Cambon Marie-Anne, Cormier Alexandre, Aube Johanne, Cueff-Gauchard Valerie (2024). Genome of hydrothermal shrimp Rimicaris exoculata. IFREMER. https://sextant.ifremer.fr/record/e2ae7d37-cee5-4a00-b9c2-96e00099ca00/

Mazurais David, Simon Victor, Auffret Pauline, Cormier Alexandre, Dauvé Alexandra, Madec Lauriane, Tanguy Guillo Baptiste, Gayet Nicolas, Fleury Elodie, Le Luyer Jeremy (2024). Mutligenerational chronic exposure to near future ocean acidification in European sea bass (Dicentrarchus labrax): Insights into the regulation of the transcriptome in a sensory organ involved in feed intake, the tongue . Marine Environmental Research , 202, 106775 (10p.) . https://doi.org/10.1016/j.marenvres.2024.106775

Passerini Delphine, Kolypczuk Laetitia, Casanova Noemie, Macé Sabrina, Cormier Alexandre, Leroi Francoise (2024). Deciphering the bacterial interaction network within seafood microbiome to develop a sustainable biopreservation strategy . FOOD MICRO 2024 - 28th International ICFMH ( International Committee on Food Microbiology and Hygiene ) Conference. July 8-11 2024, Burgos, Spain .

Denoeud France, Godfroy Olivier, Cruaud Corinne, Heesch Svenja, Nehr Zofia, Tadrent Nachida, Couloux Arnaud, Brillet-Guéguen Loraine, Delage Ludovic, McKeown Dean, Motomura Taizo, Sussfeld Duncan, Fan Xiao, Mazéas Lisa, Terrapon Nicolas, Barrera-Redondo Josué, Petroll Romy, Reynes Lauric, Choi Seok-Wan, Jo Jihoon, Uthanumallian Kavitha, Bogaert Kenny, Duc Céline, Ratchinski Pélagie, Lipinska Agnieszka, Noel Benjamin, Murphy Eleanor A., Lohr Martin, Khatei Ananya, Hamon-Giraud Pauline, Vieira Christophe, Akerfors Svea Sanja, Akita Shingo, Avia Komlan, Badis Yacine, Barbeyron Tristan, Belcour Arnaud, Berrabah Wahiba, Blanquart Samuel, Bouguerba-Collin Ahlem, Bringloe Trevor, Cattolico Rose Ann, Cormier Alexandre, Cruz De Carvalho Helena, Dallet Romain, de Clerck Olivier, Debit Ahmed, Denis Erwan, Destombe Christophe, Dinatale Erica, Dittami Simon, Drula Elodie, Faugeron Sylvain, Got Jeanne, Graf Louis, Groisillier Agnès, Guillemin Marie-Laure, Harms Lars, Hatchett William John, Henrissat Bernard, Hoarau Galice, Jollivet Chloé, Jueterbock Alexander, Kayal Ehsan, Kogame Kazuhiro, Le Bars Arthur, Leblanc Catherine, Ley Ronja, Liu Xi, Lopez Pascal Jean, Lopez Philippe, Manirakiza Eric, Massau Karine, Mauger Stéphane, Mest Laetitia, Michel Gurvan, Monteiro Catia, Nagasato Chikako, Nègre Delphine, Pelletier Eric, Phillips Naomi, Potin Philippe, Rensing Stefan A., Rousselot Ellyn, Rousvoal Sylvie, Schroeder Declan, Scornet Delphine, Siegel Anne, Tirichine Leila, Tonon Thierry, Valentin Klaus, Verbruggen Heroen, Weinberger Florian, Wheeler Glen, Kawai Hiroshi, Peters Akira F., Yoon Hwan Su, Hervé Cecile, Ye Naihao, Bapteste Eric, Valero Myriam, Markov Gabriel V., Corre Erwan, Coelho Susana M., Wincker Patrick, Aury Jean-Marc, Cock J. Mark . Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems . bioRxiv IN PRESS . Publisher's official version : https://doi.org/10.1101/2024.02.19.579948 , Open Access version : https://archimer.ifremer.fr/doc/00879/99116/

Sol Dourdin Thomas, Guyomard Killian, Rabiller Manuella, Houssais Nina, Cormier Alexandre, Le Monier Pauline, Sussarellu Rossana, Rivière Guillaume (2024). Ancestors’ Gift: Parental Early Exposure to the Environmentally Realistic Pesticide Mixture Drives Offspring Phenotype in a Larger Extent Than Direct Exposure in the Pacific Oyster, Crassostrea gigas . Environmental Science & Technology , 58(4), 1865-1876 . Publisher's official version : https://doi.org/10.1021/acs.est.3c08201 , Open Access version : https://archimer.ifremer.fr/doc/00872/98346/

Sauvage Thomas, Cormier Alexandre, Passerini Delphine (2023). A comparison of Oxford nanopore library strategies for bacterial genomics . Bmc Genomics , 24(1), 627 (16p.) . Publisher's official version : https://doi.org/10.1186/s12864-023-09729-z , Open Access version : https://archimer.ifremer.fr/doc/00857/96917/

Sol Dourdin Thomas, Rivière Guillaume, Cormier Alexandre, Di Poi Broussard Carole, Guyomard Killian, Rabiller Manuella, Akcha Farida, Bah Thierno Sadialiou, Le Monier Pauline, Sussarellu Rossana (2023). Molecular and phenotypic effects of early exposure to an environmentally relevant pesticide mixture in the Pacific oyster, Crassostrea gigas. Environmental Pollution , 326, 121472 (11p.) . Publisher's official version : https://doi.org/10.1016/j.envpol.2023.121472 , Open Access version : https://archimer.ifremer.fr/doc/00829/94090/

