Michele Gourmelon

Michele Gourmelon

Laboratoire d'Ecologie Pélagique (PDG-ODE-DYNECO-PELAGOS)

Contact par courriel

02 98 22 45 76

Employeur : Ifremer

Site : Brest

Adresse postale : Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané

URL : https://annuaire.ifremer.fr/cv/16093/

ORCID orcid icon : 0000-0003-1654-0960



Gourmelon Michele, Boukerb Amine M., Nabi Nesrine, Banerji Sangeeta, Joensen Katrine G., Serghine Joelle, Cormier Alexandre, Megraud Francis, Lehours Philippe, Alter Thomas, Ingle Danielle J., Kirk Martyn D., Nielsen Eva M. (2022). Genomic Diversity of Campylobacter lari Group Isolates from Europe and Australia in a One Health Context . Applied And Environmental Microbiology , 88(23), 21p. https://doi.org/10.1128/aem.01368-22
Urvoy Marion, Gourmelon Michele, Serghine Joelle, Rabiller Emilie, L Helguen Stephane, Labry Claire (2022). Free-living and particle-attached bacterial community composition, assembly processes and determinants across spatiotemporal scales in a macrotidal temperate estuary . Scientific Reports , 12(1), 13897 (14p.) . Publisher's official version : https://doi.org/10.1038/s41598-022-18274-w , Open Access version : https://archimer.ifremer.fr/doc/00788/90027/


Gourmelon Michele, Blanch Anicet R, Reischer Georg H (2021). Editorial: Microbial Source Tracking . Frontiers In Microbiology , 12, 795564 (3p.) . Publisher's official version : https://doi.org/10.3389/fmicb.2021.795564 , Open Access version : https://archimer.ifremer.fr/doc/00735/84736/
Urvoy Marion, Lami Raphael, Dreanno Catherine, Daudé David, Rodrigues Alice M S, Gourmelon Michele, L'Helguen Stephane, Labry Claire (2021). Quorum sensing disruption regulates hydrolytic enzyme and biofilm production in estuarine bacteria . Environmental Microbiology , 23(11), 7183-7200 . Publisher's official version : https://doi.org/10.1111/1462-2920.15775 , Open Access version : https://archimer.ifremer.fr/doc/00723/83499/
Gourmelon Michele, Siano Raffaele, Jeanthon Christian, Garnier Matthieu, Malo Florent, Noel Cyril, Serghine Joelle, Philippe Aurelie, Hafdane Katouar, Vitre Thomas, Briand Enora (2021). History of a couple: Alexandrium minutum and its associated bacterium in both natural and cultivated populations . ICHA 2021 - 19th International Conference on Harmful Algae. October 10-15, Mexico .
Boukerb Mohamed, Noël Cyril, Quenot Emmanuelle, Cadiou Bernard, Chevé Julien, Quintric Laure, Cormier Alexandre, Dantan Luc, Gourmelon Michele (2021). Comparative Analysis of Fecal Microbiomes From Wild Waterbirds to Poultry, Cattle, Pigs, and Wastewater Treatment Plants for a Microbial Source Tracking Approach . Frontiers In Microbiology , 12, 697553 (21p.) . Publisher's official version : https://doi.org/10.3389/fmicb.2021.697553 , Open Access version : https://archimer.ifremer.fr/doc/00705/81692/
Cadel-Six Sabrina, Cherchame Emeline, Douarre Pierre-Emmanuel, Tang Yue, Felten Arnaud, Barbet Pauline, Litrup Eva, Banerji Sangeeta, Simon Sandra, Pasquali Federique, Gourmelon Michele, Mensah Nana, Borowiak Maria, Mistou Michel-Yves, Petrovska Liljana (2021). The Spatiotemporal Dynamics and Microevolution Events That Favored the Success of the Highly Clonal Multidrug-Resistant Monophasic Salmonella Typhimurium Circulating in Europe . Frontiers In Microbiology , 12, 651124 (16p.) . Publisher's official version : https://doi.org/10.3389/fmicb.2021.651124 , Open Access version : https://archimer.ifremer.fr/doc/00696/80854/
Garry Pascal, Le Guyader Soizick (2021). Rapport d'activités 2020. Laboratoire Santé Environnement et Microbiologie, Laboratoire National de Référence de Microbiologie des coquillages . RBE/SGMM/LSEM 21-03 . https://archimer.ifremer.fr/doc/00691/80332/
Vincent Hubert Francoise, Wacrenier Candice, Morga Benjamin, Lozach Solen, Quenot Emmanuelle, Mege Mickael, Lecadet Cyrielle, Gourmelon Michele, Hervio-Heath Dominique, Le Guyader Soizick (2021). Passive Samplers, a Powerful Tool to Detect Viruses and Bacteria in Marine Coastal Areas . Frontiers In Microbiology , 12, 631174 (12p.) . Publisher's official version : https://doi.org/10.3389/fmicb.2021.631174 , Open Access version : https://archimer.ifremer.fr/doc/00682/79375/


