Chevignon Germain, Dotto-Maurel Aurelie, Lecadet Cyrielle (2024). New draft genome of the protozoan parasite Bonamia ostreae. IFREMER. https://doi.org//10.12770/54aa1287-873b-4e5e-9577-2060fd816335

Dotto-Maurel Aurélie, Pelletier Camille, Degremont Lionel, Heurtebise Serge, Morga Benjamin, Chevignon Germain (2024). Evaluation of long-read sequencing for Ostreid herpesvirus type 1 genome characterization from host infected tissues, 2024. IFREMER. https://doi.org//10.12770/1a301465-aee7-42c2-a950-7708f422a6aa

Patel Vilas, Lynn‐bell Nicole, Chevignon Germain, Kucuk Roy A., Higashi Clesson H. V., Carpenter Melissa, Russell Jacob A., Oliver Kerry M. (2023). Mobile elements create strain‐level variation in the services conferred by an aphid symbiont . Environmental Microbiology , 25(12), 3333-3348 . Publisher's official version : https://doi.org/10.1111/1462-2920.16520 , Open Access version : https://archimer.ifremer.fr/doc/00857/96919/

Siano Raffaele, Arzul Isabelle, Gourmelon Michele, Le Guyader Soizick, Durand Patrick, Serghine Joelle, Parnaudeau Sylvain, Quere Julien, Schmitt Sophie, Francoise Sylvaine, Mary Charlotte, Hernandez Farinas Tania, Terre Terrillon Aouregan, Lebrun Luc, Chomerat Nicolas, Seugnet Jean-Luc, Pepin Jean-Francois, Felix Christine, Serais Ophelie, Gobet Angélique, Chevalier Mathieu, Chevignon Germain, Lecadet Cyrielle, Morga Benjamin, Piquet Jean-Come, Lemoine Maud, Leroi Laura, Noel Cyril (2023). Coastal microbiomes in riverine ecosystems of the French coastline: the ROME project . ISEEMPD 2022 - International Symposium on Ecology and Evolution of Marine Parasites and Diseases. 15-18 November 2022 .

Munusamy Ajithkumar, Benabdelmouna Abdellah, Chevignon Germain, Degremont Lionel (2023). Investigation Of Abnormal Mass Mortality (AMM) Of Mussels In France . Colloque des doctorant.es de 2e année. Université de La Rochelle. 21 septembre 2023 .

Ifremer. Laboratoire de Génétique et Pathologie des Mollusques (2023). Report of the 2023 Annual Meeting and 14th Technical Workshop of National Reference Laboratories for Mollusc Diseases. La Tremblade, France, 3rd-5th of May 2023 .

Battistel Clementine, Mouren Jean Christophe, Morga Benjamin, Pelletier Camille, Canier Lydie, Garcia Celine, Arzul Isabelle, Leroi Laura, Durand Patrick, Chevignon Germain, Jacquot Maude (2023). MoPSeq-DB. Molluscs Pathogen Sequences DataBase . JOBIM 2023 - Journées Ouvertes en Biologie, Informatique et Mathématiques. 27 au 30 juin 2023, Nancy .

Siano Raffaele, Arzul Isabelle, Gourmelon Michele, Le Guyader Soizick, Durand Patrick, Serghine Joelle, Parnaudeau Sylvain, Quere Julien, Schmitt Sophie, Francoise Sylvaine, Mary Charlotte, Hernandez Farinas Tania, Terre Terrillon Aouregan, Lebrun Luc, Chomerat Nicolas, Seugnet Jean-Luc, Pepin Jean-Francois, Felix Christine, Serais Ophelie, Gobet Angélique, Chevalier Mathieu, Chevignon Germain, Lecadet Cyrielle, Morga Benjamin, Piquet Jean-Come, Lemoine Maud, Leroi Laura, Noel Cyril (2023). Coastal microbiomes in estuarine ecosystems of France: the eDNA network ROME . ASLO - Aquatic Sciences Meeting 2023 "Resilience and Recovery in Aquatic Systems". 4-9 June 2023, Palma de Mallorca, Spain.

