiaki, Pignet Patricia, Bidault Adeline, Bienvenu Nadège, Birrien Jean-Louis, Prieur Daniel (2005). Marinilactibacillus piezotolerans sp nov., a novel marine lactic acid bacterium isolated from deep sub-seafloor sediment of the Nankai Trough . International journal of systematic and evolutionary microbiology , 55(1), 345-351 . Publisher's official version : https://doi.org/10.1099/ijs.0.63236-0 , Open Access version : https://archimer.ifremer.fr/doc/00000/592/

Postec Anne, Pignet Patricia, Cueff-Gauchard Valerie, Schmitt Anne, Querellou Joel, Godfroy Anne (2005). Optimisation of growth conditions for continuous culture of the hyperthermophilic archaeon Thermococcus hydrothermalis and development of sulphur-free defined and minimal media . Research in Microbiology , 156(1), 82-87 . Publisher's official version : https://doi.org/10.1016/j.resmic.2004.08.001 , Open Access version : https://archimer.ifremer.fr/doc/00000/365/

Toffin Laurent, Bidault Adeline, Pignet Patricia, Tindall Brian, Slobodkin Alexander, Kato Chiaki, Prieur Daniel (2004). Shewanella profunda sp nov., isolated from deep marine sediment of the Nankai Trough . International journal of systematic and evolutionary microbiology , 54(6), 1943-1949 . Publisher's official version : https://doi.org/10.1099/ijs.0.03007-0 , Open Access version : https://archimer.ifremer.fr/doc/00000/590/

Urios Laurent, Cueff-Gauchard Valerie, Pignet Patricia, Postec Anne, Fardeau Marie-Laure, Ollivier Bernard, Barbier Georges (2004). Thermosipho atlanticus sp nov., a novel member of the Thermotogales isolated from a Mid-Atlantic Ridge hydrothermal vent . International journal of systematic and evolutionary microbiology , 54(2004), 1953-1957 . Publisher's official version : https://doi.org/10.1099/ijs.0.63069-0 , Open Access version : https://archimer.ifremer.fr/doc/00000/362/

Urios Laurent, Cueff Valerie, Pignet Patricia, Barbier Georges (2004). Tepidibacter formicigenes sp nov., a novel spore-forming bacterium isolated from a Mid-Atlantic Ridge hydrothermal vent . International journal of systematic and evolutionary microbiology , 54, 439-443 . Publisher's official version : https://doi.org/10.1099/ijs.0.02836-0 , Open Access version : https://archimer.ifremer.fr/doc/00000/589/

Cambon-Bonavita Marie-Anne, Lesongeur Francoise, Pignet Patricia, Wery Nathalie, Lambert Christian, Godfroy Anne, Querellou Joel, Barbier Georges (2003). Thermococcus atlanticus sp. nov., a hyperthermophilic Archaeon isolated from a deep-sea hydrothermal vent in the Mid-Atlantic Ridge (vol 7, pg 101, 2003) . Extremophiles , 7(4), 339-339 . https://doi.org/10.1007/s00792-003-0343-6

Cambon-Bonavita Marie-Anne, Lesongeur Francoise, Pignet Patricia, Wery Nathalie, Lambert Christian, Godfroy Anne, Querellou Joel, Barbier Georges (2003). Extremophiles, Thermophily section, species description Thermococcus atlanticas sp nov., a hyperthermophilic Archaeon isolated from a deep-sea hydrothermal vent in the Mid-Atlantic Ridge . Extremophiles , 7(2), 101-109 . https://doi.org/10.1007/s00792-002-0301-8

Alain Karine, Querellou Joel, Lesongeur Francoise, Pignet Patricia, Crassous Philippe, Raguenes Gerard, Cueff Valerie, Cambon-Bonavita Marie-Anne (2002). Caminibacter hydrogeniphilus gen. nov., sp nov., a novel thermophilic, hydrogen-oxidizing bacterium isolated from an East Pacific Rise hydrothermal vent . International Journal Of Systematic And Evolutionary Microbiology , 52, 1317-1323 . https://doi.org/10.1099/ijs.0.02195-0

Alain Karine, Pignet Patricia, Zbinden M, Quillevere M, Duchiron F, Donval Jean-Pierre, Lesongeur Francoise, Raguenes Gerard, Crassous Philippe, Querellou Joel, Cambon-Bonavita Marie-Anne (2002). Caminicella sporogenes gen. nov., sp nov., a novel thermophilic spore-forming bacterium isolated from an East-Pacific Rise hydrothermal vent . International journal of systematic and evolutionary microbiology , 52, 1621-1628 . Publisher's official version : https://doi.org/10.1099/ijs.0.02142-0 , Open Access version : https://archimer.ifremer.fr/doc/00000/528/