Gourmelon Michele, Serghine Joelle, Boukerb Mohamed, Garry Pascal (2020). Revue bibliographique : risques de contamination des coquillages par les contaminations d’origine aviaire . MAAF, Direction Générale de l’Alimentation, Bureau des Produits de la Mer et d’Eau Douce, Paris , Ref. mail du 6 mars de la DGAL , 5p., 1p., 5p. https://archimer.ifremer.fr/doc/00623/73462/
Guillier Laurent, Gourmelon Michele, Lozach Solen, Cadel-Six Sabrina, Vignaud Marie-Léone, Munck Nanna, Hald Tine, Palma Federica (2020). AB_SA: Accessory genes-Based Source Attribution – tracing the source of Salmonella enterica Typhimurium environmental strains . Microbial Genomics , 6(7), 10p. Publisher's official version : https://doi.org/10.1099/mgen.0.000366 , Open Access version : https://archimer.ifremer.fr/doc/00624/73632/
Garry Pascal, Le Guyader Soizick (2020). Rapport d’activités 2019. Laboratoire Santé Environnement et Microbiologie, Laboratoire National de Référence de Microbiologie des coquillages . RBE/SG2M/LSEM . https://archimer.ifremer.fr/doc/00615/72671/
Munck Nanna, Leekitcharoenphon Pimlapas, Litrup Eva, Kaas Rolf, Meinen Anika, Guillier Laurent, Tang Yue, Malorny Burkhard, Palma Federica, Borowiak Maria, Gourmelon Michele, Simon Sandra, Banerji Sangeeta, Petrovska Liljana, Dallman Timothy J., Hald Tine (2020). Four European Salmonella Typhimurium datasets collected to develop WGS-based source attribution methods . Scientific Data , 7(1), 75 (12p.) . Publisher's official version : https://doi.org/10.1038/s41597-020-0417-7 , Open Access version : https://archimer.ifremer.fr/doc/00612/72437/
Boukerb Amine Mohamed, Schaeffer Julien, Serghine Joelle, Carrier Gregory, Le Guyader Soizick, Gourmelon Michele (2020). Complete Genome Sequence of Campylobacter armoricus CA639, Which Carries Two Plasmids, Compiled Using Oxford Nanopore and Illumina Sequencing Technologies . Microbiology Resource Announcements , 9(1), e01309-19 (3p.) . Publisher's official version : https://doi.org/10.1128/MRA.01309-19 , Open Access version : https://archimer.ifremer.fr/doc/00600/71164/


Boukerb Amine M., Penny Christian, Serghine Joelle, Walczak Cécile, Cauchie Henry-Michel, Miller William G., Losch Serge, Ragimbeau Catherine, Mossong Joël, Mégraud Francis, Lehours Philippe, Bénéjat Lucie, Gourmelon Michele (2019). Campylobacter armoricus sp. nov., a novel member of the Campylobacter lari group isolated from surface water and stools from humans with enteric infection . International Journal Of Systematic And Evolutionary Microbiology , 69(12), 3969-3979 . Publisher's official version : https://doi.org/10.1099/ijsem.0.003836 , Open Access version : https://archimer.ifremer.fr/doc/00591/70346/
Dumont Emile, Malo Florent, Rovillon Georges-Augustin, Chomerat Nicolas, Hervio Heath Dominique, Gourmelon Michele, Durand Patrick, Quintric Laure, Siano Raffaele, Briand Enora (2019). Bacterial communities associated with Alexandrium strains: study of their structure and composition by a 16S metabarcoding approach . Mycotoxins and Phycotoxins "Risk and Regulation in a Multi-Toxin Exposure World" - Gordon Research Conference. 16-21 juin 2019, Easton, MA, USA .


Rince Alain, Baliere Charlotte, Hervio-Heath Dominique, Cozien Joelle, Lozach Solen, Parnaudeau Sylvain, Le Guyader Francoise S., Le Hello Simon, Giard Jean-Christophe, Sauvageot Nicolas, Benachour Abdellah, Strubbia Sofia, Gourmelon Michele (2018). Occurrence of Bacterial Pathogens and Human Noroviruses in Shellfish-Harvesting Areas and Their Catchments in France . Frontiers In Microbiology , 9, 2443(17p.) . Publisher's official version : https://doi.org/10.3389/fmicb.2018.02443 , Open Access version : https://archimer.ifremer.fr/doc/00461/57243/
Lapegue Sylvie, Bechemin Christian, Le Guyader Soizick, Stavrakakis Christophe, Rivet Florence (2018). Rapport d’activités 2017 de l’unité SG2M, Santé Génétique et Microbiologie des Mollusques . R.RBE/SG2M/2018-01 .
Garry Pascal, Le Guyader Soizick (2018). Rapport d’activités 2017. Laboratoire Santé Environnement et Microbiologie. Laboratoire National de Référence de Microbiologie des coquillages . https://archimer.ifremer.fr/doc/00465/57686/
Jarde Emilie, Jeanneau Laurent, Harrault Loic, Quenot Emmanuelle, Solecki Olivia, Petitjean Patrice, Lozach Solen, Cheve Julien, Gourmelon Michele (2018). Application of a microbial source tracking based on bacterial and chemical markers in headwater and coastal catchments . Science Of The Total Environment , 610-611, 55-63 . Publisher's official version : https://doi.org/10.1016/j.scitotenv.2017.07.235 , Open Access version : https://archimer.ifremer.fr/doc/00395/50597/
Ifremer (2018). Quelle(s) observation(s) et modélisation(s) associée(s) pour demain ? Rapport du groupe 3c - Réflexion stratégique 2017-2018 .