Canier Lydie, Chollet Bruno, Serpin Delphine, Noyer Mathilde, Nadeau Aurelie, Lecadet Cyrielle, Jacquot Maude, Chevignon Germain, Garcia Celine, Arzul Isabelle (2023). EURL for mollusc diseases : 2022 activities & perspectives . 2023 Annual Meeting of National Reference Laboratories for Mollusc Diseases, La Tremblade, France, 3-5th of May 2023 .

Higashi Clesson H. V., Nichols William L., Chevignon Germain, Patel Vilas, Allison Suzanne E., Kim Kyungsun Lee, Strand Michael R., Oliver Kerry M. (2023). An aphid symbiont confers protection against a specialized RNA virus, another increases vulnerability to the same pathogen . Molecular Ecology , 32(4), 936-950 . Publisher's official version : https://doi.org/10.1111/mec.16801 , Open Access version : https://archimer.ifremer.fr/doc/00816/92847/

Dotto-Maurel Aurelie, Pelletier Camille, Morga Benjamin, Jacquot Maude, Faury Nicole, Dégremont Lionel, Bereszczynki Maëlis, Delmotte Jean, Escoubas Jean-Michel, Chevignon Germain (2022). Evaluation of tangential flow filtration coupled to long-read sequencing for ostreid herpesvirus type 1 genome assembly . Microbial Genomics , 8(11), 000895 (17p.) . Publisher's official version : https://doi.org/10.1099/mgen.0.000895 , Open Access version : https://archimer.ifremer.fr/doc/00804/91607/

Jacquot Maude, Mouren Jean Christophe, Battistel Clementine, Morga Benjamin, Pelletier Camille, Canier Lydie, Garcia Celine, Arzul Isabelle, Leroi Laura, Durand Patrick, Chevignon Germain (2022). MoPSeq-DB: a web platform to share, visualise and analyse sequence data of mollusc pathogens . ISEEMPD 2022 - International Symposium on Ecology and Evolution of Marine Parasites and Diseases. 15-18 November 2022, La Rochelle, France . https://archimer.ifremer.fr/doc/00827/93932/

Chevignon Germain, Dotto-Maurel Aurelie, Serpin Delphine, Chollet Bruno, Arzul Isabelle (2022). De Novo Transcriptome Assembly and Analysis of the Flat Oyster Pathogenic Protozoa Bonamia Ostreae . Frontiers In Cellular And Infection Microbiology , 12, 921136 (14p.) . Publisher's official version : https://doi.org/10.3389/fcimb.2022.921136 , Open Access version : https://archimer.ifremer.fr/doc/00787/89874/

Canier Lydie, Chollet Bruno, Noyer Mathilde, Serpin Delphine, Nadeau Aurelie, Lecadet Cyrielle, Travers Agnes, Jacquot Maude, Chevignon Germain, Garcia Celine, Arzul Isabelle (2022). EURL for mollusc diseases : 2021 activities & perspectives . 2022 Annual Meeting of National Reference Laboratories for Mollusc Diseases. 28-29th of March 2022, online meeting .

Mouren Jean Christophe (2022). MoPSeq-DB: une plateforme web pour partager, visualiser et analyser des données de séquences d'agents pathogènes de mollusques . Rapport d'alternance de Master 2, parcours Ingénierie Bioinformatique. Université de Nantes .