Wery Nathalie, Moricet Jean-Marc, Cueff Valerie, Jean Joelle, Pignet Patricia, Lesongeur Francoise, Cambon-Bonavita Marie-Anne, Barbier Georges (2001). Caloranaerobacter azorensis gen. nov., sp nov., an anaerobic thermophilic bacterium isolated from a deep-sea hydrothermal vent . International journal of systematic and evolutionary microbiology , 51, 1789-1796 . Open Access version : https://archimer.ifremer.fr/doc/00000/586/

Wery Nathalie, Lesongeur Francoise, Pignet Patricia, Derennes Veronique, Cambon-Bonavita Marie-Anne, Godfroy Anne, Barbier Georges (2001). Marinitoga camini gen, nov., sp nov., a rod-shaped bacterium belonging to the order Thermotogales, isolated from a deep-sea hydrothermal vent . International journal of systematic and evolutionary microbiology , 51, 495-504 . Open Access version : https://archimer.ifremer.fr/doc/00000/587/

Guezennec Jean, Pignet Patricia, Lijour Y, Gentric E, Ratiskol Jacqueline, Colliec-Jouault Sylvia (1998). Sulfation and depolymerization of a bacterial exopolysaccharide of hydrothermal origin . Carbohydrate Polymers , 37(1), 19-24 . https://doi.org/10.1016/S0144-8617(98)00006-X

Raguenes Gerard, Christen Richard, Guezennec Jean, Pignet Patricia, Barbier Georges (1997). Vibrio diabolicus sp. nov., a new polysaccharide-secreting organism isolated from a deep-sea hydrothermal vent polychaete annelid, Alvinella pompejana . International Journal Of Systematic Bacteriology , 47(4), 989-995 . https://doi.org/10.1099/00207713-47-4-989

Raguenes Gerard, Peres Armande, Ruimy R, Pignet Patricia, Christen R, Loaec M, Rougeaux H, Barbier Georges, Guezennec Jean (1997). Alteromonas infernus sp nov, a new polysaccharide-producing bacterium isolated from a deep-sea hydrothermal vent . Journal Of Applied Microbiology , 82(4), 422-430 . https://doi.org/10.1046/j.1365-2672.1997.00125.x

Raguenes Gerard, Pignet Patricia, Gauthier Gilles, Peres Armande, Christen Richard, Rougeaux Hélène, Barbier Georges, Guezennec Jean (1996). Description of a new polymer-secreting bacterium from a deep-sea hydrothermal vent, Alteromonas macleodii subsp fijiensis, and preliminary characterization of the polymer . Applied And Environmental Microbiology , 62(1), 67-73 .

Vincent P, Pignet Patricia, Talmont F, Bozzi L, Fournet B, Guezennec J, Jeanthon C, Prieur D (1994). Production and Characterization of an Exopolysaccharide Excreted by a Deep-Sea Hydrothermal Vent Bacterium Isolated from the Polychaete Annelid Alvinella pompejana . Applied And Environmental Microbiology , 60(11), 4134-4141 .

Guezennec Jean, Pignet Patricia, Raguenes Gerard, Deslandes Eric, Lijour Y, Gentric E (1994). Preliminary chemical characterization of unusual eubacterial exopolysaccharides of deep-sea origin . Carbohydrate Polymers , 24(4), 287-294 . https://doi.org/10.1016/0144-8617(94)90073-6

Marchand Michel, Caprais Jean-Claude, Pignet Patricia, Porot V (1989). Les polluants organiques dans les effluents urbains et apports polluants dans millieu marin. cas du littoral Francais . Water Research , 23(4), 461-470 . https://doi.org/10.1016/0043-1354(89)90137-1

Marchand Michel, Caprais Jean-Claude, Pignet Patricia (1988). Hydrocarbons and halogenated hydrocarbons in coastal waters of the western Mediterranean (France) . Marine Environmental Research , 25(2), 131-159 . https://doi.org/10.1016/0141-1136(88)90008-6

Marchand Michel, Pignet Patricia, Dupuis F. (1984). Analyse des hydrocarbures aromatiques dans les sédiments par spectrofluorimétrie U.V.

Bodennec Guy, Pignet Patricia, Caprais Jean-Claude (1983). Le Tanio : suivi chimique de la pollution pétrolière dans l'eau et les sédiments, mars 1980 - août 1981 . Publications du Centre National pour l'Exploitation des Océans (CNEXO), Série Rapports scientifiques et techniques, n° 52, 1983 ISSN 0339-2899 . https://archimer.ifremer.fr/doc/00000/4938/

Bodennec Guy, Pignet Patricia, Caprais Jean-Claude (1981). Suivi chimique de la pollution par les hydrocarbures du pétrolier Tanio dans l'eau de mer et les sédiments - Mars 1980 - Août 1981 . https://archimer.ifremer.fr/doc/00081/19229/

Marchand Michel, D'Ozouville Laurent (1979). Etude de la pollution par les hydrocarbures de l'"Amoco Cadiz" des sediments des baies de Morlaix et de Lannion. Etude CNEXO/NOAA .