Petit Fabienne, Clermont Olivier, Delannoy Sabine, Servais Pierre, Gourmelon Michele, Fach Patrick, Oberle Kenny, Fournier Matthieu, Denamur Erick, Berthe Thierry (2017). Change in the structure of Escherichia coli population and the pattern of virulence genes along a rural aquatic continuum . Frontiers In Microbiology , 8(609), 1-14 . Publisher's official version : https://doi.org/10.3389/fmicb.2017.00609 , Open Access version : https://archimer.ifremer.fr/doc/00378/48887/
Garry Pascal, Hervio Heath Dominique, Le Guyader Soizick (2017). Rapport d’activités 2016. Laboratoire Santé Environnement et Microbiologie, Laboratoire National de Référence de Microbiologie des coquillages . https://archimer.ifremer.fr/doc/00433/54493/
Marti Romain, Ribun Sebastien, Aubin Jean-Baptiste, Colinon Celine, Petit Stephanie, Marjolet Laurence, Gourmelon Michele, Schmitt Laurent, Breil Pascal, Cottet Marylise, Cournoyer Benoit (2017). Human-Driven Microbiological Contamination of Benthic and Hyporheic Sediments of an Intermittent Peri-Urban River Assessed from MST and 16S rRNA Genetic Structure Analyses . Frontiers In Microbiology , 8(19), 1-15 . Publisher's official version : https://doi.org/10.3389/fmicb.2017.00019 , Open Access version : https://archimer.ifremer.fr/doc/00378/48886/


Baliere Charlotte, Rince A., Delannoy S., Fach P., Gourmelon Michele (2016). Molecular Profiling of Shiga Toxin-Producing Escherichia coli and Enteropathogenic E. coli Strains Isolated from French Coastal Environments . Applied And Environmental Microbiology , 82(13), 3913-3927 . Publisher's official version : https://doi.org/10.1128/AEM.00271-16 , Open Access version : https://archimer.ifremer.fr/doc/00344/45514/
Gourmelon Michele, Lozach Solen, Garry Pascal, Balliere Clémence, Sauvageot Nicolas, Le Hello Simon, Rince Alain (2016). Prevalence and characterization of Salmonella spp. in three shellfish-harvesting areas in France . I3S - International Symposium Salmonella and Salmonellosis. 6-7-8 June 2016, Saint-Malo, France . https://archimer.ifremer.fr/doc/00341/45199/
Lapegue Sylvie, Renault Tristan, Bechemin Christian, Le Guyader Soizick, Stavrakakis Christophe, Rivet Florence (2016). Rapport d'activités 2015 de l'Unité SG2M : Santé, Génétique et Microbiologie des Mollusques . https://archimer.ifremer.fr/doc/00319/43055/
Garry Pascal, Le Saux Jean-Claude, Hervio Heath Dominique, Le Guyader Soizick (2016). Rapport d’activités 2015. Laboratoire Santé Environnement et Microbiologie. Laboratoire National de Référence de Microbiologie des coquillages . https://archimer.ifremer.fr/doc/00380/49138/


Baliere Charlotte, Rince Alain, Blanco Jorge, Dahbi Ghizlane, Harei Josee, Vogeleer Philippe, Giard Jean-Christophe, Mariani-Kurkdfian- Patricia, Gourmelon Michele (2015). Prevalence and Characterization of Shiga Toxin-Producing and Enteropathogenic Escherichia coli in Shellfish-Harvesting Areas and Their Watersheds . Frontiers In Microbiology , 6, - . Publisher's official version : https://doi.org/10.3389/fmicb.2015.01356 , Open Access version : https://archimer.ifremer.fr/doc/00298/40904/
Renault Tristan, Lapegue Sylvie, Le Guyader Soizick, Hatt Philippe-Jacques, Rivet Florence (2015). Rapport d'activités 2014 de l'Unité SG2M. Santé, Génétique et Microbiologie des mollusques . https://archimer.ifremer.fr/doc/00283/39455/
Gourmelon Michele, Baliere Charlotte, Caprais Marie-Paule, Cozien Joelle, Garry Pascal, Hervio Heath Dominique, Hubert Celine, Le Saux Jean-Claude, Le Guyader Soizick, Lozach Solen, Parnaudeau Sylvain, Quenot Emmanuelle, Strubia S., Veron Antoine, Baliere Cl., Bruey Q., Giard J-C, Rince I., Jarde E., Harrault L., Jeanneau L., Petitjean P., Cheve Julien, Rince Alain (2015). Recherche de bactéries potentiellement pathogènes et de norovirus dans de zones conchylicoles de Bretagne et Normandie et leurs bassins versants. Identification des sources de contamination fécale . QSPA 2015 - Colloque Qualité et Sécurité des Produits Aquatiques, 17, 18-19 Juin 2015, Boulogne-sur-Mer .
Baliere Charlotte, Rince Alain, Thevenot Delphine, Gourmelon Michele (2015). Successful detection of pathogenic Shiga-toxin-producing Escherichia coli in shellfish, environmental waters and sediment using the ISO/TS-13136 method . Letters in Applied Microbiology , 60(4), 315-20 . Publisher's official version : https://doi.org/10.1111/lam.12386 , Open Access version : https://archimer.ifremer.fr/doc/00250/36124/