Boyd Bret M., Chevignon Germain, Patel Vilas, Oliver Kerry M., Strand Michael R. (2021). Evolutionary genomics of APSE: a tailed phage that lysogenically converts the bacterium Hamiltonella defensa into a heritable protective symbiont of aphids . Virology Journal , 18(1), 219 (18p.) . Publisher's official version : https://doi.org/10.1186/s12985-021-01685-y , Open Access version : https://archimer.ifremer.fr/doc/00733/84530/

Morga Benjamin, Jacquot Maude, Pelletier Camille, Chevignon Germain, Dégremont Lionel, Biétry Antoine, Pepin Jean-Francois, Heurtebise Serge, Escoubas Jean Michel, Bean Tim P., Rosani Umberto, Bai Chang-Ming, Renault Tristan, Lamy Jean-Baptiste (2021). Genomic Diversity of the Ostreid Herpesvirus Type 1 Across Time and Location and Among Host Species . Frontiers In Microbiology , 12, 711377 (13p.) . Publisher's official version : https://doi.org/10.3389/fmicb.2021.711377 , Open Access version : https://archimer.ifremer.fr/doc/00706/81762/

Chevignon Germain, Foray Vincent, Pérez-Jiménez Mercedes Maria, Libro Silvia, Chung Matthew, Foster Jeremy M., Landmann Frédéric (2021). Dual RNAseq analyses at soma and germline levels reveal evolutionary innovations in the elephantiasis-agent Brugia malayi, and adaptation of its Wolbachia endosymbionts . Plos Neglected Tropical Diseases , 15(1), e0008935 (26p.) . Publisher's official version : https://doi.org/10.1371/journal.pntd.0008935 , Open Access version : https://archimer.ifremer.fr/doc/00668/77991/

Patel Vilas, Chevignon Germain, Manzano-Marin Alejandro, Brandt Jayce W., Strand Michael R., Russell Jacob A., Oliver Kerry M. (2019). Cultivation-Assisted Genome of Candidatus Fukatsuia symbiotica; the Enigmatic "X-Type" Symbiont of Aphids . Genome Biology And Evolution , 11(12), 3510-3522 . Publisher's official version : https://doi.org/10.1093/gbe/evz252 , Open Access version : https://archimer.ifremer.fr/doc/00635/74663/

Chevignon Germain, Periquet Georges, Gyapay Gabor, Vega-Czarny Nathalie, Musset Karine, Drezen Jean-Michel, Huguet Elisabeth (2018). Cotesia congregata Bracovirus Circles Encoding PTP and Ankyrin Genes Integrate into the DNA of Parasitized Manduca sexta Hemocytes . Journal Of Virology , 92(15), e00438-18 (21p.) . https://doi.org/10.1128/JVI.00438-18

Chevignon Germain, Boyd Bret M., Brandt Jayce W., Oliver Kerry M., Strand Michael R. (2018). Culture-Facilitated Comparative Genomics of the Facultative Symbiont Hamiltonella defensa . Genome Biology And Evolution , 10(3), 786-802 . Publisher's official version : https://doi.org/10.1093/gbe/evy036 , Open Access version : https://archimer.ifremer.fr/doc/00635/74665/

Brandt Jayce W., Chevignon Germain, Oliver Kerry M., Strand Michael R. (2017). Culture of an aphid heritable symbiont demonstrates its direct role in defence against parasitoids . Proceedings Of The Royal Society B-biological Sciences , 284(1866), 20171925 (9p.) . https://doi.org/10.1098/rspb.2017.1925