Gourmelon Michele, Boukerb Amine M., Nabi Nesrine, Banerji Sangeeta, Joensen Katrine G., Serghine Joelle, Cormier Alexandre, Megraud Francis, Lehours Philippe, Alter Thomas, Ingle Danielle J., Kirk Martyn D., Nielsen Eva M. (2022). Genomic Diversity of Campylobacter lari Group Isolates from Europe and Australia in a One Health Context . Applied And Environmental Microbiology , 88(23), 21p. Publisher's official version : https://doi.org/10.1128/aem.01368-22 , Open Access version : https://archimer.ifremer.fr/doc/00804/91613/

Passerini Delphine, Kolypczuk Laetitia, Cormier Alexandre, Sauvage Thomas, Leroi Francoise (2022). Diversité des PAMs dans le microbiote des produits de la mer . MuFoPAM 2022 - 9èmes jourénes du GDR. 19-21 octobre 2022, Amboise .

Passerini Delphine, Kolypczuk Laetitia, Cormier Alexandre, Leroi Francoise (2022). Etude des réseaux d’interactions bactériennes dans le microbiome des produits de la mer, en vue d’un procédé de biopréservation dirigé . Microbes 2022 - 17e Congrès National de la SFM « La microbiologie dans tous ses états » . 3-5 octobre 2022, Montpellier . https://archimer.ifremer.fr/doc/00813/92530/

Cohen-Rengifo Mishal, Danion Morgane, Gonzalez Anne-Alicia, Bégout Marie-Laure, Cormier Alexandre, Noël Cyril, Cabon Joëlle, Vitré Thomas, Mark Felix C., Mazurais David (2022). The extensive transgenerational transcriptomic effects of ocean acidification on the olfactory epithelium of a marine fish are associated with a better viral resistance . Bmc Genomics , 23(1), 48 (18p.) . Publisher's official version : https://doi.org/10.1186/s12864-022-08647-w , Open Access version : https://archimer.ifremer.fr/doc/00777/88898/

Sol Dourdin Thomas, Cormier Alexandre, Guyomard Killian, Rabiller Manuella, Sussarellu Rossana, Riviere Guillaume (2022). Multigenerational Effects of Early Exposure to an Environmentally Relevant Pesticide Mixture in the Pacific Oyster, C. gigas. EPIMAR 2022 - 2nd Epigenetics in Marine Biology Conference 2022. October 11-14, 2022, Woods Hole, Massachusetts, USA .

Brocard Simon, Cormier Alexandre, Noel Cyril, Berthelier Jérémy, Carrier Gregory, Sussarellu Rossana (2022). MAM : Methylation Analysis of Microalgae . JOBIM 2022 - Journées Ouvertes en Biologie, Informatique et Mathématiques. 05-08 Juillet 2022, Rennes . https://archimer.ifremer.fr/doc/00810/92184/

Sol Dourdin Thomas, Cormier Alexandre, Guyomard Killian, Rabiller Manuella, Sussarellu Rossana, Riviere Guillaume (2022). Phenotypic and molecular effects of early exposure to environmentally relevant pesticide mixture in the Pacific oyster, Crassostrea gigas . PRIMO 2021- 21st International Symposium on Pollutant Responses In Marine arine Organisms. May 22-25, 2022, Gothenburg, Sweden .

Boukerb Mohamed, Noël Cyril, Quenot Emmanuelle, Cadiou Bernard, Chevé Julien, Quintric Laure, Cormier Alexandre, Dantan Luc, Gourmelon Michele (2021). Comparative Analysis of Fecal Microbiomes From Wild Waterbirds to Poultry, Cattle, Pigs, and Wastewater Treatment Plants for a Microbial Source Tracking Approach . Frontiers In Microbiology , 12, 697553 (21p.) . Publisher's official version : https://doi.org/10.3389/fmicb.2021.697553 , Open Access version : https://archimer.ifremer.fr/doc/00705/81692/

Cohen-Rengifo Mishal, Danion Morgane, Gonzalez Anne-Alicia, Bégout Marie-Laure, Madec Lauriane, Cormier Alexandre, Noël Cyril, Cabon Joëlle, Vitré Thomas, Mark Felix C., Mazurais David (2021). The extensive intergenerational molecular effects of ocean acidification on the olfactory epithelium transcriptome of a marine fish are associated with a better viral resistance . Preprint , 33p. Publisher's official version : https://doi.org/10.21203/rs.3.rs-1197163/v1 , Open Access version : https://archimer.ifremer.fr/doc/00742/85438/

Mazurais David, Servili Arianna, Noel Cyril, Cormier Alexandre, Collet Sophie, Leseur Romane, Le Roy Maelenn, Vitré Thomas, Madec Lauriane, Zambonino-Infante Jose-Luis (2020). Transgenerational regulation of cbln11 gene expression in the olfactory rosette of the European sea bass (Dicentrarchus labrax) exposed to ocean acidification . Marine Environmental Research , 159, 105022 (11p.) . Publisher's official version : https://doi.org/10.1016/j.marenvres.2020.105022 , Open Access version : https://archimer.ifremer.fr/doc/00630/74169/