Gourmelon Michele (2014). Etude de la contamination microbiologique du milieu littoral : identification des sources de contamination fécale et évaluation de la persistance des bactéries entériques dans l'environnement . HDR. https://archimer.ifremer.fr/doc/00256/36764/


Sinigalliano Christopher D., Ervin Jared S., Van De Werfhorst Laurie C., Badgley Brian D., Balleste Elisenda, Bartkowiak Jakob, Boehm Alexandria B., Byappanahalli Muruleedhara, Goodwin Kelly D., Gourmelon Michele, Griffith John, Holden Patricia A., Jay Jenny, Layton Blythe, Lee Cheonghoon, Lee J, Meijer Wim G., Noble Rachel, Raith Meredith, Ryu Hodon, Sadowsky Michael J., Schriewer Alexander, Wang Dan, Wanless David, Whitman Richard, Wuertz Stefan, Domingo Jorge W. Santo (2013). Multi-laboratory evaluations of the performance of Catellicoccus marimammalium PCR assays developed to target gull fecal sources . Water Research , 47(18), 6883-6896 . https://doi.org/10.1016/j.watres.2013.02.059
Harwood Valerie J., Boehm Alexandria B., Sassoubre Lauren M., Vijayavel Kannappan, Stewart Jill R., Fong Theng-Theng, Caprais Marie-Paule, Converse Reagan R., Diston David, Ebdon James, Fuhrman Jed A., Gourmelon Michele, Gentry-Shields Jennifer, Griffith John F., Kashian Donna R., Noble Rachel T., Taylor Huw, Wicki Melanie (2013). Performance of viruses and bacteriophages for fecal source determination in a multi-laboratory, comparative study . Water Research , 47(18), 6929-6943 . Publisher's official version : https://doi.org/10.1016/j.watres.2013.04.064 , Open Access version : https://archimer.ifremer.fr/doc/00171/28197/
Raith Meredith R., Kelty Catherine A., Griffith John F., Schriewer Alexander, Wuertz Stefan, Mieszkin Sophie, Gourmelon Michele, Reischer Georg H., Farnleitner Andreas H., Ervin Jared S., Holden Patricia A., Ebentier Darcy L., Jay Jennifer A., Wang Dan, Boehm Alexandria B., Aw Tiong Gim, Rose J, Balleste E., Meijer W. G., Sivaganesan Mano, Shanks Orin C. (2013). Comparison of PCR and quantitative real-time PCR methods for the characterization of ruminant and cattle fecal pollution sources . Water Research , 47(18), 6921-6928 . https://doi.org/10.1016/j.watres.2013.03.061
Layton Blythe A., Cao Yiping, Ebentier Darcy L., Hanley Kaitlyn, Balleste Elisenda, Brandao Joao, Byappanahalli Muruleedhara, Converse Reagan, Farnleitner Andreas H., Gentry-Shields Jennifer, Gidley Maribeth L., Gourmelon Michele, Lee Chang Soo, Lee J, Lozach Solen, Madi Tania, Meijer Wim G., Noble Rachel, Peed Lindsay, Reischer Georg H., Rodrigues Raquel, Rose J, Schriewer Alexander, Sinigalliano Chris, Srinivasan Sangeetha, Stewart Jill, Van De Werfhorst Laurie C., Wang Dan, Whitman Richard, Wuertz Stefan, Jay Jenny, Holden Patricia A., Boehm Alexandria B., Shanks Orin, Griffith John F. (2013). Performance of human fecal anaerobe-associated PCR-based assays in a multi-laboratory method evaluation study . Water Research , 47(18), 6897-6908 . https://doi.org/10.1016/j.watres.2013.05.060
Ebentier Darcy L., Hanley Kaitlyn T., Cao Yiping, Badgley Brian D., Boehm Alexandria B., Ervin Jared S., Goodwin Kelly D., Gourmelon Michele, Griffith John F., Holden Patricia A., Kelty Catherine A., Lozach Solen, McGee Charles, Peed Lindsay A., Raith Meredith, Ryu Hodon, Sadowsky Michael J., Scott Elizabeth A., Domingo Jorge Santo, Schriewer Alexander, Sinigalliano Christopher D., Shanks Orin C., Van De Werfhorst Laurie C., Wang Dan, Wuertz Stefan, Jay Jennifer A. (2013). Evaluation of the repeatability and reproducibility of a suite of qPCR-based microbial source tracking methods . Water Research , 47(18), 6839-6848 . https://doi.org/10.1016/j.watres.2013.01.060
Mieszkin Sophie, Caprais Marie-Paule, Le Mennec Cecile, Le Goff Manon, Edge T. A., Gourmelon Michele (2013). Identification of the origin of faecal contamination in estuarine oysters using Bacteroidales and F-specific RNA bacteriophage markers . Journal Of Applied Microbiology , 115(3), 897-907 . Publisher's official version : https://doi.org/10.1111/jam.12260 , Open Access version : https://archimer.ifremer.fr/doc/00153/26426/
Mauffret Aourell, Mieszkin Sophie, Morizur Mael, Alfiansah Yustian Rovi, Lozach Solen, Gourmelon Michele (2013). Recent innovation in microbial source tracking using bacterial real-time PCR markers in shellfish . Marine Pollution Bulletin , 68(1-2), 21-29 . Publisher's official version : https://doi.org/10.1016/j.marpolbul.2012.12.029 , Open Access version : https://archimer.ifremer.fr/doc/00137/24776/
Ryu Hodon, Henson Michael, Elk Michael, Toledo-Hernandez Carlos, Griffith John, Blackwood Denene, Noble Rachel, Gourmelon Michele, Glassmeyer Susan, Domingo Jorge W. Santo (2013). Development of Quantitative PCR Assays Targeting the 16S rRNA Genes of Enterococcus spp. and Their Application to the Identification of Enterococcus Species in Environmental Samples . Applied And Environmental Microbiology , 79(1), 196-204 . https://doi.org/10.1128/AEM.02802-12
Pommepuy Monique, Derrien Annick, Le Guyader Soizick, Menard Dominique, Caprais Marie-Paule, Dubois Eric, Dupray Elisabeth, Gourmelon Michele (2013). Microbial Water Quality on a Caribbean Island (Martinique) . In Small Islands Marine Science and Sustainable Development. George A. Maul (Ed). 2013. ISBN:9780875902654. Coastal and Estuarine Studies vol.51 , chap.17, pp.284-297 (Wiley) .