Kanost Michael R., Arrese Estela L., Cao Xiaolong, Chen Yun-Ru, Chellapilla Sanjay, Goldsmith Marian R., Grosse-Wilde Ewald, Heckel David G., Herndon Nicolae, Jiang Haobo, Papanicolaou Alexie, Qu Jiaxin, Soulages Jose L., Vogel Heiko, Walters James, Waterhouse Robert M., Ahn Seung-Joon, Almeida Francisca C., An Chunju, Aqrawi Peshtewani, Bretschneider Anne, Bryant William B., Bucks Sascha, Chao Hsu, Chevignon Germain, Christen Jayne M., Clarke David F., Dittmer Neal T., Ferguson Laura C. F., Garavelou Spyridoula, Gordon Karl H. J., Gunaratna Ramesh T., Han Yi, Hauser Frank, He Yan, Heidel-Fischer Hanna, Hirsh Ariana, Hu Yingxia, Jiang Hongbo, Kalra Divya, Klinner Christian, Konig Christopher, Kovar Christie, Kroll Ashley R., Kuwar Suyog S., Lee Sandy L., Lehman Rudiger, Li Kai, Li Zhaofei, Liang Hanquan, Lovelace Shanna, Lu Zhiqiang, Mansfield Jennifer H., McCulloch Kyle J., Mathew Tittu, Morton Brian, Muzny Donna M., McCulloch Kyle J., Mathew Tittu, Morton Brian, Muzny Donna M., Neunemann David, Ongeri Fiona, Pauchet Yannick, Pu Ling -Ling, Pyrousis Ioannis, Rao Xiang -Jun, Redding Amanda, Roesel Charles, Sanchez-Gracia Alejandro, Schaack Sarah, Shukla Aditi, Tetreau Guillaume, Wang Yang, Xiong Guang-Hua, Traut Walther, Walsh Tom K., Worley Kim C., Wu Di, Wu Wenbi, Wu Yuan-Qing, Zhang Xiufeng, Zou Zhen, Zucker Hannah, Briscoe Adriana D., Burmester Thorsten, Clem Rollie J., Feyereisen Rene, Grimmelikhuijzen Cornelis J. P., Hamodrakas Stavros J., Hansson Bill S., Huguet Elisabeth, Jermiin Lars S., Lan Que, Lehman Herman K., Lorenzen Marce, Merzendorfer Hans, Michalopoulos Ioannis, Morton David B., Muthukrishnan Subbaratnam, Oakeshott John G., Palmer Will, Park Yoonseong, Passarelli A. Lorena, Rozas Julio, Schwartz Lawrence M., Smith Wendy, Southgate Agnes, Vilcinskas Andreas, Vogt Richard, Wang Ping, Werren John, Yu Xiao-Qiang, Zhou Jing-Jiang, Brown Susan J., Scherer Steven E., Richards Stephen, Blissard Gary W. (2016). Multifaceted biological insights from a draft genome sequence of the tobacco hornworm moth, Manduca sexta . Insect Biochemistry And Molecular Biology , 76, 118-147 . Publisher's official version : https://doi.org/10.1016/j.ibmb.2016.07.005 , Open Access version : https://archimer.ifremer.fr/doc/00635/74667/

Chevignon Germain, Cambier Sebastien, Da Silva Corinne, Poulain Julie, Drezen Jean-Michel, Huguet Elisabeth, Moreau Sebastien J. M. (2015). Transcriptomic response of Manduca sexta immune tissues to parasitization by the bracovirus associated wasp Cotesia congregata . Insect Biochemistry And Molecular Biology , 62, 86-99 . https://doi.org/10.1016/j.ibmb.2014.12.008

Chevignon Germain (2014). Impact moléculaire et physiologique de la guêpe parasitoïde Cotesia congregata et de son polydnavirus sur l'insecte hôte Manduca sexta . PhD Thesis , Uuniversité de Tours . https://archimer.ifremer.fr/doc/00634/74649/

Drezen Jean-Michel, Chevignon Germain, Louis Faustine, Huguet Elisabeth (2014). Origin and evolution of symbiotic viruses associated with parasitoid wasps . Current Opinion In Insect Science , 6, 35-43 . https://doi.org/10.1016/j.cois.2014.09.008

Chevignon Germain, Theze Julien, Cambier Sebastien, Poulain Julie, Da Silva Corinne, Bezier Annie, Musset Karine, Moreau Sebastien J. M., Drezen Jean-Michel, Huguet Elisabeth (2014). Functional Annotation of Cotesia congregata Bracovirus: Identification of Viral Genes Expressed in Parasitized Host Immune Tissues . Journal Of Virology , 88(16), 8795-8812 . https://doi.org/10.1128/JVI.00209-14