Derrien M., Jarde E., Gruau G., Pourcher A. M., Gourmelon Michele, Jadas-Hecart Alain, Wickmann A. C. Pierson (2012). Origin of fecal contamination in waters from contrasted areas: Stanols as Microbial Source Tracking markers . Water Research , 46(13), 4009-4016 . Publisher's official version : https://doi.org/10.1016/j.watres.2012.05.003 , Open Access version : https://archimer.ifremer.fr/doc/00090/20133/
Mauffret Aourell, Caprais Marie-Paule, Gourmelon Michele (2012). Relevance of Bacteroidales and F-Specific RNA Bacteriophages for Efficient Fecal Contamination Tracking at the Level of a Catchment in France . Applied And Environmental Microbiology , 78(15), 5143-5152 . Publisher's official version : https://doi.org/10.1128/AEM.00315-12 , Open Access version : https://archimer.ifremer.fr/doc/00089/20009/
Jeanneau L., Solecki O., Wery N., Jarde E., Gourmelon Michele, Communal Pierre-Yves, Jadas-Hecart Alain, Caprais Marie-Paule, Gruau G., Pourcher A. -M. (2012). Relative Decay of Fecal Indicator Bacteria and Human-Associated Markers: A Microcosm Study Simulating Wastewater Input into Seawater and Freshwater . Environmental Science & Technology , 46(4), 2375-2382 . https://doi.org/10.1021/es203019y
Hervio-Heath Dominique, Gourmelon Michele, Catherine Martial (2012). Qualité microbiologique des coquillages destinés à la consommation humaine : contamination des coquillages par des bactéries pathogènes pour l’homme. Sous-région marine Golfe de Gascogne. Evaluation initiale DCSMM. MEDDE, AAMP, Ifremer , Ref. DCSMM/EI/PI/GDG/28/2012 , 8p. https://archimer.ifremer.fr/doc/00329/44061/
Hervio-Heath Dominique, Gourmelon Michele, Catherine Martial (2012). Contamination des coquillages par des bactéries pathogènes pour l’homme. Sous-région marine Méditerranée occidentale. Evaluation initiale DCSMM. MEDDE, AAMP, Ifremer , Ref. DCSMM/EI/PI/MO/28/2012 , 7p. https://archimer.ifremer.fr/doc/00331/44244/
Hervio-Heath Dominique, Gourmelon Michele, Catherine Martial (2012). Qualité microbiologique des coquillages destinés à la consommation humaine : contamination des coquillages par des bactéries pathogènes pour l’homme. Sous-région marine Mers celtiques. Evaluation initiale DCSMM. MEDDE, AAMP, Ifremer , Ref. DCSMM/EI/PI/MC/24/2012 , 5p. https://archimer.ifremer.fr/doc/00329/43977/
Pourcher A.M., Jardé E., Caprais Marie-Paule, Wéry Nathalie, Jadas-Hécart A., Communal P.Y., Jaffrezic A., Marti R., Mieszkin Sophie, Derrien M, Solecki O., Jeanneau L., Gourmelon Michele (2012). Sélection de marqueurs microbiologiques et chimiques de traçage des sources microbiennes. Application à des eaux de rivière potentiellement contaminées par des rejets ponctuels ou diffus en France / Selection of microbial and chemical markers for microbail source tracking. Application to river waters impacted by point and non point source pollution in France . Techniques Sciences Méthodes , (3), 43-54 . https://doi.org/10.1051/tsm/201203043
Pourcher Anne-Marie, Jarde Emilie, Jeanneau Laurent, Solecki Olivia, Jadas-Hecart Alain, Caprais Marie-Paule, Durand Gaëlle, Gourmelon Michele (2012). Des micro-organismes et des composés chimiques pour identifier les sources de contamination fécale : étude de leur persistance en microcosmes et de leur présence dans les eaux à l'échelle d'un bassin versant . Sciences, eaux & territoires , (9), 92-97 . Open Access version : https://archimer.ifremer.fr/doc/00315/42604/
Hervio-Heath Dominique, Gourmelon Michele, Catherine Martial (2012). Qualité microbiologique des coquillages destinés à la consommation humaine : contamination des coquillages par des bactéries pathogènes pour l’homme. Sous-région marine Manche - Mer du Nord. Evaluation initiale DCSMM. MEDDE, AAMP, Ifremer , Ref. DCSMM/EI/PI/MMN/28/2012 , 9p. https://archimer.ifremer.fr/doc/00328/43874/


Marti R., Mieszkin Sophie, Solecki O., Pourcher A. -M., Hervio-Heath Dominique, Gourmelon Michele (2011). Effect of oxygen and temperature on the dynamic of the dominant bacterial populations of pig manure and on the persistence of pig-associated genetic markers, assessed in river water microcosms . Journal Of Applied Microbiology , 111(5), 1159-1175 . Publisher's official version : https://doi.org/10.1111/j.1365-2672.2011.05131.x , Open Access version : https://archimer.ifremer.fr/doc/00053/16470/
Solecki O., Jeanneau L., Jarde E., Gourmelon Michele, Marin Charlotte, Pourcher A. M. (2011). Persistence of microbial and chemical pig manure markers as compared to faecal indicator bacteria survival in freshwater and seawater microcosms . Water Research , 45(15), 4623-4633 . Publisher's official version : https://doi.org/10.1016/j.watres.2011.06.012 , Open Access version : https://archimer.ifremer.fr/doc/00043/15417/
Jaffrezic Anne, Jarde Emilie, Pourcher Anne-Marie, Gourmelon Michele, Caprais Marie-Paule, Heddadj Djilali, Cottinet Patrice, Bilal Muhamad, Derrien Morgane, Marti Romain, Mieszkin Sophie (2011). Microbial and Chemical Markers: Runoff Transfer in Animal Manure-Amended Soils . Journal Of Environmental Quality , 40(3), 959-968 . https://doi.org/10.2134/jeq2010.0355


Gourmelon Michele, Caprais Marie-Paule, Mieszkin Sophie, Marti Romain, Wery Nathalie, Jarde E., Derrien Marc, Jadas-Hecart A., Communal P. Y., Jaffrezic A., Pourcher A. M. (2010). Development of microbial and chemical MST tools to identify the origin of the faecal pollution in bathing and shellfish harvesting waters in France . Water Research , 44(16), 4812-4824 . Publisher's official version : https://doi.org/10.1016/j.watres.2010.07.061 , Open Access version : https://archimer.ifremer.fr/doc/00016/12710/
Ifremer, Université de Nantes (2010). Gestion globale des ressources marines et des risques dans les espaces côtiers. Gerrico. Volume 1 : rapport de synthèse. Volume 2 : Fiches actions par axe . https://archimer.ifremer.fr/doc/00136/24733/
Mieszkin Sophie, Yala Jean Fabrice, Joubrel Rozenn, Gourmelon Michele (2010). Phylogenetic analysis of Bacteroidales 16S rRNA gene sequences from human and animal effluents and assessment of ruminant faecal pollution by real-time PCR . Journal Of Applied Microbiology , 108(3), 974-984 . Publisher's official version : https://doi.org/10.1111/j.1365-2672.2009.04499.x , Open Access version : https://archimer.ifremer.fr/doc/00000/11156/
Gourmelon Michele, Caprais Marie-Paule, Le Mennec Cecile, Mieszkin Sophie, Ponthoreau C., Gendronneau M. (2010). Application of library-independent microbial source tracking methods for identifying the sources of faecal contamination in coastal areas . Water Science And Technology , 61(6), 1401-1409 . Publisher's official version : https://doi.org/10.2166/wst.2010.033 , Open Access version : https://archimer.ifremer.fr/doc/00003/11384/
Gourmelon Michele, Lazure Pascal, Hervio Heath Dominique, Le Saux Jean-Claude, Caprais Marie-Paule, Le Guyader Soizick, Catherine Martial, Pommepuy Monique (2010). Microbial modelling in coastal environments and early warning systems: useful tools to limit shellfish microbial contamination . In Safe Management of Shellfish and Harvest Waters (G. Rees, K. Pond, D. Kay, J. Bartram and J. Santo Domingo) .
Gourmelon Michele, Caprais Marie-Paule, Kay D., Stapleton C. (2010). Techniques de dépistage des sources de pollution microbiennes : méthodologies, application et retour d'expériences concernant l’identification des pollutions en zones littorales en France et au Royaume- Uni . Tsm, Techniques, Sciences, Méthodes , (4), 54-64 .


Furet Jean-Pierre, Firmesse Olivier, Gourmelon Michele, Bridonneau Chantal, Tap Julien, Mondot Stanislas, Dore Joel, Corthier Gerard (2009). Comparative assessment of human and farm animal faecal microbiota using real-time quantitative PCR . Fems Microbiology Ecology , 68(3), 351-362 . Publisher's official version : https://doi.org/10.1111/j.1574-6941.2009.00671.x , Open Access version : https://archimer.ifremer.fr/doc/00000/11071/
Mieszkin Sophie, Furet Jean-Pierre, Corthier Gerard, Pommepuy Monique, Le Saux Jean-Claude, Bougeard Morgane, Hervio Heath Dominique, Gourmelon Michele (2009). Discrimination between human, pig and ruminant fecal contaminations in a river catchment by real-time PCR using host-specific markers . ICMSS09 – Nantes, France – June 2009 . https://archimer.ifremer.fr/doc/00021/13259/
Mieszkin Sophie, Furet Jean-Pierre, Corthier Gerard, Gourmelon Michele (2009). Estimation of Pig Fecal Contamination in a River Catchment by Real-Time PCR Using Two Pig-Specific Bacteroidales 16S rRNA Genetic Markers . Applied and environmental microbiology , 75(10), 3045-3054 . Publisher's official version : https://doi.org/10.1128/AEM.02343-08 , Open Access version : https://archimer.ifremer.fr/doc/00000/6493/
Caprais Marie-Paule, Le Mennec Cecile, Pommepuy Monique, Le Saux Jean-Claude, Gourmelon Michele (2009). Potential of F-specific RNA bacteriophages to discriminate sources of faecal pollution in French shellfish . ICMSS09 – Nantes, France – June 2009 . https://archimer.ifremer.fr/doc/00066/17749/


Caprais Marie-Paule, Gourmelon Michele, Le Mennec Cecile, Joubrel Rozenn (2008). Identification de l'origine de la contamination observée en baie de La Baule : Première partie de l'étude . EMP/MIC/RST05.2008 . https://archimer.ifremer.fr/doc/00622/73452/


Gawler A, Beecher J, Brandao J, Carroll N, Falcao L, Gourmelon Michele, Masterson B, Nunes B, Porter J, Rince A, Rodrigues R, Thorp M, Walters J, Meijer W (2007). Validation of host-specific Bacteriodales 16S rRNA genes as markers to determine the origin of faecal pollution in Atlantic Rim countries of the European Union . Water Research , 41(16), 3780-3784 . Publisher's official version : https://doi.org/10.1016/j.watres.2007.01.028 , Open Access version : https://archimer.ifremer.fr/doc/00000/4957/
Gourmelon Michele, Caprais Marie-Paule, Segura Raphael, Le Mennec Cecile, Lozach Solen, Piriou Jean-Yves, Rince A (2007). Evaluation of two library-independent microbial source tracking methods to identify sources of fecal contamination in french estuaries . Applied and environmental microbiology , 73(15), 4857-4866 . Publisher's official version : https://doi.org/10.1128/AEM.03003-06 , Open Access version : https://archimer.ifremer.fr/doc/00000/3535/
Le Saux Jean-Claude, Hervio Heath Dominique, Pommepuy Monique, Le Guyader Soizick (2007). Toxi-infections alimentaires collectives à coquillages et expertise crise d'Arcachon - Année 2006 . https://archimer.ifremer.fr/doc/00306/41708/
(2007) Rapport de synthèse des travaux 2007 du projet Gerrico . https://archimer.ifremer.fr/doc/00304/41515/


Gourmelon Michele (2006). Recherche des Escherichia coli producteurs de Shiga-toxines (STEC) dans l’environnement marin (coquillages) . PhD Thesis , Université de Rennes 1 . https://archimer.ifremer.fr/doc/00066/17752/
Pommepuy Monique, Hervio Heath Dominique, Caprais Marie-Paule, Gourmelon Michele, Le Saux Jean-Claude, Le Guyader Soizick (2006). Fecal contamination in coastal areas: An engineering approach . Oceans and Health: Pathogens in the Marine Environment (Book chapter) , 331-359 . Open Access version : https://archimer.ifremer.fr/doc/00000/1207/
Gourmelon Michele, Montet M, Lozach Solen, Le Mennec Cecile, Pommepuy Monique, Beutin L, Vernozy Rozand C (2006). First isolation of Shiga toxin 1d producing Escherichia coli variant strains in shellfish from coastal areas in France . Journal of Applied Microbiology , 100(1), 85-97 . Publisher's official version : https://doi.org/10.1111/j.1365-2672.2005.02753.x , Open Access version : https://archimer.ifremer.fr/doc/00000/1096/


Pommepuy Monique, Hervio Heath Dominique, Gourmelon Michele, Caprais Marie-Paule, Le Cann Pierre, Le Saux Jean-Claude, Le Guyader Soizick (2005). Emerging pathogens in coastal areas . CIESM workshop monographs , (26), 79-85 .


Gourmelon Michele (2004). Compte rendu de mission à l'étranger. WHO/USEPA Workshop Emerging issues in water and infectious disease : safe management of shellfish and harvest waters. Kuala Lumpur (Malaisie). 30 novembre - 2 décembre 2004 . DEL/MP/MIC .


Barret Jean (2003). Semaine d'Enseignement 2003. Aquaculture & Environnement. Brest, 20-23/01/2003 .
Gourmelon Michele, Montet Mp, Loaec Solen, Le Mennec Cecile, Pommepuy Monique, Vernoy-Rozand C (2003). Recherche des Escherichia coli vérotoxiques (VTEC) dont E. coli O157 : H7 dans l'environnement marin (coquillages) . https://archimer.ifremer.fr/doc/00106/21697/


Beliaeff Benoit (coord.) (2002). SEQ " Littoral ". Système de classification pour l’évaluation de la qualité des eaux littorales : grilles d’aptitude aux usages et à la biologie . Document SEQ “ Littoral ” - convention MEDD/lfremer n° 031-01 .
Gourmelon Michele, Derrien A., Crenn Isabelle, Loaec Solen (2002). Dénombrement des coliformes thermotolérants ou des Escherichia coli dans des sédiments côtiers vaseux . https://archimer.ifremer.fr/doc/00081/19213/


Alzieu Claude, Andral Bruno, Bassoulet Philippe, Gourmelon Michele, Le Quillec Régis, L'Yavanc Jacky, Quiniou Francoise (1999). Biodragages - Protocole de suivi de l'efficacité et de l'impact potentiel . DEL / ST / RST / 99.11 Séte . https://archimer.ifremer.fr/doc/00040/15121/
Alzieu Claude, Abarnou Alain, Bassoullet Philippe, Boutier Bernard, Chiffoleau Jean-Francois, Crenn Isabelle, Derrien Annick, Erard-Le Denn Evelyne, Gourmelon Michele, Guiliaud Jean-François, Silva Jacinto Ricardo, Le Cann Pierre, Le Guyader Françoise, Le Hir Pierre, L'Yavanc Jacky, Mauvais Jean-Louis, Menard Dominique, Michel Pierre, Monbet Yves, Pommepuy Monique, Quiniou Francoise (1999). Dragages et environnement marin Etat des connaissances . Ifremer. https://archimer.ifremer.fr/doc/00000/1040/


Troussellier Marc, Bonnefont Jean-Luc, Courties Claude, Derrien Annick, Dupray Elizabeth, Gauthier Michel, Gourmelon Michele, Joux Fabien, Lebaron Philippe, Martin Yvan, Pommepuy Monique (1998). Responses of enteric bacteria to environmental stresses in seawater . Oceanologica Acta , 21(6), 965-981 . Publisher's official version : https://doi.org/10.1016/S0399-1784(99)80019-X , Open Access version : https://archimer.ifremer.fr/doc/00000/845/


Gourmelon Michele, Touati D, Pommepuy Monique, Cormier M (1997). Survival of Escherichia coli exposed to visible light in seawater: analysis of rpoS-dependent effects . Canadian Journal Of Microbiology , 43(11), 1036-1043 .
Wieliczko Etienne, Gourmelon Michele, Dupray Elisabeth, Derrien A., Caprais Marie-Paule, Pommepuy Monique (1997). Mise en place d'éléments permettant le fonctionnement d'organismes stressés dans un écosystème pertubé - 2ème partie : rôle et expression du gène rpoS chez Escherichia Coli en situation de stress . https://archimer.ifremer.fr/doc/00105/21630/
Gourmelon Michele, Le Rouzic Catherine, Pommepuy Monique (1997). Mise en place d'éléments permettant le fonctionnement d'organismes stressés dans un écosystème perturbé - 1ère partie : Action désinfectante de l'ozone sur un effluent en sortie de station d'épuration.
Guillaud Jean-Francois, Derrien Annick, Gourmelon Michele, Pommepuy Monique (1997). T90 as a tool for engineers : interest and limits . Water Science And Technology , 35(11-12), 277-281 . https://doi.org/10.1016/S0273-1223(97)00272-2


Pommepuy Monique, Butin M, Derrien Annick, Gourmelon Michele, Colwell Rr, Cormier M (1996). Retention of enteropathogenicity by viable but nonculturable Escherichia coli exposed to seawater and sunlight . Applied And Environmental Microbiology , 62(12), 4621-4626 .
Pommepuy Monique, Fiksdal L, Gourmelon Michele, Melikechi H, Caprais Marie-Paule, Cormier M, Colwell Rr (1996). Effect of seawater on Escherichia coli beta-galactosidase activity . Journal Of Applied Bacteriology , 81(2), 174-180 . https://doi.org/10.1111/j.1365-2672.1996.tb04496.x


Gourmelon Michele (1995). Etude de la lumière visible comme facteur limitant de la survie de Escherichia Coli en milieu Marin . PhD Thesis , Université de Rennes . https://archimer.ifremer.fr/doc/00105/21577/


Gourmelon Michele, Cillard J, Pommepuy Monique (1994). Visible-light damage to Escherichia coli in seawater - oxidative stress hypothesis . Journal Of Applied Bacteriology , 77(1), 105-112 . https://doi.org/10.1111/j.1365-2672.1994.tb03051.x
Breton Marguerite, Caprais Marie-Paule, Derrien A., Douillet P, Dubois E, Dupray E, Gourmelon Michele, Guillerm Denise, Kempf Marc, Lazure P., Le Guyader Soizick, Le Menn Remi, Menard Dominique, Pommepuy Monique, Salomon Jean-Claude (1994). Etude de la qualité du milieu marin littoral en Martinique (Baie de Fort de France) . https://archimer.ifremer.fr/doc/00132/24303/

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